abhd2a (abhd2a,LOC108270704,LOC108428500,LOC107733946,LOC107685211,LOC107662289,LOC107737001)


Basic Information

Item Value
gene id abhd2a
gene name abhd2a,LOC108270704,LOC108428500,LOC107733946,LOC107685211,LOC107662289,LOC107737001
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 8491252 ~ 8508330 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026930543.2
GTTGCTGTCTTTAACTGTAATCGGGATGtgagcgcgagagagagagacggaatCTGCTAGAAAGGGACAGCAGCTAAATGCGGACATAAATATAGATCCAGGTTGTCCTTATGGGAAGGTGTAGAGACAGCTAACCTGGGAGAGAGAGCTGCTGGTGAGAGGAAAAGGTTGGACCTGATCACTGTGACCACTCAGTCTTCTTTATCCAAGCATAAGGGATTAGAGTCTAGAAATCTGCACAAGCAACAGAGCCAACCATGAGCACTCACGACTCGGAGGCGTACACGGTGGCGCCGGAGATGCCGGCCATGTTCGACGGGATGAAGCTGGCGGCCGTCGCCACCGTGCTCTACATCATCGTCCGGTGCCTGAATCTGAAAAGCCCCACCGCACCCCCGGACATCACGTGCCAGGACACGCCGCTCAACCGCTTCCTGCTTAAATCCTGCCCCCTTCTGACCAAAGAATACATTCCTCCACTGTTGTGGGGGAAAAGTGGCCATTTACAGACCGCTCTGTACGGAAAGCTGGGCCGCGTGAGTTCACCGCACCCAACCGGCCTGCGCAAGTATCTGCCCATGCAGGATGGCGCCACAGCGACCTTTGATCTCTTCGAACCTCTGGCAGATCATCAGAGCGGAGCGGACATCACCATGGTTATCTGCCCGGGCATCGGGAACCACAGCGAGAAGCACTACATCCGCACCTTTGTGGATTACTCGCAGAAGCAAGGCTACCGTTGCGCCGTGCTCAACCACCTCGGGGCCTTGCCCAACATCGAGCTCACTTCCCCCCGCATGTTCACCTATGGCTGTACATGGGAGTTTGCAGCCATGGTGGGCTACATAAAGAAGACCTATCCCCAGAGCCAGCTCATCGTGGTGGGCTTCAGTCTCGGTGGCAACATCGTCTGCAAATTCCTGGGGGAGAACCATGCCAATCAGGAGCGTGTGCTGTGCTGCGTGAGCGTGTGCCAGGGCTACAGCGCACTCAGGGCTCAGGAGACCTTTCTGCAGTGGGACCAGTGCCGGCGCTTCTATAACTTCCTCATGGCTGACAACATGAAGAAGATCATTCTGTCACACAGGGGCAGTCTGTTTGGAGGAGGCTCTCCTAAGATGGTAGACGCAGATCTGAGACGCCTTTTCACTGCCACCTCTCTCATGCAGATCGATGACAACATCATGAGAAAATTCCATGGGCACAATTCATTAAAAGAGTACTATGAGAAGGAGAGCTGTGTGCACTACATTCACAATGTGAATGTTCCACTCTTACTGGTGAACTCCGCTGATGACCCTCTCGTACACCAGTCTCTTCTCACCATCCCGCGCACACTCGCAGaaaagaaagagaatgtgaTCTTTGCCTTGACGCTGCACGGCGGCCACCTGGGCTTCTTCGAGGGTGCTGTTCTCTTTCCGCAGCCTCTCACCTGGATGGATAAGGTCATTGTGGCGTACACCAATGCCCTCTGCCAGTGGCAGAAGCAGAAGCCAGCATGCCAAAGCCAGGATGCCCAAGCCTCAGGGGGCACGTGCTTGAACACTACTTCCTAAGCTTTGACCTCTGCCCTCTGTCGATTCATGCCCATACGCCACCAAACCACTCAGACCTTTCTGACCGGTCTCATCTTATCTTACACACCAAAAAAAGCATCTTGATGATCAGTGGTAgagaaaatgtttcatatttCGGGATCGCTCACATGTATATGGGCACAAAGACGTTAGAGAGGATGATGTGAGGGCAGCGGTCTGCGTATACCATATTTTCTGGACTTAAAGATGCTATGACTTAATACAGTGACGCTAATTATAAGTACATTTGTTCGTGTTTTTATGGAAAGGAACACAAACCTTAGTTTGGCACTAACATAACGGAAATAAGCTTTCAGCACCAATATGTGTGGCCTGAGAAAAGTCTACCTGGTGAAATTTTGACCTTTTAGACTATATATAGCTCTGAAAGctacagactttcctgagctATATATAGAgctatagcattttaaaatcaggttacccccaaaagtgaaaaattgcatttaaagatccAATTCAGACTATGGTGTAGGAGCATCGCGGACATTTTGGCAACCGTTATTTGAGCACAAATTGAATTGATTAagcttatgtccattttgctacAGCTATCCAAGAGCTTTATTAAAGCGTAACATTCACCATGTGACTTCTTGATAAGGATGGACTTACAGACAGAACCAGTTAGCTAGGTTACACTAATGGCGTCTCTAAAGTGCCATTTTGGAGgctgtaaaaacatttaaaaaatgcctgCTGCATTAAGCCAACTTACACAGTGAGTTGAATTTCCACACAGACTTGCGTCTTACATGCCGAAGCAACTTAATGTCTGGAAAATATGGTACACGTTGTCGTATAGTTTAAATATGTCAATAAATGCACTGGCCctagtgtgtgtaaaagaagTTAGCTTG

