LOC113526284 (naaladl2)


Basic Information

Item Value
gene id LOC113526284
gene name naaladl2
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 18166622 ~ 18409057 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU217463
CCAGGTGAGGCAGGACGCAGTTTAGAGTAATTTCTTGACTTCGGAGAAACAGAGAAGTAAATGTGTTCCACGTTCACTGCTTGGCAAGCTATTAGCTAGCCTATTCTCCTGTcaaagacactgagagagacagaggacagCACACACAAGGATCTCATCTCAGCTCAGGTCTTGAAGgtgtggaCATGGCATACAGGAAAGCACTTGCCAGTCATGGTAACCCCATGCACCCTCAGGACCTAGAATGTGAGGATCAGCTGGCCTCTCTTGATCTAGAGTGGGAGATGGAAAAGGAGTTGGAAGAGCCTGGACTGGACAACTTCGAACTAGAATGTGCAGACCCAGAGACCTTGGGCAACTCATCCAGTGGTGAAATGAATCAA
>XM_034308548.1
ACTGCATTCGACTACAGATTTGAGATAACTCTTCTCCGACCAGGACAAGCCAAAGAAAATTGCCCTCAAATTGAAATTCCTTCTTGAGAATTCGGAGCagctatattttttttcacctcatTATGTACCTGTAATGCAGGGATACTAAAAATGAAGTCACTCTGAGCTtcgacttcccacttctgaggtgtggaCATGGCATACAGGAAAGCACTTGCCAGTCATGGTAACCCCATGCACCCTCAGGACCTAGAATGTGAGGATCAGCTGGCCTCTCTTGATCTAGAGTGGGAGATGGAAAAGGAGTTGGAAGAGCCTGGACTGGACAACTTCGAACTAGAATGTGCAGACCCAGAGACCTTGGGCAACTCATCCAGTGGTGAAATGAATCAAGACCAAGAGTTCATCCAGCCCTCTATGTCCCCCCATGGACGGTTCGAGAGACTACAAGAGGACCCCAACTATGTCTTTCAATACAGTGGAACTGTTCCCAAGGTGCACAAGATGAGTGTTACCTGCATTGTCAAATACGTGCTGTTTGGAGCAGGAGCCTTCTGTCTGGGACTGCTCATTGGTCTACATGCTAAGCAAACTGAGGAGCAGCCGGCCACGCCTACCACAAGCACAGATATGCTGGAAAAGGTTATACAAAACATCACTGCAGAGAAGATCCAGGCAGTAAAACGGGAATTTGATTCCTTATCCAGACTCAGTGAGAAAGCCCGGGTGAAGTATCTCGCCCAACGCTGGGAGGAGTTTGGACTGAAGAACGTCCAGATAATCAATTACACCGTCCTCATCAGCTCTCCTGGATCCTTACCGAATACCATCACTGATATGGCAAATAAGCAGTGTTTCCTGCCCAGTGGAGCAAGCTGTGACACAAAGACCACCATATCCATTAATGAGTCCTTTGCCTTTGCAGCCTACTCATCTGTGGGAAGTCTAGAGGCAGAATTGGTGGATGTACAGTATGGAAGTTCTGAAGATTTGAGACTATTCCAAACTGAGATAAACGTGACCAATAAAATAGCACTGCTTAAAATTGGACCAGTACCTTTACTCAATAcgCTTTCTCTCCTGGCTGAGATGGGCTTCGGCGCTTGTCTCATCTATGTGGATCCCTGTGATGTCCCTGGGGATCAGCTCTTACTGCAAAAGGCATTTGGGGTGACGTTAAACCCAGGAGGCGACCCATCAACCCCAGACTACCCTAGCACAGGTCAAAGGATAAAGCTAAGCATCGGATCCCAAACCTCATACAGAACAGTCTATAATGTCATTGGCTACCTGAGAGGAAAGATTAATCCAGataGATACGTCCTCGTTGGCGCTCGTCACAGTAGCTGGTACGAGGGCACCCTGGAAGACTGGAGTGGTGGTGCTGCAGTCGTCTCTCAGATCATTGCCTCCATATCAGCTCAGACTCGTGCACTCTGGCAGCCGGACCGTACTATTGTCTTCTGCTCATTGGGAGGCTCTGCCCTCGGCAACATCGGCTCCTTTGAGTGGGGAGagGCGAACAAGGTGGTTTTGGAGAACAGGGTAGTGGCCTATGTCAGCCTCCATAGTCCAGTTAGAGCATATGGACCACAGTCTACAGCATCACCATCTCTCCTGCAACTGGCTACTGACATCCATAAGAAACATGTAAAAAGTTGCCTTCATCCTGGAGGCTGCCCTGGCCTGAACATCAGCTCTCTGCAGTCTCCTGTGGTCATGGACTTCTTCACCAGTCAGCTTGCTGCCCCACTGGTGGAGTTTGCATCATCTGCCAATTcaactgagAGTGCTCGTTTCCTCTCCGAGGCCTTTTTCCCCTTCGAGTCATCGTTAGCAGAGACCTTGGACCCCGAATTCAGACTTCACGAGACAGTTGCAAAGATGACAGCAGAGGCCCTCCTGCGACTTGCTAATGATCCTGTGCTTCCCTTCTCACCCTTGGACATAGCATTGGACGTTCAAAATAAACTCAAAGCTGACCCCTTAATCAGGCCTGATCTTCTGGCTGCTGCTGCATCCTTGCGAGACAATTCTGGCTTCTTCCAGTCAGAGATTATGCGCCCAGCCAACGACCCGAAGGAGCGCGACCCTTCCCATGTGCGCATGCTGAACGACGTACTGCGAGACCTGGAGAAAAGCTTCCTCATTTCAGACCCACCTCAGGGCTTTTCACGGAACATTCTCTATGGACTGAATAGAAAAACGCAAGGCTTTGCCATCTTGAAGGCCTCTGTGGAAAACTCCAAACACAGCAGCGTGAATCGGTCTTTGTCCCAGGTGTTCAACTCCATCTGCTCGGCTGAAAAGCTTATCCAAAGTGGTCTCGAGCTCTTTGAGAATGACCCTAATAGCTCACATTGAAACAATCGCAGCATAATGCTGCTATTGAAGCTCCGAACGAAACTTCTTCAGGCATGAAAGCAGCACAACTGGAGTACGAGGAGCACACTCAGTTATTGTGTGGTACATGTGACTGAAATCTGTACTTCCAAAGGAATCGGATATTTGAAGCTACTTGTGATCTGGAGATCTTATATGTCCTTTATATCGGTTTCTCACCCGTATGATGGCAGATGAACAAAAATTCTAGTGAAAACTGGTGAACCTGTAGAGAAGGTAAAGCTGTCCCGTAGGCCTGAAGGACAAAATAAGGCACTCCAAGATGGTGCAgactaaaattattttttctgtctctttacctTTCAGTTCCAGGCAAGTAATTCTATAAGATACCATAATTTTGTCCTCAGGGTGACTAAGCATTTTTCAACTCAGGACAGGTAGAAGGAGAATtcttatttgaatgaatttatgttaattaatatttagattttctttattaactgtatatatgtatgtatgtattctCTCATGCACACTCTCTTGCCTTAATTAAGATTTGTAAGAATGCTGTGTAAGAATGACagtttttattgtttgtctCTCTGAAAATTGACTAAGCTGCTAAAAGGGAAATTCTGGCTGCTGAGCTATGACTAGCTAGCAAAATTGGTCCTGTCGAGGCTGTCCTTTGATACTACAATGAACAACCAACCTTAATATTAGCTAGGAAGGCTAATTTTTGTTACACATAACCTTTGGGGCTTTTACTGGTAACAcagtgtataactgtatattgattgtata

