mafgb (mafg,mafgb)


Basic Information

Item Value
gene id mafgb
gene name mafg,mafgb
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 6961636 ~ 6979476 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026930342.2
TATGACGTCTGGCCTCCTCGGCACAAGAGAAAGCGGATCAACAAGGAGAAGGTGGGAGTGTTACAACAATTTCCGAAGCAGCGTCGGCAAAAAACTTCACCTCCGCCGCCTCAAACTTCTACTTTTGAACCCGTGCCAGTGCCGGAGACGCTCCCCGTTCACATTTGATCTGTGTGGTTTACAAGCGGCTCTCGTGGCATGACGACCACTAACAAGGGAAACAAAGCCTTGAAGGTGAAACGGGAGCCAGGCGAGAATGGCACGAGCCTCACAGACGACGAGCTGGTGTCGATGTCGGTGCGCGAGCTCAACCAGCACCTGCGCGGCCTCTCCAAGGAGGAGATTGTACAGCTGAAGCAGCGGCGGCGCACGCTTAAGAACCGTGGCTACGCCGCCAGCTGCCGAGTCAAGCGTGTCACTCAGAAAGAGGAGCTCGAGCGCCAGAAGGCTGAGCTCCAGCAGGAGGTGGAGAAGCTCGCTTCAGAGAACGCCAGCATGAAGGTGGAGCTCGATGCCCTGCGCTCCAAATATGAGGCACTGCAGAGCTTCGCCAGGACTGTGGCTCGTGCTCCTGCAGTGCCCATCACCAACACGCCCGTTCCCGCCCGCGGGTCTCTGGCCTCAGTCATTGGGCCGCTCGTACCGGGGAAGGTGGGCGCCACCAGCGTCATCACGATAGTCAAGTCCAAAACAGATGCTAGGTCTTAGTACAGGccagtgaggagagagaggaggaggaggggtgagcgagagagagagtgaaaagggGCTTGGTCAGTGCATCACGATTTAGGCACGGGACAGATTCAGTAAGAGGTCAAATGGGTGCAAATGGTTCCAGATTTCTGTGAGATGGAGCCTGACATGGAGGACTGGTGTCTAAAAAGACAGTGTCCTCAACACATCATGATACTTCCACTTGAATTGGTCAGTACAGTATCTTTCTGTACACACTTCCAAACCAAAACCATCATCAAGGACAATTAGGATGACTGGGCTTCCAGAAAAATCtccacattttaaagaaattacgAGAATTTGAAAAAGAAGCAGCAAAACTGTTTTGTCCCTTGTGACTGCAATGAGTGCTGGATTTATagtctttatatatttttttttgtatgatatTGTTGGACTTTAGGGCccaagtgtattatttttttttctgatttttatgcACTATTTGAAATTCattgtgttgctgtgttttgTACTTCCATCCTTTTCCTGTGTCAGAGAACTCAGTCACAAAGCAGACGTACACTTTGTACACTTTCAATCTCCACCTTGTGTTTATAAACACAAGGATGTGGAATAAAGACAaggcaattttttattttttacaagaaATCCTATAAAGCTGGCTTAGTTAAGAAAGAGAGCTTGTCCAGGACACACACATCTGACGTATTGTGGAATATTAGTGTTCTTCCTGTGTTTATACTTACCCTGCACTGGCGTATCTCCTATTCTGAGATGCTTCCAGTCCTGAACACGCTCTACTCTTCACGCTTTTGCGTCCCTTTACCGTTGCCTAATGTTGTGCACTGACCAGCCACTGCTGAAAaacgagacgagacgagacgagagGAATCAGCTGATGATATTCGTATGGTAGCTATCAGGATAACTGAGACCAGTTTATGTGATTGGGTAGTCCTTTTTTcataagaaaattaaaaaaagggtttatttcttttataacaGAAGCTTATTGGCAAGGCAATACGATCTTTATGTTGTGGAAATTTAAACTGCTGATTTAGTTTCCTTTGTGGAGCTCATGAAATTTTGTCATGTGTTTTTATGCTggcaaaacaatattttatttatatatctttgATTACAAAGTGTtaccctattattattattattgttgttgttattattattattattattattattatta
>XM_026930343.2