Function

symbol description
abhd2a Predicted to enable carboxylic ester hydrolase activity; hormone binding activity; and steroid hormone receptor activity. Predicted to be involved in several processes, including medium-chain fatty acid metabolic process; response to steroid hormone; and sperm capacitation. Predicted to act upstream of or within lipid catabolic process. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in sperm flagellum and sperm plasma membrane. Orthologous to human ABHD2 (abhydrolase domain containing 2, acylglycerol lipase).

NR:

description
PREDICTED: abhydrolase domain-containing protein 2-A

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13697 ABHD2; abhydrolase domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026930543.2 True 2461 mRNA 0.49 11 8491252 8508330

Neighbor

gene id symbol gene type direction distance location
LOC113536763 LOC108270703 coding downstream 21820 8453004 ~ 8469432 (-)
furina furina,LOC108270701,LOC108428498,LOC107737005,LOC107733942,LOC107685214,LOC107662279 coding downstream 40000 8373495 ~ 8451252 (-)
fes fes,LOC107733944,LOC107685217,LOC107600721,LOC107594730 coding downstream 124265 8330088 ~ 8366987 (-)
LOC113536672 LOC108271109,LOC107733936,LOC107662287,LOC107594765,LOC107600722,LOC107685235 coding downstream 178758 8307279 ~ 8312494 (-)
trnar-acg_5 NA coding downstream 248449 8242731 ~ 8242803 (-)
rasl12 rasl12,LOC107600716,LOC107737003,LOC107685213 coding upstream 14278 8522608 ~ 8529443 (-)
ubap1lb ubap1l coding upstream 26638 8534968 ~ 8543975 (-)
pdcd7 pdcd7 coding upstream 36612 8544942 ~ 8549611 (-)
clpxa clpx,clpxa,LOC107733949,LOC107737000,LOC107594724,LOC107600713 coding upstream 42038 8550368 ~ 8564908 (-)
ankdd1a ankdd1a coding upstream 64145 8572475 ~ 8589352 (-)
G178057 NA non-coding downstream 167088 8323619 ~ 8324164 (-)
LOC113536653 NA non-coding downstream 215892 8271107 ~ 8275360 (-)
G177807 NA non-coding downstream 564194 7926293 ~ 7927058 (-)
G177729 NA non-coding downstream 736234 7707511 ~ 7755018 (-)
G178208 NA non-coding upstream 13471 8521801 ~ 8522085 (-)
G178227 NA non-coding upstream 84856 8593186 ~ 8593405 (-)
G178398 NA non-coding upstream 202847 8711177 ~ 8712118 (-)
G178501 NA non-coding upstream 495314 9003644 ~ 9003852 (-)
G178673 NA non-coding upstream 678741 9187071 ~ 9189914 (-)
trnar-acg_8 NA other downstream 243490 8247690 ~ 8247762 (-)
trnar-acg_7 NA other downstream 244477 8246703 ~ 8246775 (-)
trnar-ucg_7 NA other downstream 246531 8244649 ~ 8244721 (-)
igf1rb LOC108271091 other downstream 726822 7675916 ~ 7764430 (-)
si:ch1073-365p7.2 NA other downstream 902437 7580434 ~ 7588815 (-)
asb7 asb7,LOC107755647,LOC107662256,LOC107742335 other upstream 474852 8983182 ~ 8995120 (-)
mthfs mthfs,LOC102796869 other upstream 812636 9320966 ~ 9336186 (-)
LOC113536412 NA other upstream 879161 9387491 ~ 9407218 (-)
G178942 NA other upstream 1014086 9522416 ~ 9523330 (-)
G179035 NA other upstream 1305562 9813892 ~ 9815225 (-)

Expression


Co-expression Network