mpv17l2 (mpv17l2)


Basic Information

Item Value
gene id mpv17l2
gene name mpv17l2
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 19300621 ~ 19309461 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026928468.2
GGAAGACTAGCGTTTCCTGTCTGCGAAATGAACCATTCATTAACAAATGTCAAGACATGCTGCTGACAGCGTgtgttagttttgttttgtgtttgaagTTATTTGGACGGGAGAATTTGGTGTTGttgtagtaatattttattgtaaatgatCTTACACTCCTCGGACACAGCAGGCTAGCTAGTCATGATCCCTCAGAGTAAGAGCCTGCTCGTGCGGATAGCTTTCTACTGGAAGCCGCTTTTCTCGGGGAAGTACCTGATAGTGACGAACATAGTGAGTAGTGGAGGCATGCTTGCTCTTGGGGACTGCATTCAGCAgagcagagagaagagacaCAGTCCGGCTAAGACCCGGGACTGGCAGCGCACAGGGCGCATGTTTGCAGTTGGATGTACCATGGGACCGTTTATGCACTACTGGTACCAGTGGTTGGACAGGGTTTATTCGGGAAAAATGGTAAAGGCAGTTGCCAAGAAAGTCTTGATAGACCAGCTTGTTGCCTCACCACTTTTTGGAGCATGGTACTTCGTAGGTATGGGCCTGATGGAGGGTCACGGCTGGCTCAAAGGCTGCACTGAGTTTAAAGAGAAATTCTGGGAGTTCTATAAGGCGGACTGGTGTGTCTGGCCGACTGCACAGATGATCAACTTCTACTTCTTGCCAGCTAAATTTCGGGTGTTGTATGTAAATACAATTACACTGGGATGGGACACCTACCTCTCATATCTCAAGCACAGGGAAAGCCAACAAATGGATGAATTGGGACCAGAGGACTCATCAATGTCTCCTCCCTCAGCTAAACCACTGGATGATAAACTATAGTCCCACACtaatttcagtttaaatttGAGATTTTAGATATTATTACATGATTCTTTTACTACTTAGACCTATAACTGACTTAATCAATTACTCAAATCAGTCATTCGAATCAGTGTGTCAGCTAAATGAGTTCATACACCTGTACTGAACCTTATCAGGAGTTCTCAGAACATGTCTAGACATGTTCTCACTGGTGAAGGGAATTCTGTTTTCAGTGTCATTTGGCGCAGCTCACCAATAATATAAACTCACGGGCCACTTaattaggaacaccatactacTAGTGGGTAGTAACCCCCTTTGCTCTCAGGCCTCAGTTCTTCATTGCaaggattccacaagatgttagaaacattcctttgagattctggtccatgtgaAATGATTGCATCATATAActggcagatttttcaggtgcactttcatgctgtgagtctcctgttctaccacatcccaaaggtgttctattggattcaaaTCTGCTGACTGGGGAAGCCATTGAAGTATAACACTGAAGTACAGTAATCTCAcggtcatgttcatgaaactagtttgagatgactttgtTACATGgcgcattatcatgctggaagcagCCATTATAAGATAAGTAAATTGTAGCCATAGAAGGATGCACAAGGTCAGCAACAGTACTcgggctgtggcattcaaatgatTGTTATTAAGGGGCCCAATGTGTTTCACCAGCAGCCTAAACTGTTAATAGAAGGCAGGTTGCTtacatggattcatgctgttgacaccaaattctgaccctaccatctgcatgtGGCAGCAGAAATTAAGATTCCTCAGACCAAGTGAAGCTGTTCCATTTTTCAACTGTAGCAGAACCTGAtgaggtcttctgctgctgtagcccatctgcatCAAGGTTCAACAttatgtgcattctgagatgcttttcttttcatcacagttgtaaagagtgattatttgagctaCTGTAGCCTTACTGCCAACTTGAACTTGTCTTAGACCTCTCTCAGGAGTTTCTGCCCTGAAAACTGCCATTCCttagttttttttgtaccattctgtggaatttctagagactgttctgtgtgacaaccatgccacagtcgaAGTgcctgaaatcacatttttcccctgttctgatgtttgatgtcaactgaaactcttgacctgtgtgtgcatggttttatgcattccacttctgccacatgattggctgattggataactgcgtGAATGAGCAGGAGTACAAGTGCTCCTAATTAAGTGGCCGGCAAGTACATTAGACTGCATGCTGGACATCTTCAAAAAGTAGCAGTGCAGTGGATTTTTCCTCTTATGCtgcctcatacacacagctgagagtcaAACACACGTCTCACCATTCACGCTAACTCACAGCACAGACGTTTTCATTGAAGTTTTTGATGAGGTCACACTGCAAGAGTAGCAGCATTGCCTACatctacaaaaatataaaatgaaaggtCATGAGGTTAAATAGAAACTGTTCATAATGAAGACTGTACATCACTAATGCTCACAGTGTAAAAGTTCAACTGAAAAGATGCCTCCATCTAAAAGAAGTCTGAATCATGTCATTTGTTCTCTGCTGCTGAGAGTGTAGAATGATTACAGTATAAATCAAGTAGCACCAGCACAGCAGTTAAGGTTCTGTGCTAATGACCAGCAGGTTGTGATTTTAAACACCAAGAGAGCCAGTTTCAGCCTCCAGGAGGTACCTTCAATCTCATCAAGAATAAttgaacagatttatttcaccatgaaggaaaaaaagattttggctAAATGCCAGTTTTGCCTGTTTAATTGGCAAAGATTTAGATcaataaaacaagcaaacatttttttatctgAAGAAAAGACCTTGTGTAGTAGtgtgaaatgaagaaaagatAAAATGGTGTTTGATATTGATTAAGACTTTGGGGTTTTGGGGATAAGACTTAGATTTCAGTGCTTGTTCTAGTTTTCTAGCTGGTAATGGTGGACTGCGTTTAAAAGGCGTGTCTTCAGGTCTAGCTTTGAAGACATGCCTTTTAAACGCCATTgctttaaaatagattttaactTGTTTTATTATGCCAAAGTAAATAAGCAGTACAGTGTTCCAGGCCCAGTGTGGGGCTGTGGATTATTATATGTCTAAATTGTAACTTCTGAAATCAAACTTGATGCCTGCAGCTGAAGTGTAGTTCTGTTACAGTGTGCAGTTCTAAGGAATTTTGCTCAACTACCTGTAACACTCCACCCCTGTCTTATTTCAGTGATTTGTGCAGATATTTGCTACTCTGCATTTCTGATaattatacttttattacaAATGATAAAAACAGTTGCATGAATTGTTAGTGTTAAATACTATTTTTGAAGATTTGTGTGGAAatgatttttgtttgctttgatttGACTCCTTTGCCTTAATTTCTTCCAGGCCGACTGTTTTACAAGCAACTCTGCTACTGTTGCAGTTTTTATGAGaggatatacactcactgtccactgtATTAAGAACACATGTACAACTCCacttcatgcaattatccaatcagccaatcatgtggcagcagcacaaggcAGAAGATCCTGCAGctacaggtcaggagcttcagttaatgttcacatcatacgtcagaatggggaaaaaatgtgcagGGTTTGGCGAGTTGTGcagtctgagatgcttttctgctcaccacggttggaaagagtggttgtttgagttactgtagcctttttgTCAGCTTGAGCCTGCTGAATCTGGCCATCCTCCTCAGATGTCTCTCATTAATAGGGTGATTCCGCTCACAGAACTGCCCCTCACTGGatcaccattctgagtaaacgctagagactgttgtgtgtgaaaatcccaggagatcagcagttatagaaatactcaaaccagcctgtctggtaccaacaatcatgccatagtcaaaatcactgagatcacatttttcccccattctgacgGTTGATTTCAACATTACcagaagctgctggcccgtatctacatgattttatgcattgtactgctgccacatgattggctgattagataattgcgtgaatgagtagatgtacaggtgttcctaataaattggatGGTGTTTGTAAATGCATCATGCATTGATCATTGAAAACCTCTTTACACTCTTCTCTTGATCACATATGTTGGGAACATATGTGTTGctatgctattattattatcattattataagtATCTTGTGTTCCCCTCCTGTGATGGGTGGCTGGCTGCTGATCCTGCTGTTTATTATAACTGTTACAGCTCTATACTGTAAACATGCTATGTATGTACAATATATAGAAGTGACAGATATCTGTCCTGTACTTTTATGTGCAATGTTATCCAAATAGTAATTACCCTTACACTGGTTCTGCTCTGGTGTGTTCATCTGTGTTTATTGTGGTTTACAGTaataatttctcaaaaaaaaaaagaaaagaaaaacaaattcacATTATTTTCACTTACCACAAATGTGATCAGTTAACCAGtaaatgatttgtttgtgtaCTTAGTTTTTAGCACTGGAGCTAACAAGTTAATTCTGCTGACAGACAGTAGTTGCCAACATACCATCGATCAAACTGCCTAAGCTGAACAAATTCACATTGCTTATGTGGTTTCTGATACTGTATGAAACTTATCTATAAAAGTTGCCAAAGgcaagtgtgttattattgtgtaaataattagtaatttgtaattatttagacatttttagacATAATTTTGTGCCTTATTTGAGCTACATTAAGCTCGTAGCACCAGTGCAGAActgaagaagcaaacttcagacactgTACTGGCTGATCAACCATATTTGCAGTAggttaaaaatgtgtgaattccttttttctttttttttttcttttttttccttttttgggGTTGCTGTAAAAAATAgtctttatctatttttttttttatttcacagagGTTAAAGCTGAGCTTTACCAGAGATTTTACAGATCTGTgtcaatgtaaatgtatttgaaCAAATAAATCTCATAATGTAAATGTGA