tgtgtcagtcagtgtgTTACGAAAGCGACAAGCGAAGAGCTTCGCTTATTTAAAGGCGCTCTAAGCCGTGCTGATTCATCACGATCATCATCACGGGGTCATACCGAGCCGCGCCGTGTTTGTCTCGGCTGGACATCCACCCAGAGCAGCCCTGTAACCGCTACACAAAGGGCACATTACTGGAATCTGTGTGGTTTACAAGCGGCTCTCGTGGCATGACGACCACTAACAAGGGAAACAAAGCCTTGAAGGTGAAACGGGAGCCAGGCGAGAATGGCACGAGCCTCACAGACGACGAGCTGGTGTCGATGTCGGTGCGCGAGCTCAACCAGCACCTGCGCGGCCTCTCCAAGGAGGAGATTGTACAGCTGAAGCAGCGGCGGCGCACGCTTAAGAACCGTGGCTACGCCGCCAGCTGCCGAGTCAAGCGTGTCACTCAGAAAGAGGAGCTCGAGCGCCAGAAGGCTGAGCTCCAGCAGGAGGTGGAGAAGCTCGCTTCAGAGAACGCCAGCATGAAGGTGGAGCTCGATGCCCTGCGCTCCAAATATGAGGCACTGCAGAGCTTCGCCAGGACTGTGGCTCGTGCTCCTGCAGTGCCCATCACCAACACGCCCGTTCCCGCCCGCGGGTCTCTGGCCTCAGTCATTGGGCCGCTCGTACCGGGGAAGGTGGGCGCCACCAGCGTCATCACGATAGTCAAGTCCAAAACAGATGCTAGGTCTTAGTACAGGccagtgaggagagagaggaggaggaggggtgagcgagagagagagtgaaaagggGCTTGGTCAGTGCATCACGATTTAGGCACGGGACAGATTCAGTAAGAGGTCAAATGGGTGCAAATGGTTCCAGATTTCTGTGAGATGGAGCCTGACATGGAGGACTGGTGTCTAAAAAGACAGTGTCCTCAACACATCATGATACTTCCACTTGAATTGGTCAGTACAGTATCTTTCTGTACACACTTCCAAACCAAAACCATCATCAAGGACAATTAGGATGACTGGGCTTCCAGAAAAATCtccacattttaaagaaattacgAGAATTTGAAAAAGAAGCAGCAAAACTGTTTTGTCCCTTGTGACTGCAATGAGTGCTGGATTTATagtctttatatatttttttttgtatgatatTGTTGGACTTTAGGGCccaagtgtattatttttttttctgatttttatgcACTATTTGAAATTCattgtgttgctgtgttttgTACTTCCATCCTTTTCCTGTGTCAGAGAACTCAGTCACAAAGCAGACGTACACTTTGTACACTTTCAATCTCCACCTTGTGTTTATAAACACAAGGATGTGGAATAAAGACAaggcaattttttattttttacaagaaATCCTATAAAGCTGGCTTAGTTAAGAAAGAGAGCTTGTCCAGGACACACACATCTGACGTATTGTGGAATATTAGTGTTCTTCCTGTGTTTATACTTACCCTGCACTGGCGTATCTCCTATTCTGAGATGCTTCCAGTCCTGAACACGCTCTACTCTTCACGCTTTTGCGTCCCTTTACCGTTGCCTAATGTTGTGCACTGACCAGCCACTGCTGAAAaacgagacgagacgagacgagagGAATCAGCTGATGATATTCGTATGGTAGCTATCAGGATAACTGAGACCAGTTTATGTGATTGGGTAGTCCTTTTTTcataagaaaattaaaaaaagggtttatttcttttataacaGAAGCTTATTGGCAAGGCAATACGATCTTTATGTTGTGGAAATTTAAACTGCTGATTTAGTTTCCTTTGTGGAGCTCATGAAATTTTGTCATGTGTTTTTATGCTggcaaaacaatattttatttatatatctttgATTACAAAGTGTtaccctattattattattattgttgttgttattattattattattattattattatta

Function

symbol description
mafgb Enables protein heterodimerization activity. Contributes to DNA binding activity and DNA-binding transcription factor activity. Acts upstream of or within positive regulation of transcription, DNA-templated. Part of transcription regulator complex. Orthologous to human MAFG (MAF bZIP transcription factor G).
mafg Enables identical protein binding activity and sequence-specific double-stranded DNA binding activity. Predicted to be involved in regulation of epidermal cell differentiation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within adult behavior; in utero embryonic development; and regulation of cell population proliferation. Predicted to be located in nucleoplasm. Predicted to be active in nucleus.