Function

symbol description
naaladl2 Predicted to enable metalloexopeptidase activity. Predicted to be involved in proteolysis. Predicted to act upstream of or within response to bacterium. Located in nucleoplasm.

GO: NA

KEGG:

id description
K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
TU217463 False 383 lncRNA 0.49 2 18166622 18237120
XM_034308548.1 True 3150 mRNA 0.46 13 18190616 18409057

Neighbor

gene id symbol gene type direction distance location
nlgn1 nlgn1,LOC107593140,LOC106584306 coding upstream 32641 17878240 ~ 18133981 (+)
phka2 phka2,LOC108439424,LOC107718215,LOC107715813 coding upstream 497490 17648935 ~ 17669132 (+)
senp5 LOC108270997 coding upstream 521510 17638789 ~ 17645112 (+)
cp cp,LOC100533122 coding upstream 621555 17534444 ~ 17545067 (+)
LOC113528887 LOC108271171,LOC108439433 coding upstream 633944 17507207 ~ 17532678 (+)
si:ch211-51h4.2 LOC108442512 coding downstream 18025 18427082 ~ 18551154 (+)
LOC117598435 NA coding downstream 257519 18666576 ~ 18671367 (+)
si:ch211-247n2.1 kcnmb2,LOC108428381 coding downstream 310167 18719224 ~ 18741759 (+)
pik3ca pik3ca,LOC107574159 coding downstream 355042 18764099 ~ 18783878 (+)
LOC113531757 NA coding downstream 377914 18786971 ~ 18794580 (+)
G183585 NA non-coding upstream 250412 17916003 ~ 17916210 (+)
G183578 NA non-coding upstream 263638 17902785 ~ 17902984 (+)
G183566 NA non-coding upstream 278269 17888127 ~ 17888353 (+)
G183478 NA non-coding upstream 441362 17724763 ~ 17725260 (+)
G183058 LOC108270510 non-coding upstream 582837 17577642 ~ 17583785 (+)
G183787 NA non-coding downstream 20449 18429506 ~ 18437961 (+)
G183805 NA non-coding downstream 159568 18568625 ~ 18569959 (+)
G183798 NA non-coding downstream 167675 18576732 ~ 18588716 (+)
G183797 NA non-coding downstream 184641 18593698 ~ 18597240 (+)
G183796 NA non-coding downstream 189661 18598718 ~ 18604922 (+)
G183549 NA other upstream 370003 17795445 ~ 17796619 (+)
ect2 ect2,LOC107674529,LOC107718889 other upstream 384808 17754176 ~ 17781814 (+)
mcf2l2 LOC108270998,LOC108439422,LOC106613920 other upstream 415120 17672171 ~ 17751502 (+)
anos1b LOC108271321,LOC108439428 other upstream 530227 17598464 ~ 17636395 (+)
LOC113536271 ankub1 other upstream 720374 17439796 ~ 17446248 (+)
adgrl4 adgrl4,LOC102783218 other downstream 845874 19254931 ~ 19270261 (+)
smim7 smim7,LOC107568062,LOC107703137,LOC107658516 other downstream 1077271 19486328 ~ 19487784 (+)
LOC113546543 NA other downstream 1117820 19526877 ~ 19548212 (+)
si:ch73-40i7.5 apba3,si:ch73-40i7.5,LOC108271288,LOC107750992,LOC107592849,LOC107661085,LOC105938289,LOC107096970,LOC105910839,LOC106516779,LOC107550530,LOC102779936,LOC101467998 other downstream 1123024 19532081 ~ 19554969 (+)
rps15 rps15,abhd8,LOC107685215,LOC107578086 other downstream 1286170 19695227 ~ 19700274 (+)

Expression


Co-expression Network