nadsyn1 (nadsyn1,LOC107727102,LOC107730094,LOC107686870,LOC107679728)


Basic Information

Item Value
gene id nadsyn1
gene name nadsyn1,LOC107727102,LOC107730094,LOC107686870,LOC107679728
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 4281244 ~ 4299367 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026930420.2
GGCGGGGTTTACAGACCGGAAGTGACATCGCAGGAACAGCAGGAAGGCTCGCGCGCTGATCTGCTTGGGCGGTCAGTAGAAGTTGCTGGTTATTTTGGCACCATGGGGCGGAAAGTTACATTAGCGACTTGCTCCCTGAATCAATGGGCTTTAGATTTTGATGGCAATTTACAAAGAATACTGAAAAGTATTGAGATAGCCAAATCTAAAGGAGCCAAGTACAGACTGGGACCAGAACTGGAAATCTGTGGCTACGGATGCGCTGATCACTTCTATGAATCCGACACACTTCTGCACAGCTTCCAAGTCCTCAAGGCGTTGCTGGAGTCCCCTGAGACGCAGGATATCGTCTGCGATGTTGGCATgcCTGTTATGCATCACAACGTTCGCTATAACTGCAGAGTCCTGTTCCTGAACAAGAAGATTTTATTGATCCGGCCTAAGATGCTTTTGGCAAATCATGGCAACAACAGGGAATTTCGCTGGTTTTCTCCATGGAGTAAGCCCAGATATGTTGAGGAGTACTTTTTGCCAAGAATGATCCAGGATGTGACAGGACAGGTGACGGTTCCATTTGGTGATGCAGTCCTGTCCACTAAGGACACGTGTATAGGCAGTGAGATCTGTGCTGAACTGTGGAACCCCAGGAGTCCCCATGTGGACATGGGTTTGGACGGCATTGAGATCTTTACAAACTCGTCTGCCAGCTATCATGAGCTACGCAAGGCTGACCAGAGGGTGAACTTGGTCAAGTCAGCTACCACAAAGAGTGGAGGGATCTATCTGTTCGCTAATCAGAAAGGCTGTGATGGAGATCGTCTGTACTACGATGGCTGCGCTATGATTGCCATCAACGGAGACATTGTCGCTCAGGGGACACAGTTCTCCCTTGATGAAGTGGAAGTTCTCACAGCCACTCTTGACCTTGAGGACGTTCGCAGctacagaggagagagatgtCACCCGCACATGGAGTACGAACACAAACCATACGAAAGGATCAAGGTCGATTTTTCATTGTCTGACTGCAAAGACAACTTCTTTCCCACTCACCAGGCTGTCGATTGGATCTTTCACACGCCTGAGGAGGAGATTAGTCTTGGTCCTGCATGCTGGCTATGGGACTATTTAAGGAGGAGCGGTCAGGCCGGCTTCCTGCTTCCTCTCAGTGGTGGAGTTGATAGCGCCTCTTCATCCTGCATCGTCTACTCCATGTGTGTGCTCATCTGTCAGGCAGTCAAAGATGGCAATGATCAGGTGTTGCAGGATGTTCAGCGCGTGGTGAGCGATGCCTCTTACAGGCCTAAAGATCCGCGGGAGTTGTGTGGACGCCTCTTCACCACCTGCTACATGGGCAGTGAAAATTCCTCAGAAGACACCCGCAACCGAGCGAAAGAGCTGGCTGCTCAAATCGGCAGCAATCATCTCAACATCAACATTGACATGGCGGTGAAAGGCATGCTGGGAATCTTCTCCATGGTGATGGGCAAGTGGCCTAATTTTCGTGCAAATGGAGGGAGCAGTAGAGAGAACCTGGCTCTGCAGAATGTACAGGCTCGTGTCAGGATGATTTTGGCCTACCTCTTTGCCCAGCTGTATCTGTGGGCTAAAGGGAAACCTGGAGGTCTGCTGGTGCTTGGCTCAGCCAATGTGGATGAGAGTTTGACTGGCTACTTCACTAAATATGACTGCTCCAGTGCCGATATAAACCCCATTGGAGGTGTTAGTAAGATGGACCTGAAGAGCTTCCTGCGTTACTGTGCCGAGCACTTTAAGCTTTCCGCTCTTAAGAGCATCATAGCTGCCCCTCCCACTGCAGAGCTCGAACCCTTGACCGACGGCCACGTGTCTCAGACTGATGAGGTATGGATGAGTCActctgagagagacagggagagaggatACACGCAATTACAGTAGCCTGGGAGAAATCGAgcCGATATGGGGATGACCTATTCGGAGCTGTCGGTGATCGGCAAGCTTAGGAAGATCTCCAAGTGTGGCCCGTACAGCATGTTCTGCAAGCTCATTCACTCATGGAGAGAAAGCTATTCCCCTT
>XM_034308572.1
CGGGGTTTACAGACCGGAAGTGACATCGCAGGAACAGCAGGAAGGCTCGCGCGCTGATCTGCTTGGGCGGTCAGTAGAAGTTGCTGGTTATTTTGGCACCATGGGGCGGAAAGTTACATTAGCGACTTGCTCCCTGAATCAATGGGCTTTAGATTTTGATGGCAATTTACAAAGAATACTGAAAAGTATTGAGATAGCCAAATCTAAAGGAGCCAAGTACAGACTGGGACCAGAACTGGAAATCTGTGGCTACGGATGCGCTGATCACTTCTATGAATCCGACACACTTCTGCACAGCTTCCAAGTCCTCAAGGCGTTGCTGGAGTCCCCTGAGACGCAGGATATCGTCTGCGATGTTGGCATgcCTGTTATGCATCACAACGTTCGCTATAACTGCAGAGTCCTGTTCCTGAACAAGAAGATTTTATTGATCCGGCCTAAGATGCTTTTGGCAAATCATGGCAACAACAGGGAATTTCGCTGGTTTTCTCCATGGAGTAAGCCCAGATATGTTGAGGAGTACTTTTTGCCAAGAATGATCCAGGATGTGACAGGACAGGTGACGGTTCCATTTGGTGATGCAGTCCTGTCCACTAAGGACACGTGTATAGGCAGTGAGATCTGTGCTGAACTGTGGAACCCCAGGAGTCCCCATGTGGACATGGGTTTGGACGGCATTGAGATCTTTACAAACTCGTCTGCCAGCTATCATGAGCTACGCAAGGCTGACCAGAGGGTGAACTTGGTCAAGTCAGCTACCACAAAGAGTGGAGGGATCTATCTGTTCGCTAATCAGAAAGGCTGTGATGGAGATCGTCTGTACTACGATGGCTGCGCTATGATTGCCATCAACGGAGACATTGTCGCTCAGGGGACACAGTTCTCCCTTGATGAAGTGGAAGTTCTCACAGCCACTCTTGACCTTGAGGACGTTCGCAGctacagaggagagagatgtCACCCGCACATGGAGTACGAACACAAACCATACGAAAGGATCAAGGTCGATTTTTCATTGTCTGACTGCAAAGACAACTTCTTTCCCACTCACCAGGCTGTCGATTGGATCTTTCACACGCCTGAGGAGGAGATTAGTCTTGGTCCTGCATGCTGGCTATGGGACTATTTAAGGAGGAGCGGTCAGGCCGGCTTCCTGCTTCCTCTCAGTGGTGGAGTTGATAGCGCCTCTTCATCCTGCATCGTCTACTCCATGTGTGTGCTCATCTGTCAGGCAGTCAAAGATGGCAATGATCAGGTGTTGCAGGATGTTCAGCGCGTGGTGAGCGATGCCTCTTACAGGCCTAAAGATCCGCGGGAGTTGTGTGGACGCCTCTTCACCACCTGCTACATGGGCAGTGAAAATTCCTCAGAAGACACCCGCAACCGAGCGAAAGAGCTGGCTGCTCAAATCGGCAGCAATCATCTCAACATCAACATTGACATGGCGGTGAAAGGCATGCTGGGAATCTTCTCCATGGTGATGGGCAAGTGGCCTAATTTTCGTGCAAATGGAGGGAGCAGTAGAGAGAACCTGGCTCTGCAGAATGTACAGGCTCGTGTCAGGATGATTTTGGCCTACCTCTTTGCCCAGCTGTATCTGTGGGCTAAAGGGAAACCTGGAGGTCTGCTGGTGCTTGGCTCAGCCAATGTGGATGAGAGTTTGACTGGCTACTTCACTAAATATGACTGCTCCAGTGCCGATATAAACCCCATTGGAGGTGTTAGTAAGATGGACCTGAAGAGCTTCCTGCGTTACTGTGCCGAGCACTTTAAGCTTTCCGCTCTTAAGAGCATCATAGCTGCCCCTCCCACTGCAGAGCTCGAACCCTTGACCGACGGCCACGTGTCTCAGACTGATGAGgcCGATATGGGGATGACCTATTCGGAGCTGTCGGTGATCGGCAAGCTTAGGAAGATCTCCAAGTGTGGCCCGTACAGCATGTTCTGCAAGCTCATTCACTCATGGAGAGAAAGCTATTCCCCTTCCCAGGTGGCTGCAAAAGTGAAGCATTTCTTCAGGATGTACTCGGTCAACAGGCACAAGATGACTACAGTGACTCCGTCGTACCATGCTGAGAGCTACGGCCCGGACGACAACCGCTTTGACCTCCGTCCCTTCCTCTACAACACACGGTGGTCTTGGCAGTTCCGCTGCATTGACCATGAGATTTCCTTAATGGAAGCTGGATATGCAGAATTCATATAAGGTCCTTATCTAATAATCTTCACGATTATTGTTTTAAGATTCTGATCATGTTTCTATTGCTATGTGAAATAATATCCTTTTAAATGCACCATGTAGTATGTTCATTAGTGCTCCTTAATGTTGGAGTTTACTCATATATATTACTGTACCTAGTAATTACCTCAAATTATTGGATATGttttaacaaaaagaaaataaaggggaaaaaatgctttGTAACTATTCATTTAAGTTTTCcctcacaggaaagtcttcagtctagaggatgctggtgagggaacaactgtttataggtgCTCTAATGTAAGACATAACAAGAACCTTGCTTCACAGACACTCCATTAAAATGTAACGATGAAATGTATCACGT
>XR_004579071.1
GGCGGGGTTTACAGACCGGAAGTGACATCGCAGGAACAGCAGGAAGGCTCGCGCGCTGATCTGCTTGGGCGGTCAGTAGAAGTTGCTGGTTATTTTGGCACCATGGGGCGGAAAGTTACATTAGCGACTTGCTCCCTGAATCAATGGGCTTTAGATTTTGATGGCAATTTACAAAGAATACTGAAAAGTATTGAGATAGCCAAATCTAAAGGAGCCAAGTACAGACTGGGACCAGAACTGGAAATCTGTGGCTACGGATGCGCTGATCACTTCTATGAATCCGACACACTTCTGCACAGCTTCCAAGTCCTCAAGGCGTTGCTGGAGTCCCCTGAGACGCAGGATATCGTCTGCGATGTTGGCATgcCTGTTATGCATCACAACGTTCGCTATAACTGCAGAGTCCTGTTCCTGAACAAGAAGATTTTATTGATCCGGCCTAAGATGCTTTTGGCAAATCATGGCAACAACAGGGAATTTCGCTGGTTTTCTCCATGGAGTAAGCCCAGATATGTTGAGGAGTACTTTTTGCCAAGAATGATCCAGGATGTGACAGGACAGGTGACGGTTCCATTTGGTGATGCAGTCCTGTCCACTAAGGACACGTGTATAGGCAGTGAGATCTGTGCTGAACTGTGGAACCCCAGGAGTCCCCATGTGGACATGGGTTTGGACGGCATTGAGATCTTTACAAACTCGTCTGCCAGCTATCATGAGCTACGCAAGGCTGACCAGAGGGTGAACTTGGTCAAGTCAGCTACCACAAAGAGTGGAGGGATCTATCTGTTCGCTAATCAGAAAGGCTGTGATGGAGATCGTCTGTACTACGATGGCTGCGCTATGATTGCCATCAACGGAGACATTGTCGCTCAGGGGACACAGTTCTCCCTTGATGAAGTGGAAGTTCTCACAGCCACTCTTGACCTTGAGGACGTTCGCAGctacagaggagagagatgtCACCCGCACATGGAGTACGAACACAAACCATACGAAAGGATCAAGGTCGATTTTTCATTGTCTGACTGCAAAGACAACTTCTTTCCCACTCACCAGGCTGTCGATTGGATCTTTCACACGCCTGAGGAGGAGATTAGTCTTGGTCCTGCATGCTGGCTATGGGACTATTTAAGGAGGAGCGGTCAGGCCGGCTTCCTGCTTCCTCTCAGTGGTGGAGTTGATAGCGCCTCTTCATCCTGCATCGTCTACTCCATGTGTGTGCTCATCTGTCAGGCAGTCAAAGATGGCAATGATCAGGTGTTGCAGGATGTTCAGCGCGTGGTGAGCGATGCCTCTTACAGGCCTAAAGATCCGCGGGAGTTGTGTGGACGCCTCTTCACCACCTGCTACATGGGCAGTGAAAATTCCTCAGAAGACACCCGCAACCGAGCGAAAGAGCTGGCTGCTCAAATCGGCAGCAATCATCTCAACATCAACATTGACATGGCGGTGAAAGGCATGCTGGGAATCTTCTCCATGGTGATGGGCAAGTGGCCTAATTTTCGTGCAAATGGAGGGAGCAGTAGAGAGAACCTGGCTCTGCAGAATGTACAGGCTCGTGTCAGGATGATTTTGGCCTACCTCTTTGCCCAGCTGTATCTGTGGGCTAAAGGGAAACCTGGAGGTCTGCTGGTGCTTGGCTCAGCCAATGTGGATGAGAGTTTGACTGGCTACTTCACTAAATATGACTGCTCCAGTGCCGATATAAACCCCATTGGAGGTGTTAGTAAGATGGACCTGAAGAGCTTCCTGCGTTACTGTGCCGAGCACTTTAAGCTTTCCGCTCTTAAGAGCATCATAGCTGCCCCTCCCACTGCAGAGCTCGAACCCTTGACCGACGGCCACGTGTCTCAGACTGATGAGGTATGGATGAGTCActctgagagagacagggagagaggatACACGCAATTACAGTAGCCTGGGAGAAATCGATAATAATTTAGGAGTCTTCTGATGGTCCTCCAGTATGTCTgcCGATATGGGGATGACCTATTCGGAGCTGTCGGTGATCGGCAAGCTTAGGAAGATCTCCAAGTGTGGCCCGTACAGCATGTTCTGCAAGCTCATTCACTCATGGAGAGAAAGCTATTCCCCTT

