plekho2 (plekho2)


Basic Information

Item Value
gene id plekho2
gene name plekho2
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 8596180 ~ 8612306 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026930526.2
ATCGGTTCGTGCAAGCTAGCTAGGTTACATCTAAAACCGCATACTAGCATACTATATAGTATGTCAAAACAGTGCGCAGTCCTGCGTGGCGTAGTATTTGATGTACTGTTTAGTGGGGCAGTATGCGGTTTCAGACATAGTCTCATCTGTGGTAGAACTAGAAGCTTTCGTGGGACTTAAACCGGaaaccaaacttttttttccacctcaaaCTTGTTTCGTTGCTGAGttgaaaagaggaaaagggCGATGAGCAGAAGAAGCACGGCGGCGTTACGACGCGCAGTTCCCTCTTTCTCAGCTTCGCATCATGTCGGCTGTGAGAAAGTTGTCAGAAGAAAGAAGTAAATTACCCACATCTGGCCTGAGATAAAGTGTCCGTcgagtgtttttttcttcctctccttcacATAACGGACTCTTAGTGCTTTATCATGGGAGATGATGTTAAAGATGAGCCAGCCAAGCCCAAAGAAACAACATTCAAAGGCAAAGCGGGCTGGTTGAAGAAGTCCTCAGGGAAGTTCCTGGGCAGCTACAAGGACCGCTACATCCAGCTGGACAAAACTGAGATTGCAGTGTATGAAAACGAGGACTTACAGAACTGCGTGGAGCGTCTGGACTTGGAAAACTATGACAAATGCCATGAGTTACGCAGCCCTTTCAAGAAGAAATACAGGCTGATACTGATACGAACGCCCAAGAGTGCGAGTAAGGTCAGTGATGTCAAACTGCAGGCTCAAAATCAGGAAGAGAAAGAAGCTTGGATTAAGGCACTCAGTGATGGCATTAACAGGGCAAAGAATAAAATCTTTGATGAGGTAAAAGTAGATGAAAGTTTATCTTTAGATCATGTAACACGTTCTCGACCGAAAGGAAACCGTGGTAGAAGACCACCAACCAGGATACACATGAAGGAGgctgcaAGCATTTCATCAGATGGAGTCTTGAGACTGGACCTTGACACTGTTGACAATATGCCTAACGGTGCCCACTTCTTATTGGATGGTGCTGATGGAGAAGCCAAAGTGGCTCCAGCTAAATCTCTTGATGATATTGCGGAAGAACCTGCAGGTGAAGATACGGCACCTCAGAAGAAAGTATTGAAGCCACCAATGCCTCCATCAAAGGAGAACAAACCCAGTGAAAGCCAGGACAGTGAGAGCAAACATGAAGAATCTGCCCCACAGAAGAAGATTCTTATGCCACCAATGCCACCATCAAAGGAGCAGAAGCCATCTGAAAATACAGAAGAGGAGAAGGGAAGTGAGGAGGAGACAGTTGTGAAGCCACCCATGCCTCCGTCAAAGGAGAATAAACCCAGAATAAGTGCCAGTGGGGATGCCAGTGAAGACACTGCCACAGAGAATGGTGAGTCCGAAGCAGTTACCACTCCTGGCAAGTCCAGTCCAGTTCAAGGTGAGAAAGATGCTCCTGAAATCGTCCATCCTCCCAGTCCACCATCCAAAGACATGAAACCCAAGCAGGCAATCAGCTTAAGTGATAAAGAAATTCTTTCAGAAGATGATGAAGGTTTTAAAAGTAAGGAAAATGAGGAAGATGAGGCAGAATCAGGTAAGACAGAAGACGAACCATTCATACTCTCAAATAAAGTCCCAAAGCCTCAAGGAGTCATGTGGGATTCACCTTCTTCAGCAGTGGAGAAAAGTTCTGTTGACCAAAATGCTAATAAATCTGCTGAAAGTGTAGTAACTACAGTAACACTTGAACCTGCAAAACCTGCCAATGAACTCAAATTAACTCCACATTCAACTCCAGAGGCTATTAAAAAGAGTGCTGCCCCCCCTGCTCCACCAAAAAAGAAACCTCTTAAACCACCTGTCGTAACAGAGAACCAAGCGGTCCAGGACGACCCTGTGGTCTCAGCTGTGTCATCCTCAGTTGAAAAAGGCTCTGACAATGTGCCATCAGATGAAACAAAACCTGCCACTCAAGAACCAAAAGAAGAGCGTAAGATTGTTATCCTGCGTCTCAGTAATTCAGGAGCAAGTGAGGAACCGGATGATATATCTGGAGTGGAAGCGGAAGTAAAGTCTATAGACAGTGGTCAGCTCTCTGCTGAAGACTCTGAAAGTAGTGAGCAAGTTACGCCATCCACAGATAAGCTGCAAAGTAGTCTGGAAGTCTTAGATGGTGTGACCAGCGAAGAGGAACTGGAGACACCAGACAGCAAGATCCAGAAAATGGAGGATCCACTTTCAGCCATCCTAACTGTTAAGCTCGAAGCCACTATGGATGACTCCATCCCAGTTGCTGCAGAAAGTACATGCACCCCTCAGATCTCCAGCCCTGCTGCATCACTGAACTCCTCCATCAAGAAACGGTCTGCATCCACGGGAGACCTTCTTGAGGAGATGAAGGGCTTGCAAAGTAAAGTGTCCATGGAGCTTGAGGAGACAGGAGAGCTGCTCGGTAAAATAGCACCCAGAGGGTCCCCTGAAGCCGGACAAGACAGCGAGGGGGTAACAGACCCAGAGATCCTTCTTGCTACAGCAATGGAGAAACTTAAGAAAGCTGACGAGTTCCTGAGAGAAGCCAAGAGTTTTAAAGAGCAGGAGAACAAGAGCAATAGAACAAGCTGGTAATTGCAGAAGATAAAAATATTGGGGTAATGTTATGTTAATGGAATTAATGGAATCACAAAACCTACAAATGATCAAGTGCAATTATACCCCATAACTTTTTACACAGGACCACCGCATAGTTAATGGGTCCATCTAAAACTGTTTCATAACCAGGTACCATGGATTAAACTAGGGATCCAATACTGAGTATTGATATCAAACCAACATTGCCCAGAAATGTTGGATCAATGAATCCCTGAATTAAACTTTTAAACGTGATTTATGAGCCCAGTTGATGTACTTGATGACGGAGATTGTGGAAACATAAGCATGACTGCTTCTCAGTGGATGTCAGCTTGTATTCTTGCTTTCAGAATTGTATTCTTTGATGTTTTCTGCACTGGGTTAACATGACGCTTATCCTCATGTCAGTTTGACAGTTTTCAGTTAAAGGCCTCCAGCACTGGTATCCAACTAGCActtaaaattatgattatggTAATTTAATAGAATAGTGTTGCACTCAAGTTTCCCTGCTGTGTTATATGAGCTGTACTACAGTACAGCGCTTAACCACCTTAGAGCATCTTACTTTAGTGTtccacacactatcacacaagCAAGGTCACATGATAATGAACCTAGTGTCAGGTTACTTAGCctgatgttaaaaataatgcagTGGCCTTGTTGAGGTTTTAAGATAAAGTACATGGGAACTAGCAACTTCCTGTGTGATATACATCCTTTTATCCATTTCACAGTTTATACAGAGAGCATACATATTTTCATACTGACAGTGAGAATGCAATTTGAATTCCTCTGCTTATTTCTAATTGGTTACCATATATACCGTATTATGCTAACAGCAATGCTAACTTTCCATTGTCTTTTtaagtgttctttttttaagcGTCAGGGCGTGTGCCATTTTAGTTTGTTATTATCAGTGTTTTTATGTGTAGAAAATGCAGTATGTGATCCAGTTACTCAGTAATAACAACCCCCTTTTTGTATGAAATTCTGGTTatatattaatactttatttttatttcaaacaaaaaaattattagacACGTGAACAGGTCATGTGGTACAGGTCATAGCCCTGCATTTATAGGTGTAGCCTACTTACCAGAACATTGCCGAAACATGATTCAAAGAACCTAAAGTATTTTTCTGTGAGCCTCCACataacatttatagttactttgtGTAGCAATAtattagctctttttttttttttttataaaggatTTCTTTTTGTAAATAACATGTCTACCAATGAATTGCTTAATATTTAAGTTATTAATGTTCTGGCATCCTGGTTCCTGTTTCTAATATCAAATTTACTCAGAGATCCCAGTGTACTGATAAATTATGTTTACCATTAAAACTATAAGAAGATCTATgattatatattgtaatatattgtcAGTGACTGCATTTACTAACTGGACTAATAAGTTTCCTTGATGTCTTTTgtttaatgtgcaaaaaaagatttttaacacACTGCTTGCTAAGCATGTCTTAATAAAAACGTCTTCCCTA

