minar1 (kiaa1024,si:cabz01029535.1,LOC107719677,LOC107742309,LOC107662343,LOC107692337)


Basic Information

Item Value
gene id minar1
gene name kiaa1024,si:cabz01029535.1,LOC107719677,LOC107742309,LOC107662343,LOC107692337
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 9226447 ~ 9257997 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026930378.2
TGGGAACGATATCACAGCTCTCATCCTCTACTTCATtccacatgcatgcatgcacagcCATGAAGGAAACAACAACCGAAATGCATCCAGATAATAagcaataatattttttttccatgcacagGACTGCAGATGGGATCGTGCAATAGGTTATCATCTTTTCTCTAAGATAAGAAACACATCAGCCACCATAATGGATGCAGTGCCAGAATACTCGATTTTCCTTGTCAGGATTTTGGAGGAACTAGACACTAAGTACAGCACTGTGTCATATCAGGATCTGTGTAAGTCTCTGTGTGCACGTTTTGACCTGGTTCATCTGGCAAAATTGAGGAGCTTGCTCTTCTACACGGCATGTTTGGATCCTAGTTTTCCCGCTACCTTATTTAAGGACAAGATGAGGTGTTCGGTGGAAGATCAGCAGTCTAAGAAACTCATGGTAGCTGCGGACATTGTGACCATGTTCAACCTCATCCAGATGAATGGTGGGATGGCCAAAGACAGGTTACCAGTTATTCAGAAACCCAAGTTTCATAAAAATCAATCCTTTGAGTCCTGCAGGTCTGATACAGATGTGTATAAATACAACgaatgtgaaagtgtgtatagTCACACCGACAGAAGGGGTCACCATGCTTCGCGGAACTCACCCTGCCCCAAATCTGAGTGCAACAGCTGTCAGCCATTTATACCAGCTTCAGAGCCCAATTTTCTCCTGGGAGTCAGTAAGGATCTGAAATGTAGAGCAGCATCACTGGATAAGCTGCAGCATCTGCCTCAGTATGCCAGTGCCAGTCCTCCTCCGTGTGAGATGCAGAGCACCTACTTCCCCATGGACATCGATAGCGAGTCCACTACCGACCACGACTCCCTGCACATCAACCCGGGTGGCAAGGACGTTTTTCTGCCTAACTCCGAGTCTTTCACCGTGCACTCGTGTGTGCAAAAGCGGAATATTTTCAAGGAGGACTTTCACAACCTTGTTGCCTTTTCGCCCCATGTGATCTCTACGGAGTCTAAAACCAGTGCCAGAGACAGTGGAGATTACCACAGGAGGGAATTGCACAAGCCTCCAACATTCTTTAATCACAGCTTTGAGTTGCCATATAGCAACCCTTATTTTGAACCGGTCAACTCACCTATACAAAGCAAAGGACGAGTGAAGCACGAGAGTCTAGACGACTTGCAGGCATCCACATATTTTGGTCCAACGACGGTTACTGAGTGTGTGAACACCAGGAGGACTTCTGGGAAGCAGAGCAGGCAGTCTGCCTGGCCTGTCAAGAGCTTAAGCCTGAACGCAGACGAGGGCTCTGAATTTGAGAGATCCTTTTTAAACCATAAGGTGCCAGTAGACAATCACCGCCATATCAACATGATGGACAACGACCAGCACTTCCAGTGTGCCAAAGAGAAGCCCACAGCCTCTCCGTCAGGCTTCCCCAAGAAGTCCAGTGGACCAAAAATAAAGGAGATGGCCTCCGTTGGTTGTGGTCCGAGTtctgaaaagagagaaggaggaaagaaaTATAAAGACAAGAGCATCAACTGTCCATCGCTCCAGAGTGCTAACTTAGACAATGGTTTTAGTGTAGGGACTCAGACTGACCAGTCAGAACAGAGGAAGTTGAAAGACTACAGTATGCACAAGTATGCGGAGAGGCCACCTTTTAAACATGCAGACGAGGAGTGTGAGATCGTAAGTGATGACATTAGTGACATATTTCGCTTTCTGGATGACATGAGCATATGCGACTCTATTGGGCTACCCCAGTCATCCTGTTACAACAGCAATGGCTCGCTCTCTCAGGTGACAAAGTCAGATGGTGATAGCTCACCTGAACGCAACACGATCAAACTAGGCAAGTCTGCCAGCAAGCTAGACCATTTATTCCACTCTCTGGAGAACACTGATGACGAGCTCAAAGCGAGCGTATGCAAGCTGGTCCTCAGGATTGGTGAAATCGAGAAGAAGCTTGAATCCCTCTCAGGAGTGCGTGGGGAGATTTCACAGGTCCTGTCCAAGCTCACCAAGCTGGATGAGAAGATCCAAGAGCCAGAAGCAAACGGAAAATCTAGTGACGGTGGCATGGCCCAGATTCAGACGGATGTGAACCTTTCACCGCACATGTTCCAGTGCCACACCACAGGTCACACTGTCAAAGtggacacaaacacagactggTGCTGCTCAGATGCTAGTGGAAGTGAAAGCCTGAGGGTGAAGGCGCTAAAGAAGAGCATGTTCACTCGCAGATCTTCCAGGTCACTGACAGAGGAGAACAGTGCTACCGAGTCTAAAGTGGCCAGCATCACCAATTCTCCTCGAGACTGGAGAACTGTCTCTTATTCAAGCCATCCGGGAGAAGAtgtgaaagagaaggacaggcaTGGTGAAGGCAAGGACAGACATAGGAAAGCCAAAGAGACAGATCGGCAATATGACCCTCACCAGGCACACCGGTCATCCAAGGTCCCGAAGGACTCATACCTGGTGGAGCAAGTTTTCAGCCCCCACCATTACCCCCCCTCTGTCAAGTCACACATGAAGGGAAGTCCTCTGTACACAGACCTGCGATTGACTGGTCTGACTGACAGCAAACGTCCACAGCCTTCTTGGACCATAGAGGAATTCAAACGCAACTCAGGAGACAAGAACAAACTCAGTGTGCTGGACCTACAGACCCAGGAGTCACTCAACCCCAATAATCTGGAATACTGGATGGAGGACATCTACACGCCTGGCTATGATTCACTGCTCAAGCGCAAAGAGGCAGAGTTTAGGAGGGCCAAAGTTTGCAAGATTGGTGCTCTGATCGCTGCAGCAGCCTGCACTGTGATATTGGTCATTGTTGTGCCCATTTGCACTATGAAGTCTTGAGGTCTTCTTCCATGTTGCCAATAAACACAAGACGACTTGTTTGGCTGATGTAGGGTTAATTTTGGTGCCTAGATTAAGTCTTATTGTGAATTTGATAGAACTTTTAATGGCAGACGTCCATTCAGAGAACTCGTATGCTCAGTTTTTGGCTTAATCCAGGCTCAAGGAACTGCTTTTAGAGTCTAACTACAAATACAATTCCTTAATGAGGATTAACATTTGAAGTTTGTCCTTTTTATTTCTAGTAGAAAAATGATTTGTTAACATAGACTTTTATGGAACATAGataatgttttcttgttttatagctAGTATTTAACATACTATATTAAGAAATTTTAATTCTGAGATCTTTATGTTGTTGCAATAGACACTACATGGAAGGAAGCgtagtatattttttattttactatgaTTCTATGAGAATTATTTTTCAATGAATTTGCAGACAGAATGTGACGCTGTACAGCAAGGTTTATCTTTTTTGACAAATCAGGAATGTTTTATTGGGTttgtgcaatgttttttttttcctaagtgAAAATTTAGATATGATAGATGACTAGATTACTATATATTCAAGAAAACCATTTCAGAAGAAGTGAATGTATGAAGGGCCATTGTATGTATTAATTGTATGAGGATTCTAAAATGATTCCTCTCCTGATGTTTACTTGTTATTTACTTAATACTCAGTACAGTTAATTCAAATTTAGTTCAGCGAAACAATGCTCTGTCTTTTGATTAGCATTCTTTGCCTTGCTATTTCATGATCATGATTTACTTGAAGCTCCTTACATTCTTAGCAGCTCAATTGTTTTACTTTTGAATTTGGACTATATACGAAATGTCAGTTTCATCTGTATCCATGGCTTTGTCCCAAATGGTACGATTCACATCTAATTAGTGTTTTTATGCTGCCTTCCCATGCTCATCGGATGTCCTCTTTCCTACTTGCAAGGTCATAATTATGTTTTTGCATTCCAGTGCATTATTGGTATTTTGGCATCATCCTAACATTTAGCCCTATTCTTCGAACCTCTCCTCTGAGTCAAGGGTAAATGTCAGTATCCAAATTAATCTCATGATAATTCCAATAGCACATGAGGGCAGCATTGATAAAACATTGTAGGAAATGCCCTAAGTGCTACAATGAATAGaacccattttaaaaaaagttgttttgaaAGTCATTCCTTTCAGTTTTTCATATGCTGTACTCTTCATGGTAACAGGATTCACACAACACATTGTGTACATCAGTGTTCTGTTACTGAGAAATGGCAGTGAGCACCAAGTTGGTTAACCTTAAATTGATTATGGAATTAAATCAAGGATAAAgttacatatacattacatcTGTGGGACATATCTGTGCCATCTTAAAGGCTTATCTCAACCACTAATTAGCAGAAAAGAAAGCAGGCTACCTGTTTAACTAGCTGCTTAGATAGGCTAGAATAGCACAAAGTGTTGACCTCTTTTCTTGCAACCCATATTACAATCCATACTTTTGACCCGTTAGAATGaaattacaataataactctTTTTGAAAACTAGTGTTTGGGATGTGCCCTATGTCTGTCTTTGCTGGGATATAGCAGAATCCATTCACTACTCTTCATAGACCATTAGGCCTTAAGACCATTGAATGCAAACTGCCAGCCATGTATTACTTTTAAATTCACCAACAAATCAAGCTTGGCCAATTTAGTTTGAAATCAACAAATGTATGATTTTCATCAAATTGCCATCAAAAAACATACAACTGCTGCTGAGATGAAAAATACTGAGGGAGTTGTTTTTCTGTGCTCATTCATGTCTGCTTTGTACCATATCAGTAGGGTTGACATTGAGATAGAGAGAcatgtttcataaaaaaaaaaaaaaagctctgcagTGAGAAATGGTCCTTGTAGAGTACATTTAGAGTACATTTCTCTCAGTAATGTAAATGGACTTATGGGAATTTAACCCTACTTCTTGTGAAATCAATGGCACATGGCCAACCTTTtatggttttctttctttgattgTAGCTTGAATGTGTCATAGCCAGACACTTTGATTAAAGGTCTGGTGCAGCGAAAAGTTAATTTACACAGTTTTCCCCTCATCTCAAATGTAGTCGATCGGAATAGACATTGGATCATTTTGGCCTGACAAATTTTCTATAAATACGTGCCAAATCTTCATATACCTGCATCAAATGACAGCACTGTAGTGAGTAataccattttaaataaaccattttgttaaattgtaGGTATAGtccatatttataaattatactgTAATCCATGTAACATGCAGCTTTTATGTACAATACCTTctttaaggaaataaataactatTCAGGATGACTGTTCCATAACATTGCAGCATTCAAATACTTGGTAACGGTGCAAGTACTTACAAAGGAAAAGTgtttatggaaaatattttggGTGAGATTAatttccattacttgttagctatgCTATTCTCATAGCTGTAAGTCAAATCTGAAGAAGACATTGCCAGACACTAAACATGTTGGCAGATCGACTACATCTGAAATAAGttgaaaatgatcaaattgATTTTTCGcaaaactattcctttaataacCGGCTGCTTGAACGTGACTTTTTAGTTGATGGATGATACTCTGTCGGGTGACTCTGCCTTCACCACAGGAACTGTGAGCCCTCGTACACTGTAAGACCCTGTACATAAACTTCAGGTTCAAAGTGTATAATGTAAAACAGGTGTAACTGGAATAATATTCTAATAAAACTCTTATTGTTCTGACTGTTGAA