Function

symbol description
nadsyn1 Predicted to enable NAD+ synthase (glutamine-hydrolyzing) activity and glutaminase activity. Predicted to be involved in NAD biosynthetic process. Predicted to act upstream of or within nitrogen compound metabolic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in high grade glioma. Orthologous to human NADSYN1 (NAD synthetase 1).

NR:

description
glutamine-dependent NAD(+) synthetase

GO:

id name namespace
GO:0009435 NAD biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0003952 NAD+ synthase (glutamine-hydrolyzing) activity molecular_function
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds molecular_function

KEGG:

id description
K01950 E6.3.5.1, NADSYN1, QNS1, nadE; NAD+ synthase (glutamine-hydrolysing)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026930420.2 False 2059 mRNA 0.51 19 4281244 4297247
XM_034308572.1 True 2576 mRNA 0.48 21 4281246 4299367
XR_004579071.1 False 2099 misc_RNA 0.50 20 4281244 4297247

Neighbor

gene id symbol gene type direction distance location
mmp15b mmp15,LOC108271068,LOC107584709,LOC107686817,LOC107679737,LOC107562795 coding upstream 52280 4206958 ~ 4228964 (+)
LOC113536728 NA coding upstream 135573 4142637 ~ 4145671 (+)
sinhcafl LOC108271422,LOC107562797,LOC108413309,LOC107727116,LOC107686816,LOC101074870,LOC103370878 coding upstream 143856 4131602 ~ 4137388 (+)
dennd5a dennd5a,LOC107694459,LOC107727099,LOC107730084 coding upstream 152690 4079858 ~ 4128554 (+)
tmem41b tmem41b,LOC107730092,LOC107727087,LOC107686813,LOC107694458,LOC106562360 coding upstream 203516 4066579 ~ 4077728 (+)
tpcn2 tpcn2,LOC107584739 coding downstream 2904 4302271 ~ 4322689 (+)
ccnd1 ccnd1,LOC107686820,LOC107584710,LOC107730086,LOC107727103,LOC107679730 coding downstream 187185 4486552 ~ 4491375 (+)
fadd NA coding downstream 348030 4647397 ~ 4651092 (+)
csnk1g1 csnk1g1,LOC108271196,LOC107559435,LOC107738908,LOC107594477,LOC107686826 coding downstream 393166 4692533 ~ 4725750 (+)
rps17 rps17,LOC108271026,LOC100699764 coding downstream 431132 4730499 ~ 4736404 (+)
G175744 NA non-coding upstream 112843 4168187 ~ 4168401 (+)
G175703 LOC108271004 non-coding upstream 270011 4010238 ~ 4011233 (+)
G175527 NA non-coding upstream 666847 3614191 ~ 3614397 (+)
G175517 tmed3,p24b,LOC108271219,LOC107580748,LOC107750507,LOC108441851,LOC105913311 non-coding upstream 672400 3605162 ~ 3608844 (+)
G175493 NA non-coding upstream 699305 3579978 ~ 3581939 (+)
G175827 NA non-coding downstream 738 4300105 ~ 4300563 (+)
G175843 NA non-coding downstream 69240 4368607 ~ 4368810 (+)
G175894 NA non-coding downstream 86418 4385785 ~ 4385994 (+)
G175905 NA non-coding downstream 210049 4509416 ~ 4509701 (+)
G175939 NA non-coding downstream 275084 4574451 ~ 4574921 (+)
btbd10b btbd10,btbd10b,LOC107709927,LOC107727107 other upstream 622954 3647355 ~ 3658290 (+)
pth1b NA other upstream 634129 3645743 ~ 3647115 (+)
G174546 NA other upstream 2202617 2078077 ~ 2078627 (+)
G174536 NA other upstream 2220961 2058970 ~ 2060283 (+)
G173898 NA other upstream 2916313 1361782 ~ 1364931 (+)
ano1a ano1 other downstream 314039 4613406 ~ 4645198 (+)
G175977 pacsin3 other downstream 357238 4656605 ~ 4661136 (+)
LOC113536390 LOC108271079 other downstream 2823018 7122385 ~ 7132468 (+)
rpl37a rpl37a,RPL37A,rl37a,zgc:171772,LOC107564751,LOC107567628 other downstream 2968464 7267831 ~ 7271320 (+)
trnar-ucg_6 NA other downstream 3943988 8243355 ~ 8243648 (+)

Expression


Co-expression Network