Function

symbol description
plekho2 Orthologous to human PLEKHO2 (pleckstrin homology domain containing O2).

NR:

description
PREDICTED: pleckstrin homology domain-containing family O member 2-like

GO: NA

KEGG:

id description
K24022 PLEKHO; pleckstrin homology domain-containing family O

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026930526.2 True 4139 mRNA 0.42 6 8596180 8612306

Neighbor

gene id symbol gene type direction distance location
ankdd1a ankdd1a coding downstream 6828 8572475 ~ 8589352 (-)
clpxa clpx,clpxa,LOC107733949,LOC107737000,LOC107594724,LOC107600713 coding downstream 31272 8550368 ~ 8564908 (-)
pdcd7 pdcd7 coding downstream 46569 8544942 ~ 8549611 (-)
ubap1lb ubap1l coding downstream 52205 8534968 ~ 8543975 (-)
rasl12 rasl12,LOC107600716,LOC107737003,LOC107685213 coding downstream 66737 8522608 ~ 8529443 (-)
lrrk1 lrrk1,LOC106593346,LOC106562602 coding upstream 195281 8807587 ~ 8924385 (-)
trnae-uuc_3 NA coding upstream 278321 8890627 ~ 8890698 (-)
aldh1a3 aldh1a3,LOC107692006,LOC107742307,LOC107553814,LOC106562593,LOC107755645,LOC107662254 coding upstream 314506 8926812 ~ 8950809 (-)
mesd mesdc2,LOC107591313,LOC107737020,LOC107693043,LOC107553745,LOC107709495 coding upstream 1146346 9758652 ~ 9768100 (-)
stard5 stard5,star5,LOC107691451,LOC107709494 coding upstream 1215642 9827948 ~ 9835960 (-)
G178227 NA non-coding downstream 2775 8593186 ~ 8593405 (-)
G178208 NA non-coding downstream 74095 8521801 ~ 8522085 (-)
G178057 NA non-coding downstream 272016 8323619 ~ 8324164 (-)
LOC113536653 NA non-coding downstream 320820 8271107 ~ 8275360 (-)
G177807 NA non-coding downstream 669122 7926293 ~ 7927058 (-)
G178398 NA non-coding upstream 98871 8711177 ~ 8712118 (-)
G178501 NA non-coding upstream 391338 9003644 ~ 9003852 (-)
G178673 NA non-coding upstream 574765 9187071 ~ 9189914 (-)
G178679 NA non-coding upstream 585294 9197600 ~ 9197805 (-)
G178867 NA non-coding upstream 697918 9310224 ~ 9311903 (-)
trnar-acg_8 NA other downstream 348418 8247690 ~ 8247762 (-)
trnar-acg_7 NA other downstream 349405 8246703 ~ 8246775 (-)
trnar-ucg_7 NA other downstream 351459 8244649 ~ 8244721 (-)
igf1rb LOC108271091 other downstream 831750 7675916 ~ 7764430 (-)
si:ch1073-365p7.2 NA other downstream 1007365 7580434 ~ 7588815 (-)
asb7 asb7,LOC107755647,LOC107662256,LOC107742335 other upstream 370876 8983182 ~ 8995120 (-)
mthfs mthfs,LOC102796869 other upstream 708660 9320966 ~ 9336186 (-)
LOC113536412 NA other upstream 775185 9387491 ~ 9407218 (-)
G178942 NA other upstream 910110 9522416 ~ 9523330 (-)
G179035 NA other upstream 1201586 9813892 ~ 9815225 (-)

Expression


Co-expression Network