Function

NR:

description
PREDICTED: UPF0258 protein KIAA1024 homolog

GO: NA

KEGG:

id description
K24829 MINAR1; major intrinsically disordered Notch2-binding receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026930378.2 True 5683 mRNA 0.41 4 9226447 9257997

Neighbor

gene id symbol gene type direction distance location
adamts17 adamts17,LOC107662259,LOC107692780,LOC107563246,LOC107742308,LOC107553817,LOC107719674 coding upstream 36528 9039210 ~ 9189919 (+)
cers3a cers3,LOC107692405 coding upstream 190993 9007369 ~ 9035454 (+)
lins1 lins1 coding upstream 224596 8995376 ~ 9001851 (+)
chsy1 chsy1,LOC107662251,LOC107755644,LOC107742304 coding upstream 443605 8727720 ~ 8782842 (+)
selenos selenos coding upstream 502365 8718527 ~ 8724082 (+)
zfand6 zfand6 coding downstream 78650 9336647 ~ 9349909 (+)
fah fah,LOC107662319,LOC107691923,LOC107742310 coding downstream 92199 9350196 ~ 9378551 (+)
arnt2 arnt2 coding downstream 160528 9418525 ~ 9529240 (+)
abhd17c abhd17c,LOC107662262,LOC102793890 coding downstream 288749 9546746 ~ 9590337 (+)
cemip cemip,LOC107591290,LOC107691638,LOC107662322,LOC107553744 coding downstream 367192 9625189 ~ 9754446 (+)
G178539 NA non-coding upstream 20769 9205457 ~ 9205678 (+)
G178383 NA non-coding upstream 242205 8982965 ~ 8984242 (+)
G178260 NA non-coding upstream 417503 8807605 ~ 8808944 (+)
G178192 NA non-coding upstream 636892 8588820 ~ 8589555 (+)
G178170 NA non-coding upstream 681972 8544269 ~ 8544475 (+)
G178740 NA non-coding downstream 19608 9277605 ~ 9277816 (+)
G178741 NA non-coding downstream 19890 9277887 ~ 9278116 (+)
G178761 NA non-coding downstream 41389 9299386 ~ 9299657 (+)
G178760 NA non-coding downstream 42997 9300994 ~ 9301338 (+)
G178764 NA non-coding downstream 51320 9309317 ~ 9310183 (+)
LOC113536578 NA other upstream 955697 8253421 ~ 8270750 (+)
trnar-ucg_8 NA other upstream 978359 8248016 ~ 8248088 (+)
trnar-acg_6 NA other upstream 981423 8244952 ~ 8245024 (+)
trnar-ucg_6 NA other upstream 982799 8243355 ~ 8243648 (+)
rpl37a rpl37a,RPL37A,rl37a,zgc:171772,LOC107564751,LOC107567628 other upstream 1955127 7267831 ~ 7271320 (+)
LOC113536516 ephb3,LOC107687281,LOC107668659,LOC102790569,LOC107744192 other downstream 1552673 10810670 ~ 10850923 (+)
G179632 NA other downstream 1838156 11096153 ~ 11098811 (+)
G179643 NA other downstream 1902349 11160346 ~ 11161597 (+)
G179758 psmd1 other downstream 2170616 11428613 ~ 11430897 (+)
G180121 NA other downstream 2796961 12054958 ~ 12055749 (+)

Expression


Co-expression Network