NR:

description
PREDICTED: transcription factor MafG-like isoform X1

GO:

id name namespace
GO:0045893 positive regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K09037 MAFF_G_K; transcription factor MAFF/G/K

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026930342.2 False 1912 mRNA 0.45 3 6961636 6979476
XM_026930343.2 True 1929 mRNA 0.45 3 6961636 6979107

Neighbor

gene id symbol gene type direction distance location
si:ch73-100l22.3 LOC108271015 coding downstream 6892 6940768 ~ 6954744 (-)
mfn1b mfn1b,LOC108270971,LOC108443893,LOC107701405,LOC107661155 coding downstream 48318 6900248 ~ 6913318 (-)
shroom2b LOC108271435,LOC105905657 coding downstream 75223 6861351 ~ 6886413 (-)
clcn4 clcn4,LOC108443897,LOC103025096,LOC107552404,LOC107705120,LOC107558374 coding downstream 116391 6831248 ~ 6845245 (-)
LOC113536768 LOC108270562 coding downstream 144923 6809823 ~ 6816713 (-)
pycr1b pycr1,pycr1b,LOC107572052,LOC107564555,LOC108443889,LOC108236293 coding upstream 8827 6988303 ~ 6995568 (-)
LOC113536680 LOC108270653 coding upstream 29822 7009298 ~ 7011515 (-)
aspscr1 aspscr1 coding upstream 39329 7018805 ~ 7055924 (-)
tmc6b tmc6 coding upstream 100024 7079500 ~ 7108209 (-)
tk1 tk1,LOC107713239,LOC107726782 coding upstream 171203 7150679 ~ 7154709 (-)
G177097 NA non-coding downstream 223028 6738321 ~ 6738608 (-)
LOC117598400 NA non-coding downstream 372340 6579004 ~ 6589296 (-)
G176991 eif4g2,LOC108433007,LOC101472382,LOC103379577,LOC100694876,LOC102291832,LOC102792130 non-coding downstream 410054 6551325 ~ 6551582 (-)
G176992 eif4g2,LOC108433007 non-coding downstream 410374 6550914 ~ 6551262 (-)
G176990 NA non-coding downstream 416566 6543999 ~ 6545070 (-)
G177374 notum non-coding upstream 79056 7058532 ~ 7059550 (-)
G177404 NA non-coding upstream 158153 7137629 ~ 7138904 (-)
LOC117598441 NA non-coding upstream 176752 7156228 ~ 7157621 (-)
G177448 NA non-coding upstream 288085 7267561 ~ 7271271 (-)
G177455 NA non-coding upstream 310409 7289885 ~ 7290092 (-)
LOC113536608 LOC108270551 other downstream 100288 6856755 ~ 6861348 (-)
LOC113536561 srsf7,LOC107665899,LOC107693014 other downstream 1253332 5696380 ~ 5708304 (-)
trip4 trip4 other downstream 1764818 5139610 ~ 5196818 (-)
G176307 NA other downstream 1880741 5079817 ~ 5080895 (-)
lto1 oraov1 other downstream 2457307 4498946 ~ 4504329 (-)
si:dkey-56d12.4 LOC108270721 other upstream 500946 7480422 ~ 7484117 (-)
si:ch1073-365p7.2 NA other upstream 600958 7580434 ~ 7588815 (-)
igf1rb LOC108271091 other upstream 696440 7675916 ~ 7764430 (-)
trnar-ucg_7 NA other upstream 1265173 8244649 ~ 8244721 (-)
trnar-acg_7 NA other upstream 1267227 8246703 ~ 8246775 (-)

Expression


Co-expression Network