ttc14 (ttc14)


Basic Information

Item Value
gene id ttc14
gene name ttc14
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 11551526 ~ 11562360 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026930554.2
TATCTAACTAGCTTAGAAGCTTCTTGTCACAGTATTTTTCTCTGCACACATATCCAGCAGCTAGGTAGTGCTAAAAAAGATCATACCTCTACAAATATCTATTATCTACAGTGCTGAAAATGCCTACAAATGAAATATCGGAAGgttggagtgtgtgtacCGGTGTGAGGCGAATGTGTTGTTGAACATGGATAGAGATTTACTCAGGCAGTCTGTGGCATTTCATGGACAGAGTCTGTTTACTCTGTTAAAATGTGAACAGAGTGAAAATCCTGACTTTAAACATGTCACAGCCGATCTCGCCAAATCTGTGAACCAGAGGGATAAAGAAGATGACAGTCCTATTGTGGAACAGTTTATTGCAAGGAAAGCAGACCTTCTGTTTGCTCCATCATGGAAATCAACCACACCTGGAGAAGAAGAGTGGCAGGAAGAGACCCAAGAGCCATATGCCATCATGCCTCCTTTGGAGCAGTTCATGGACGTTTCTTATAACGAGAGGAGAGAGCTTTTCTACAGAGACGTGGAGCGAGGCGATGTAGTCATCGGCAGAATTACATCAATCCGAGATTTCGGGTTCTTTGTTAATCTTCTCTGCACTGCTGGGGGAATGGAGAGGGACGTCGAAGATCTGGAGATCACGGGTCTGTGTCCAATCAGAGATGTCCCATCAACTGGAAATCACGATGATCCTTTGTCTTATTTCCAGATTGGGGATTTAATTAGAGCTGGTGTGAAGGACATCGACCGCTATCACGAGAAGCTGACGATCTCACTTTATTCCACCTCTCTGGCCTTGAACATGGAGCGAACCAAATTGGGTGTAATAAGCAAAGAAGATTTACCTCTTCACTACACTCGTGGTGAACAGGTGACCACAGACAGCAGAGAGTCATACGAGATGTTACTCCAGAGTTCACTCGGCTTCTCTAACCCGTCCAACGTGGACTATTTGCTCGGCAAGCTGGGAATCAGCGACACACAATCTCACTCCCTAATGAGAGGATTACAGAGtaaaCGTTTCATGGAAGATGATTTTGCAAGTGCAATCCGGAAGAAGCAGTCTGCTTCGTGGGCATTGAAGTGTGTGAAAGCTGGTGTGAATCATTTCAAATCAGGCCGCCATGTAGAAGCAATGAATGAGTACAACAAGGCTTTGGAGATCGACACCAATAATGTTGAGGCACTCGTAGCACGTGGCGCTCTATATGCCACTAAAGGCAGCTTGATGAAAGCTATCAGTGACTTTGAGCTAGCTTTGGAAAGCTGCCCAACACACAGGAACGCTAAGAAATATCTGTGCCAAACACTGGTGGAACGAGGTGGCCAgctggaggaagaggagaagctGATTACAGCAGAAGGGCTTTATAAGAAAGCTATAGCTTTAGACGACACATTTCATGAAGCGAAGGAAGCACTGAGGAAGCTACAGATGCACATCCAGAAAACTCTTAAACTGAAAGCCGAAGAGGCTGCAAAGGAGAAGGAAAAGCAACCAACTGCAGAGACGAGCGCAGAAAAATTACGTAAGAtcttaaaagaagaaaaaaggatgaaaaagaaaaggaagaggtATGACTCCACGTCAGAGACGTCCTCGAGCTCTGATTCCTCCAGCGACGACTCGTCCAGTCGCAAAAAACCCAAAAAGCGAAAGCACAAACGCAGACGCTCCTCACACAGTGGTAAAAAACACAAGCAAAGTGTTTCATCACgtggtgatgaggaggaggaggagcactACCCTGTTCCTGCTAACACCTCAGCATCCTTCATTAATGAGAAACAAACCCTCATTAAACTGCTCGATGGAGAGAACAGAGCTGAACACCGAAGACTGTCTCATGAAAAAAGCAGAGAAGGTAGGTTTGAAGATGACCCCTTCACCCGGAGCCCTGAGACTGAGGACAggaaggtcaaaggtcaacatGCGTGCCTCAGTGGTTTAAATGGCCGGGACAAAGACACATACAGAGAACGCAGAAGATCTGAAGACGAACACAGCACTCTGCCGGAAAGTTGTAGAAGCTCACGCATCACTTCCTGCAGGAAGGATTCCTCCTCCTCGGCCTATTCAGAGACCTCGCGCAAATCTGACTCGCGTGATTTCGACTCGCGCAAATCCAGCTCTCGCACGTCCGACTCACGCAATTCTCACTCATCTGACTCTCGCAGATCAGACTCTTATAAATCTGGAAGCCATGGGAAGTCAGAGGTCAGGGAAGGGAATGATTGGAACGATCGTAGATTAAGCAGCAGTGATGTGAGCAAAGCCTCGGAGGGAAACCAGAAAAAGAATTTACCCAACAGTTTATTGGATATCTTTAATCAGATTGCTGAatttgagaaagaaagaaagcagaagaaatgaatgaaatgctaTTTTCTGTGTTGTCGCAGTAGCTTCTCGccttgaaggaaaaaaatagagatGGAGTGGTAAACATGAGATAATCCAGACCTGCCAATCTTTACACATTCTGTGTAGGAGTTCTTGCACAGGAATATGCTGATGCAAGTTATTGCTAAAAAATGGAAGATGCACTGATGTGCGATCCTCACTTTCTGTcatggtaaatggagaatgtgtgTCTTCCACTTGGCTAACATTAGACACGCAGACACGTAACAACAGTTAAATATACttgttatatattaaatataatagaGGAACATATTAAACGAAAGTGATTTGGacgaaagagaaaaaaggctgaCAGGAAAAAACTAAAATAGTCCTACAACAAAGTCTAACTAATCTAACCTTACAACAAAATCTAacttaaaaaaactaaaaaaaaattaattttaatgataaCGGTAATTAGAAAGTGTTTAAAAACGCTGTTTGTTCTGCTGCACCGGTTAGCAGAGACATGTTCAAGCAGCAGATCAAAATGTTGGCCATGTGGAAACATTTTCTGCTTTCTACCAATGGACTTTAGACAAGCGATTCGTAAATGAATGATTTTGAAAATATACGTGACTAAGCATTATTCTTCTTCGAGATTGGCAGGTCTGGATACACCGATGATGCCttgtaataaacaaacataatgGTACCATGTGTTAATGTAGCAGTTATCACTTctttatgtgttattttttgttttctgaaatgaaatgcttccttgacaaaaaaaaactttgtagtTAAAAACTTTAGCAAAGTGGTTCATAGGTTAAAAATAAGCTCTTGTGAGTTTAAAACTACAGTCAGTACATTTCaatacattcatgcagtttgtTGTCATTCTTTCTCAGAAGAGGGCTATAAATTGTGCAGAATGTAATCTGGTGTGGAAATGTACTGATTGTAGTTTAGCCAATAATTAGATGTATATCTGTCGACTTCActgatgctttttgtttctccGTCAGTCTGATTAATGTTTTTAGGAATGTCTGTACAACATGTAAACCAATATATCCAAGCATCTCCTAATAAACTGAGGGTTAAAGCAAAAGTAA

Function

symbol description
ttc14 Predicted to enable nucleic acid binding activity. Orthologous to human TTC14 (tetratricopeptide repeat domain 14).

NR:

description
tetratricopeptide repeat protein 14-like isoform X2

GO:

id name namespace
GO:0003723 RNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026930554.2 True 3474 mRNA 0.42 13 11551526 11562360

Neighbor

gene id symbol gene type direction distance location
htr2b htr2b coding upstream 94118 11446953 ~ 11457408 (+)
ncl ncl coding upstream 131709 11409068 ~ 11419817 (+)
LOC113536800 NA coding upstream 133283 11418114 ~ 11418243 (+)
LOC117598448 NA coding upstream 138886 11412574 ~ 11412640 (+)
LOC113536790 NA coding upstream 139399 11412060 ~ 11412127 (+)
dnajc19 dnajc19,LOC107727073 coding downstream 293259 11855619 ~ 11861835 (+)
atp11b atp11b,si:dkey-211e20.10,LOC106613933,LOC107566880,LOC107747927 coding downstream 338036 11900396 ~ 11958703 (+)
kng1 NA coding downstream 423062 11985422 ~ 11992116 (+)
cers1 cers1,LOC107718480 coding downstream 434096 11996456 ~ 12019500 (+)
LOC113536486 myo9b coding downstream 510884 12073244 ~ 12135868 (+)
G179779 NA non-coding upstream 21523 11478348 ~ 11530003 (+)
G179787 NA non-coding upstream 27167 11521803 ~ 11524359 (+)
G179786 NA non-coding upstream 32587 11516747 ~ 11518939 (+)
G179775 NA non-coding upstream 76379 11473568 ~ 11475147 (+)
G179773 NA non-coding upstream 78319 11471346 ~ 11473207 (+)
G179834 NA non-coding downstream 4998 11567358 ~ 11567567 (+)
G179858 NA non-coding downstream 137322 11699682 ~ 11699975 (+)
LOC117598421 NA non-coding downstream 264569 11826929 ~ 11828538 (+)
LOC117598401 NA non-coding downstream 469640 12032000 ~ 12037456 (+)
LOC113536506 NA non-coding downstream 483444 12045804 ~ 12053150 (+)
G179758 psmd1 other upstream 120629 11428613 ~ 11430897 (+)
G179643 NA other upstream 389929 11160346 ~ 11161597 (+)
G179632 NA other upstream 452715 11096153 ~ 11098811 (+)
LOC113536516 ephb3,LOC107687281,LOC107668659,LOC102790569,LOC107744192 other upstream 700603 10810670 ~ 10850923 (+)
LOC113536578 NA other upstream 3280776 8253421 ~ 8270750 (+)
G180121 NA other downstream 492598 12054958 ~ 12055749 (+)
timm13 timm13,LOC107731338,LOC106573564,LOC107593051 other downstream 765692 12328052 ~ 12333681 (+)
cdc14ab cdc14a other downstream 950528 12512888 ~ 12561781 (+)
LOC117598398 NA other downstream 1010797 12573157 ~ 12602064 (+)
ankmy1 ankmy1 other downstream 1534013 13096373 ~ 13111706 (+)

Expression


Co-expression Network