ap3d1 (ap3d1,LOC107593327,LOC107676965,LOC107586409)


Basic Information

Item Value
gene id ap3d1
gene name ap3d1,LOC107593327,LOC107676965,LOC107586409
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 16814608 ~ 16847204 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026916547.2
TCAGCCATTTCCTCGAAGGGTCCGCCGCCAGTCGGTGAGTTTGCAGTTACAGGAGGAGGACGGACCCAGCTGGCCTCGCCTTCTCCGGGCTAGGATTAGCAGACGATAGTGTTCTCCTGTGAGGACGGTGCTCAGGTGGATGAAAGCCTGTCTAACGGGCCTGTCAGCTCGGAAAACCCCGCTTGGTCTCCCCGGACAGGAGCGACTGAAGGCTTGGctttgcagcagcagcagcagccatgGCTTTGAAGATCGTTAAAGGGAGCATCGATCGGATGTTCGATAAAAACCTTCAGGACTTAGTACGTGGCATTAGGAACCACAAAGAAGATGAGGCCAAATACATCTCCACATGCATCGATGAGATCAAGCAGGAACTCAAACAGGACAACATTGCCGTCAAAGCCAATGCAGTGTGCAAGCTCACCTACttgCAGATGCTTGGATATGATGTCAGCTGGGCTGCATTCAACATTGTTGAGGTGATGAGCTCTTCTAAATTCACCTACAAgCGAATTGGTTACCTGGCTGCCTCACAGTGCTTTCATGAAGGCACTGATGTCATCATGctgacaaccaatcagattcgcaAGGATCTCAGCAGTCCAAATCAGTATGACACTGGCGTGGCTCTGACTGGCCTCTCCTGCTTCGTGACCCCTGACCTGGCCCGTGACCTAGCCAACGACATTATGACTTTGATGTCCCACACTAAGCCATACATTAGGAAGAAGGCTGTGCTTATAATGTATAAAGTGTTCCTGAAGTACCCCGAGTCCCTGCGCCCTGCCTTCCCCCGTCTCAAAGAGAAACTGGAGGACCCTGACCCAGGTGTGCAGTCAGCAGCAGTTAATGTCATCTGTGAGTTGGCCAGAAGAAACCCCAAGAACTACTTGTCCTTGGCCCCTCTTTTCTTTAAGCTGATGACCTCCTCCACCAACAACTGGGTCCTCATCAAGATCATCAAACTGtttggTGCCCTCACCCCTCTGGAGCCTCGTCTAGGGAAGAAGCTGATTGAGCCCTTAACTAACCTCATCCACAGTACCTCGGCCATGTCACTGCTGTATGAGTGTGTAAACACAGTGATAGCAGTGTTGATTTCTCTGTCCTCTGGGATGCCCAACCACAGTGCTAGCATTCAGCTCTGTGTGCAGAAACTGCGAATCCTGATCGAAGACTCGGACCAGAACTTGAAGTACCTGGGTCTGCTGGCTATGTCCAAGATCCTTAAGACGCACCCGAAGTCCGTGCAGTCACACAAGGACCTGATCCTGCAGTGTCTGGATGACAAGGACGAGTCCATCCGACTGAGGGCACTGGATCTTCTCTATGGCATGGTCTCTAAGAAGAACCTGATGGAGATTGTAAAGAAGCTGATGCTGCATGTAGATAAGGCTGAAGGCACCACGTATAGGGATGAGCTGCTAACCAAGATAATTGACATTTGCAGCCAGAGCAACTACCAGTACATCACTAACTTTGAGTGGTATATTAGCATTCTGGTGGAGCTAACACGGCTTGAGGGCACCCGGCATGGTCATCTCATTGCCTCTCAGATGCTGGATGTGGCCATCCGTGTGAAGGCCATCCGAGCATTTGCTGTGGCTCAGATGGCCATGCTGTTGGATAACGCACACCTGCTGACAGGCAACATGCAACGCAATGGCATCTGCGAGGTCCTCTATGCTGCCGCATGGATCTGCGGGGAATTCTCTGAGCACCTGGAAGACCCCATGCAGACACTGGAGGCCATGTTGCGGCCCAAAGTGGCAACTTTGCCAGGCCACATCCAGGCTGTATATGTGCAGAATGCTGCGAAGCTATTTGCAACATTGCTGCAGAAACATGAGGGGACAGAAGACAGCCAGGTTGCCCAGGAGGCTAGCCAACTGCTCATAGAGAGACTGCCTCTGTTCGTCCAGAGTGCTAACCTGGAAGTGCAGGAGAGGGCATCCTGTATTCTACAGCTGGTGAAATATATTCAGAAGCTGCAGCAGAAGGATGTGGAAGTAGCTGAGGAGGTATCTGCACTATTTGCAGGAGAACTTAACCCTGTGGCTCCTAAAGCTCAGAAGAAAGTGCCTGTGCCTGAAGGACTGGACCTGGATGCCTGGATCAATGAACCTCCATCTGAGAGCGAGTCTGAGGATGAGAAGCCCAAGACTTTGTTTGCTAAAGAGGAGACCAAGCACTCTCGACCTCGCCACACTGAAGTGGACGAGAAAGAGCTGGCAAGGAGAAGGGAAGCCAGGAAGCAGGAACAAGCCAACAACCCCTTCTACATTAAATCCTCTCCATCCACTCAGAAGGTGTATCAGGACGCGCCAGGTGTAGAGCACATTCCAGTGGTACAGATTGACCTCAGTGTGCCACTCAAGGTCCCAGggaTGCCCATGTCTGACCAGTACCTGAAGCTGGAGGAGGAGcgtcggcagaaggagaaggcggagaagaagaagaaagagaaaaagaagaagaaagagaagcgTGGGAAGGGGAAGAGAGATGACTCGGGACCTGAGAGTGAGGAAGATATCACACCTGCTCACCAGGTGGACATCGTCACTGAGGAGATGCCAGAGAATGCCTTACcaagtgatgatgatgacaaagACCCCAATGATCCACATAAAGCTCTGGACATCGATTTAGACAAGCCCCTGGCAGACAGTGAGAAGCTGCCGGTGAGGACACACCGCCCTGAGGTTGTTAAGAGCCCTGGGGCAGATGAAGACGGAGAGGGTTTCCATCAGGAGCCTAAGAAGAGGAGCAgcaaggagaagaaagagaagaagaaggacaaGGATAAGGACAGGAAGAAGAgcaaagaggaagagaagaagaaaaagaagaagaaacacaaaaatgatgTGGAGGAAGAACCAGTGGAGCCTCACTCAGAAAATCCAGTGCAGTTAGAAGAGACCAGTGTGGTGGCGGCCCCACCTACCTCCACATCTGCCGAGGCCTCCGATTTGGATTTCTGGCTCTCTAGTGCTCCTGTTCCCCAACCTGCCAAGgagGCAGCGGTTCCACCATCAGCCCCAGCCCCAGCCCCTGAGACAAGTGTAGCTGCAGCCCCAGATTCTGAATCAGACGAGCCCAAAGATGAAGAACCCGAAGAGATGAAATCATCTAAACataagaagaaaaagcagaagaaagaaaaggaaaaggatgaaaaggagaagaagaagaaaaagcgccatcatcaccaccaccaccaccaccacagtgAGGGAGACGGGAGGGATTCGGTACAGAATGgcacagtggaggaggaggagcctCTACCGCCCATGTCAAACTACTGTCTCCTGGCTGAAAACACATACATTAAAATGGTGTACGATATTCAGGGAAATTTGCAGGATGGCAGTCAGGTCGTGGTGTCTGTCATCTTTGAGAACAAGAGCAACAGTTTCCTCAAGTCCATGGAGTTCAATGTGCTGGACTCCCTCAACTCAAAACTACAGCGGCCGGATGGAGCTGGACCCCATGATGGGCTCGTCGTGCCCTTCCAGCTGCCTCCAGGGGTGTCAAATGAGGCCCGTTTCGTGTTCTCAGTGCAGAGCATTGTCATGCCTCAGAAACTGAAGGGGACCCTCACCTTCATAGTAAAGTCGGAGGAGTCCTCAACTCATGAGAAACTGGACTTCAAACTGCACTTTACCTGCACATCATACCTAATCACAACTCCATGCTACAGCGATGCCTACGCCAAGCTGCTGGAGTCTGGGGACCTAAAGAGCAGCTTTCTGAAGCTGGAGGGAGTCAACATGCCTTTCCACCACCTGTTGGCTAGAATCTGCTTCCATCACCATTTCTCTGTTGTGGAGAGGATCGACTCGTGTGCCTCCATGTACAGCAGGTCAATCCAGGGTCACCATGTCTGTTTGCTGGTCAAAACCGCTGATCAGACAGTCTCCATTGATGCTAAATGTGATGAGCCATCACTGCTGGGGAATGTGCTGGAAGAGATAAAGCAGACCTTCTCACAATGCTGATTGTGTCTGAGAGACCAACGGTGCCCTTGACCTCCCTCTCCCATGCCCTCTTGCTGAATCTGACACTCAGAATCATATCACAAACACTGAGGCTGGTTTCTCCCTCGTCTCTACCTACCTTATATTTATTGGAACTCTCGACTCGATTTATCTTTCTCTTGtattcctctctcttttttttctttctagtcTTCGTGTCAGCCTCAGTCTGGTGTTCGATCTCACTAACCTTCCTTCAGTTTATTAACTggatttatttgttgttttaatgttggttgatacattttttttgtattgtgttgcattttgtttgttgctttctttcattttggtGTTCTCTCTGCGTCTTTGTTGAATCTTCGAATTAAACTTGAGTTTAGTGTCTTCCTcctcagtcagtctgtgtgcgtgtgtctgtgtgcgtgtgtctgtgtgcgtgtgtctgtgtgcgtgtgtctgtgtgcgggTGTCTGTGTgcggtgtgtctgtgtgcgggTGTC
>XM_026916555.2
TCAGCCATTTCCTCGAAGGGTCCGCCGCCAGTCGGTGAGTTTGCAGTTACAGGAGGAGGACGGACCCAGCTGGCCTCGCCTTCTCCGGGCTAGGATTAGCAGACGATAGTGTTCTCCTGTGAGGACGGTGCTCAGGTGGATGAAAGCCTGTCTAACGGGCCTGTCAGCTCGGAAAACCCCGCTTGGTCTCCCCGGACAGGAGCGACTGAAGGCTTGGctttgcagcagcagcagcagccatgGCTTTGAAGATCGTTAAAGGGAGCATCGATCGGATGTTCGATAAAAACCTTCAGGACTTAGTACGTGGCATTAGGAACCACAAAGAAGATGAGGCCAAATACATCTCCACATGCATCGATGAGATCAAGCAGGAACTCAAACAGGACAACATTGCCGTCAAAGCCAATGCAGTGTGCAAGCTCACCTACttgCAGATGCTTGGATATGATGTCAGCTGGGCTGCATTCAACATTGTTGAGGTGATGAGCTCTTCTAAATTCACCTACAAgCGAATTGGTTACCTGGCTGCCTCACAGTGCTTTCATGAAGGCACTGATGTCATCATGctgacaaccaatcagattcgcaAGGATCTCAGCAGTCCAAATCAGTATGACACTGGCGTGGCTCTGACTGGCCTCTCCTGCTTCGTGACCCCTGACCTGGCCCGTGACCTAGCCAACGACATTATGACTTTGATGTCCCACACTAAGCCATACATTAGGAAGAAGGCTGTGCTTATAATGTATAAAGTGTTCCTGAAGTACCCCGAGTCCCTGCGCCCTGCCTTCCCCCGTCTCAAAGAGAAACTGGAGGACCCTGACCCAGGTGTGCAGTCAGCAGCAGTTAATGTCATCTGTGAGTTGGCCAGAAGAAACCCCAAGAACTACTTGTCCTTGGCCCCTCTTTTCTTTAAGCTGATGACCTCCTCCACCAACAACTGGGTCCTCATCAAGATCATCAAACTGtttggTGCCCTCACCCCTCTGGAGCCTCGTCTAGGGAAGAAGCTGATTGAGCCCTTAACTAACCTCATCCACAGTACCTCGGCCATGTCACTGCTGTATGAGTGTGTAAACACAGTGATAGCAGTGTTGATTTCTCTGTCCTCTGGGATGCCCAACCACAGTGCTAGCATTCAGCTCTGTGTGCAGAAACTGCGAATCCTGATCGAAGACTCGGACCAGAACTTGAAGTACCTGGGTCTGCTGGCTATGTCCAAGATCCTTAAGACGCACCCGAAGTCCGTGCAGTCACACAAGGACCTGATCCTGCAGTGTCTGGATGACAAGGACGAGTCCATCCGACTGAGGGCACTGGATCTTCTCTATGGCATGGTCTCTAAGAAGAACCTGATGGAGATTGTAAAGAAGCTGATGCTGCATGTAGATAAGGCTGAAGGCACCACGTATAGGGATGAGCTGCTAACCAAGATAATTGACATTTGCAGCCAGAGCAACTACCAGTACATCACTAACTTTGAGTGGTATATTAGCATTCTGGTGGAGCTAACACGGCTTGAGGGCACCCGGCATGGTCATCTCATTGCCTCTCAGATGCTGGATGTGGCCATCCGTGTGAAGGCCATCCGAGCATTTGCTGTGGCTCAGATGGCCATGCTGTTGGATAACGCACACCTGCTGACAGGCAACATGCAACGCAATGGCATCTGCGAGGTCCTCTATGCTGCCGCATGGATCTGCGGGGAATTCTCTGAGCACCTGGAAGACCCCATGCAGACACTGGAGGCCATGTTGCGGCCCAAAGTGGCAACTTTGCCAGGCCACATCCAGGCTGTATATGTGCAGAATGCTGCGAAGCTATTTGCAACATTGCTGCAGAAACATGAGGGGACAGAAGACAGCCAGGTTGCCCAGGAGGCTAGCCAACTGCTCATAGAGAGACTGCCTCTGTTCGTCCAGAGTGCTAACCTGGAAGTGCAGGAGAGGGCATCCTGTATTCTACAGCTGGTGAAATATATTCAGAAGCTGCAGCAGAAGGATGTGGAAGTAGCTGAGGAGGTATCTGCACTATTTGCAGGAGAACTTAACCCTGTGGCTCCTAAAGCTCAGAAGAAAGTGCCTGTGCCTGAAGGACTGGACCTGGATGCCTGGATCAATGAACCTCCATCTGAGAGCGAGTCTGAGGATGAGAAGCCCAAGACTTTGTTTGCTAAAGAGGAGACCAAGCACTCTCGACCTCGCCACACTGAAGTGGACGAGAAAGAGCTGGCAAGGAGAAGGGAAGCCAGGAAGCAGGAACAAGCCAACAACCCCTTCTACATTAAATCCTCTCCATCCACTCAGAAGGTGTATCAGGACGCGCCAGGTGTAGAGCACATTCCAGTGGTACAGATTGACCTCAGTGTGCCACTCAAGGTCCCAGggaTGCCCATGTCTGACCAGTACCTGAAGCTGGAGGAGGAGcgtcggcagaaggagaaggcggagaagaagaagaaagagaaaaagaagaagaaagagaagcgTGGGAAGGGGAAGAGAGATGACTCGGGACCTGAGAGTGAGGAAGATATCACACCTGCTCACCAGGTGGACATCGTCACTGAGGAGATGCCAGAGAATGCCTTACcaagtgatgatgatgacaaagACCCCAATGATCCACATAAAGCTCTGGACATCGATTTAGACAAGCCCCTGGCAGACAGTGAGAAGCTGCCGGTGAGGACACACCGCCCTGAGGTTGTTAAGAGCCCTGGGGCAGATGAAGACGGAGAGGGTTTCCATCAGGAGCCTAAGAAGAGGAGCAgcaaggagaagaaagagaagaagaaggacaaGGATAAGGACAGGAAGAAGAgcaaagaggaagagaagaagaaaaagaagaagaaacacaaaaatgatgTGGAGGAAGAACCAGTGGAGCCTCACTCAGAAAATCCAGTGCAGTTAGAAGAGACCAGTGTGGTGGCGGCCCCACCTACCTCCACATCTGCCGAGgagGCAGCGGTTCCACCATCAGCCCCAGCCCCAGCCCCTGAGACAAGTGTAGCTGCAGCCCCAGATTCTGAATCAGACGAGCCCAAAGATGAAGAACCCGAAGAGATGAAATCATCTAAACataagaagaaaaagcagaagaaagaaaaggaaaaggatgaaaaggagaagaagaagaaaaagcgccatcatcaccaccaccaccaccaccacagtgAGGGAGACGGGAGGGATTCGGTACAGAATGgcacagtggaggaggaggagcctCTACCGCCCATGTCAAACTACTGTCTCCTGGCTGAAAACACATACATTAAAATGGTGTACGATATTCAGGGAAATTTGCAGGATGGCAGTCAGGTCGTGGTGTCTGTCATCTTTGAGAACAAGAGCAACAGTTTCCTCAAGTCCATGGAGTTCAATGTGCTGGACTCCCTCAACTCAAAACTACAGCGGCCGGATGGAGCTGGACCCCATGATGGGCTCGTCGTGCCCTTCCAGCTGCCTCCAGGGGTGTCAAATGAGGCCCGTTTCGTGTTCTCAGTGCAGAGCATTGTCATGCCTCAGAAACTGAAGGGGACCCTCACCTTCATAGTAAAGTCGGAGGAGTCCTCAACTCATGAGAAACTGGACTTCAAACTGCACTTTACCTGCACATCATACCTAATCACAACTCCATGCTACAGCGATGCCTACGCCAAGCTGCTGGAGTCTGGGGACCTAAAGAGCAGCTTTCTGAAGCTGGAGGGAGTCAACATGCCTTTCCACCACCTGTTGGCTAGAATCTGCTTCCATCACCATTTCTCTGTTGTGGAGAGGATCGACTCGTGTGCCTCCATGTACAGCAGGTCAATCCAGGGTCACCATGTCTGTTTGCTGGTCAAAACCGCTGATCAGACAGTCTCCATTGATGCTAAATGTGATGAGCCATCACTGCTGGGGAATGTGCTGGAAGAGATAAAGCAGACCTTCTCACAATGCTGATTGTGTCTGAGAGACCAACGGTGCCCTTGACCTCCCTCTCCCATGCCCTCTTGCTGAATCTGACACTCAGAATCATATCACAAACACTGAGGCTGGTTTCTCCCTCGTCTCTACCTACCTTATATTTATTGGAACTCTCGACTCGATTTATCTTTCTCTTGtattcctctctcttttttttctttctagtcTTCGTGTCAGCCTCAGTCTGGTGTTCGATCTCACTAACCTTCCTTCAGTTTATTAACTggatttatttgttgttttaatgttggttgatacattttttttgtattgtgttgcattttgtttgttgctttctttcattttggtGTTCTCTCTGCGTCTTTGTTGAATCTTCGAATTAAACTTGAGTTTAGTGTCTTCCTcctcagtcagtctgtgtgcgtgtgtctgtgtgcgtgtgtctgtgtgcgtgtgtctgtgtgcgtgtgtctgtgtgcgggTGTCTGTGTgcggtgtgtctgtgtgcgggTGTC
>XM_026916562.2
TAAGCCATACATTAGGAAGAAGGCTGTGCTTATAATGTATAAAGTGTTCCTGAAGTACCCCGAGTCCCTGCGCCCTGCCTTCCCCCGTCTCAAAGAGAAACTGGAGGACCCTGACCAGGTGTGCAGTCAGCAGCAGTTAATGTCATCTGTGAGTTGGCCAGAAGAAACCCCAAGAACTACTTGTCCTTGGCCCCTCTTTTCTTTAAGCTGATGACCTCCTCCACCAACAACTGGGTCCTCATCAAGATCATCAAACTGtttggTGCCCTCACCCCTCTGGAGCCTCGTCTAGGGAAGAAGCTGATTGAGCCCTTAACTAACCTCATCCACAGTACCTCGGCCATGTCACTGCTGTATGAGTGTGTAAACACAGTGATAGCAGTGTTGATTTCTCTGTCCTCTGGGATGCCCAACCACAGTGCTAGCATTCAGCTCTGTGTGCAGAAACTGCGAATCCTGATCGAAGACTCGGACCAGAACTTGAAGTACCTGGGTCTGCTGGCTATGTCCAAGATCCTTAAGACGCACCCGAAGTCCGTGCAGTCACACAAGGACCTGATCCTGCAGTGTCTGGATGACAAGGACGAGTCCATCCGACTGAGGGCACTGGATCTTCTCTATGGCATGGTCTCTAAGAAGAACCTGATGGAGATTGTAAAGAAGCTGATGCTGCATGTAGATAAGGCTGAAGGCACCACGTATAGGGATGAGCTGCTAACCAAGATAATTGACATTTGCAGCCAGAGCAACTACCAGTACATCACTAACTTTGAGTGGTATATTAGCATTCTGGTGGAGCTAACACGGCTTGAGGGCACCCGGCATGGTCATCTCATTGCCTCTCAGATGCTGGATGTGGCCATCCGTGTGAAGGCCATCCGAGCATTTGCTGTGGCTCAGATGGCCATGCTGTTGGATAACGCACACCTGCTGACAGGCAACATGCAACGCAATGGCATCTGCGAGGTCCTCTATGCTGCCGCATGGATCTGCGGGGAATTCTCTGAGCACCTGGAAGACCCCATGCAGACACTGGAGGCCATGTTGCGGCCCAAAGTGGCAACTTTGCCAGGCCACATCCAGGCTGTATATGTGCAGAATGCTGCGAAGCTATTTGCAACATTGCTGCAGAAACATGAGGGGACAGAAGACAGCCAGGTTGCCCAGGAGGCTAGCCAACTGCTCATAGAGAGACTGCCTCTGTTCGTCCAGAGTGCTAACCTGGAAGTGCAGGAGAGGGCATCCTGTATTCTACAGCTGGTGAAATATATTCAGAAGCTGCAGCAGAAGGATGTGGAAGTAGCTGAGGAGGTATCTGCACTATTTGCAGGAGAACTTAACCCTGTGGCTCCTAAAGCTCAGAAGAAAGTGCCTGTGCCTGAAGGACTGGACCTGGATGCCTGGATCAATGAACCTCCATCTGAGAGCGAGTCTGAGGATGAGAAGCCCAAGACTTTGTTTGCTAAAGAGGAGACCAAGCACTCTCGACCTCGCCACACTGAAGTGGACGAGAAAGAGCTGGCAAGGAGAAGGGAAGCCAGGAAGCAGGAACAAGCCAACAACCCCTTCTACATTAAATCCTCTCCATCCACTCAGAAGGTGTATCAGGACGCGCCAGGTGTAGAGCACATTCCAGTGGTACAGATTGACCTCAGTGTGCCACTCAAGGTCCCAGggaTGCCCATGTCTGACCAGTACCTGAAGCTGGAGGAGGAGcgtcggcagaaggagaaggcggagaagaagaagaaagagaaaaagaagaagaaagagaagcgTGGGAAGGGGAAGAGAGATGACTCGGGACCTGAGAGTGAGGAAGATATCACACCTGCTCACCAGGTGGACATCGTCACTGAGGAGATGCCAGAGAATGCCTTACcaagtgatgatgatgacaaagACCCCAATGATCCACATAAAGCTCTGGACATCGATTTAGACAAGCCCCTGGCAGACAGTGAGAAGCTGCCGGTGAGGACACACCGCCCTGAGGTTGTTAAGAGCCCTGGGGCAGATGAAGACGGAGAGGGTTTCCATCAGGAGCCTAAGAAGAGGAGCAgcaaggagaagaaagagaagaagaaggacaaGGATAAGGACAGGAAGAAGAgcaaagaggaagagaagaagaaaaagaagaagaaacacaaaaatgatgTGGAGGAAGAACCAGTGGAGCCTCACTCAGAAAATCCAGTGCAGTTAGAAGAGACCAGTGTGGTGGCGGCCCCACCTACCTCCACATCTGCCGAGGCCTCCGATTTGGATTTCTGGCTCTCTAGTGCTCCTGTTCCCCAACCTGCCAAGgagGCAGCGGTTCCACCATCAGCCCCAGCCCCAGCCCCTGAGACAAGTGTAGCTGCAGCCCCAGATTCTGAATCAGACGAGCCCAAAGATGAAGAACCCGAAGAGATGAAATCATCTAAACataagaagaaaaagcagaagaaagaaaaggaaaaggatgaaaaggagaagaagaagaaaaagcgccatcatcaccaccaccaccaccaccacagtgAGGGAGACGGGAGGGATTCGGTACAGAATGgcacagtggaggaggaggagcctCTACCGCCCATGTCAAACTACTGTCTCCTGGCTGAAAACACATACATTAAAATGGTGTACGATATTCAGGGAAATTTGCAGGATGGCAGTCAGGTCGTGGTGTCTGTCATCTTTGAGAACAAGAGCAACAGTTTCCTCAAGTCCATGGAGTTCAATGTGCTGGACTCCCTCAACTCAAAACTACAGCGGCCGGATGGAGCTGGACCCCATGATGGGCTCGTCGTGCCCTTCCAGCTGCCTCCAGGGGTGTCAAATGAGGCCCGTTTCGTGTTCTCAGTGCAGAGCATTGTCATGCCTCAGAAACTGAAGGGGACCCTCACCTTCATAGTAAAGTCGGAGGAGTCCTCAACTCATGAGAAACTGGACTTCAAACTGCACTTTACCTGCACATCATACCTAATCACAACTCCATGCTACAGCGATGCCTACGCCAAGCTGCTGGAGTCTGGGGACCTAAAGAGCAGCTTTCTGAAGCTGGAGGGAGTCAACATGCCTTTCCACCACCTGTTGGCTAGAATCTGCTTCCATCACCATTTCTCTGTTGTGGAGAGGATCGACTCGTGTGCCTCCATGTACAGCAGGTCAATCCAGGGTCACCATGTCTGTTTGCTGGTCAAAACCGCTGATCAGACAGTCTCCATTGATGCTAAATGTGATGAGCCATCACTGCTGGGGAATGTGCTGGAAGAGATAAAGCAGACCTTCTCACAATGCTGATTGTGTCTGAGAGACCAACGGTGCCCTTGACCTCCCTCTCCCATGCCCTCTTGCTGAATCTGACACTCAGAATCATATCACAAACACTGAGGCTGGTTTCTCCCTCGTCTCTACCTACCTTATATTTATTGGAACTCTCGACTCGATTTATCTTTCTCTTGtattcctctctcttttttttctttctagtcTTCGTGTCAGCCTCAGTCTGGTGTTCGATCTCACTAACCTTCCTTCAGTTTATTAACTggatttatttgttgttttaatgttggttgatacattttttttgtattgtgttgcattttgtttgttgctttctttcattttggtGTTCTCTCTGCGTCTTTGTTGAATCTTCGAATTAAACTTGAGTTTAGTGTCTTCCTcctcagtcagtctgtgtgcgtgtgtctgtgtgcgtgtgtctgtgtgcgtgtgtctgtgtgcgtgtgtctgtgtgcgggTGTCTGTGTgcggtgtgtctgtgtgcgggTGTC

Function

symbol description
ap3d1 Predicted to be involved in several processes, including Golgi to vacuole transport; establishment of protein localization to vacuole; and synaptic vesicle transport. Predicted to act upstream of or within intracellular protein transport and vesicle-mediated transport. Predicted to be located in membrane. Predicted to be part of AP-3 adaptor complex. Predicted to be active in endosome membrane; presynaptic endosome; and terminal bouton. Human ortholog(s) of this gene implicated in Hermansky-Pudlak syndrome. Orthologous to human AP3D1 (adaptor related protein complex 3 subunit delta 1).