Function

symbol description
mpv17l2 Predicted to be involved in mitochondrial ribosome assembly. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Is expressed in liver. Orthologous to human MPV17L2 (MPV17 mitochondrial inner membrane protein like 2).

NR:

description
mpv17-like protein 2

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K13348 MPV17; protein Mpv17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026928468.2 True 4897 mRNA 0.40 5 19300621 19309461

Neighbor

gene id symbol gene type direction distance location
LOC113533188 ifi30 coding upstream 3073 19289267 ~ 19297548 (+)
vtg3 LOC108270710 coding upstream 12978 19271952 ~ 19287643 (+)
ttll7 ttll7 coding upstream 330074 18912318 ~ 18970547 (+)
uox uric,LOC103030682,LOC108430123 coding upstream 423545 18865130 ~ 18877076 (+)
ctbs ctbs coding upstream 448252 18848553 ~ 18852369 (+)
LOC113524462 NA coding downstream 9826 19319287 ~ 19322971 (+)
LOC113535669 pde4c coding downstream 15272 19324733 ~ 19403219 (+)
rab3ab rab3a,rab3ab,LOC107680521,LOC107665838,LOC107597148,LOC107553558 coding downstream 96225 19405686 ~ 19416175 (+)
klhl26 klhl26,LOC107680559,LOC107747058,LOC107597147 coding downstream 120450 19429911 ~ 19439181 (+)
crtc1b crtc1,LOC107747695 coding downstream 132703 19442164 ~ 19458174 (+)
G184340 NA non-coding upstream 219136 19081252 ~ 19081485 (+)
G184309 NA non-coding upstream 288009 19012407 ~ 19012612 (+)
G184167 NA non-coding upstream 405746 18891239 ~ 18894875 (+)
G183796 NA non-coding upstream 695699 18598718 ~ 18604922 (+)
G183797 NA non-coding upstream 703381 18593698 ~ 18597240 (+)
G184504 NA non-coding downstream 150357 19459818 ~ 19461690 (+)
G184503 NA non-coding downstream 152363 19461824 ~ 19462843 (+)
G184614 NA non-coding downstream 239202 19548663 ~ 19602639 (+)
G184617 gamt,LOC107747770,LOC107685360,LOC107597217,LOC107757934 non-coding downstream 351631 19661092 ~ 19664491 (+)
G184718 NA non-coding downstream 394174 19703635 ~ 19704250 (+)
adgrl4 adgrl4,LOC102783218 other upstream 30360 19254931 ~ 19270261 (+)
LOC113526284 naaladl2 other upstream 891564 18166622 ~ 18409057 (+)
G183549 NA other upstream 1504002 17795445 ~ 17796619 (+)
ect2 ect2,LOC107674529,LOC107718889 other upstream 1518807 17754176 ~ 17781814 (+)
mcf2l2 LOC108270998,LOC108439422,LOC106613920 other upstream 1549119 17672171 ~ 17751502 (+)
smim7 smim7,LOC107568062,LOC107703137,LOC107658516 other downstream 176867 19486328 ~ 19487784 (+)
LOC113546543 NA other downstream 217416 19526877 ~ 19548212 (+)
si:ch73-40i7.5 apba3,si:ch73-40i7.5,LOC108271288,LOC107750992,LOC107592849,LOC107661085,LOC105938289,LOC107096970,LOC105910839,LOC106516779,LOC107550530,LOC102779936,LOC101467998 other downstream 222620 19532081 ~ 19554969 (+)
rps15 rps15,abhd8,LOC107685215,LOC107578086 other downstream 385766 19695227 ~ 19700274 (+)
tax1bp3 tax1bp3,LOC107685157,LOC107747253,LOC107680510 other downstream 518525 19827986 ~ 19834414 (+)

Expression


Co-expression Network