NR:

description
PREDICTED: AP-3 complex subunit delta-1 isoform X1

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0016192 vesicle-mediated transport biological_process
GO:0030117 membrane coat cellular_component

KEGG:

id description
K12396 AP3D; AP-3 complex subunit delta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026916547.2 True 4510 mRNA 0.50 33 16814608 16847204
XM_026916555.2 False 4456 mRNA 0.50 32 16814608 16847204
XM_026916562.2 False 3797 mRNA 0.50 28 16826661 16847204

Neighbor

gene id symbol gene type direction distance location
hdgfl2 hdgfrp2,LOC108270897,LOC108430101,LOC107676974,LOC107717991 coding upstream 362 16801804 ~ 16814246 (+)
chaf1a chaf1a coding upstream 28409 16774458 ~ 16786199 (+)
unc13a LOC108270949,LOC108430111 coding upstream 164493 16606126 ~ 16650115 (+)
hmg20b hmg20b,LOC107586380,LOC107719660,LOC107655186,LOC107729671 coding upstream 211846 16597960 ~ 16602762 (+)
LOC113544157 LOC108271000,LOC108435918,LOC107096963,LOC108239462,LOC107724979,LOC102796634,LOC107552698,LOC105011544 coding upstream 231825 16577534 ~ 16582783 (+)
LOC113532286 LOC108270593,LOC108430073,LOC107719667,LOC100332608,LOC107699403,LOC107593325,LOC107676991,LOC107586464 coding downstream 11723 16858927 ~ 16862149 (+)
LOC113527868 LOC108271202,LOC108430096,LOC105011594,LOC107717982,LOC107699416,LOC106584406,LOC106613802,LOC107586405 coding downstream 65368 16912572 ~ 16947458 (+)
tle5 aes,LOC108271216,LOC108430095,LOC107593322,LOC107586404 coding downstream 102544 16949748 ~ 16975577 (+)
tle2b LOC108271164,LOC108430094,LOC107676970,LOC107719559 coding downstream 152901 17000105 ~ 17066956 (+)
trnak-cuu_26 NA coding downstream 182668 17029872 ~ 17029944 (+)
LOC117598408 zbtb7a,LOC108270628 non-coding upstream 89081 16708625 ~ 16725527 (+)
G182483 NA non-coding upstream 554292 16260058 ~ 16260316 (+)
G182190 NA non-coding upstream 805373 16006054 ~ 16009235 (+)
G182116 NA non-coding upstream 824198 15988630 ~ 15990410 (+)
G182115 NA non-coding upstream 826627 15938100 ~ 15987981 (+)
LOC117598387 NA non-coding downstream 5204 16852408 ~ 16857137 (+)
G182906 NA non-coding downstream 113455 16960659 ~ 16961299 (+)
G182910 NA non-coding downstream 142115 16989319 ~ 16989519 (+)
G182932 NA non-coding downstream 232433 17079637 ~ 17083529 (+)
LOC113535983 NA non-coding downstream 569526 17416730 ~ 17423320 (+)
G182819 NA other upstream 229665 16583303 ~ 16584943 (+)
LOC113532318 NA other upstream 557826 16255047 ~ 16256782 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 1140626 15668798 ~ 15673982 (+)
pdzk1ip1 NA other upstream 2102881 14708927 ~ 14711727 (+)
si:dkey-121a11.3 LOC108270690,LOC107588106,LOC107592730 other upstream 2164923 14622543 ~ 14649685 (+)
G182877 NA other downstream 66054 16913258 ~ 16922922 (+)
si:ch211-126j24.1 LOC108270963,LOC108411470,LOC107550685,LOC107588448,LOC107697062 other downstream 274695 17121899 ~ 17189315 (+)
LOC113528769 klc4 other downstream 349076 17196280 ~ 17222532 (+)
kcnh1b kcnh1b,LOC108270513,LOC108411957,LOC107689936,LOC107753489,LOC107570545,LOC105026838,LOC103369331,LOC106564801 other downstream 518494 17365698 ~ 17411425 (+)
LOC113536271 ankub1 other downstream 592592 17439796 ~ 17446248 (+)

Expression


Co-expression Network