nqo1 (nqo1)


Basic Information

Item Value
gene id nqo1
gene name nqo1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 5419996 ~ 5446722 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026930558.2
TCATTTGCAGAAAGTTTCCTTTAACTGGAATGAGTACAAAAAGGATGGGCTgatgtcacatgaccatcatCTGACTAATCACAGTCCAGTCACATTTCACAGCAGCAGTGAAATAGTGCGGTGCGTGGTTTCACAGCAGAGCATGAGAAGTGAGCCAGCTGTGCACTGTTTACATTAACACCTGTAGTCCTGCGAGCCAGTGATCCGCCTCTCCATTGTAGTCGTGCGTCGATTGTGCAACCACAACATCACCACAGAGCTTCTCACGCGAGTCCTGCTCAAGATCAATCATCTCCCCAGATCATTTCCAGTGCAGTTATCCAACCTGCTAGGTCTGCTCCACATACCTCTCAACCAGGAACAGCAACAATGGCAGATAAGACGGTGCTGATTGTGTATGCACATCAGAGTCCGAAGTCTTTTAACTGTGCGGTGAAGGATACGACTGTGAAGGCTCTCACCGATCAGGGCTGTAAGGTCATCGTGTCGGATCTCTATGCCATGAAATTCCGAGCTGTAGCAACAGCAGATGATGTCAAAGGTAAGCTGAAGAACCCTCAACACTTCCTCTACAACGAGGAGACCATGCTCGCCTGGAAGGAGGGCAGACTGAGTGATGACATCAAAGAAGAGCACCGTAAACTGGAGCAAGCTGACCTTGTCATCTTCCAGTTTCCACTTTACTGGTTCAGTGTCCCTGCTATAATGAAAGGCTGGATAGACCGAGTGCTGACTCTGGGATTCGCCTACACTCTGCAGAACCTCTACGACAACGGCATGTTCAAGaaGAAAAAGGCCATGTTGTCATTCACTACTGGAGGAATGGAGTCCATGTACCTGCCAGACGGCCTCAATGGAGATATCAATGTTTCTCTGTGGCCCTTACAgAGTGGAGTTCTGCGCTTCTGTGGTTTTCAGGTTCTGGCCCCGCAGATCTTCTGGAGTCCTGCGCACACTCCTGCTGATGCGAGAGCGGCCTTGTTGGAGGTGTGGAAAACCAGACTTCAAGGACTGCTGGATGAAAAGCCTCTGTCCTTTGCACCCACCGGGTTCTTTGATCTCAACTTCCAGGCAGGGTTCAGACTCCGGTCAGAGGTGAAGGAGGAGTTTGCCTCTAAACCATACGGCCTGACCACAGCACACCACCTGGGAAAACCGCTTCCTCCAAACAACCAGACCAAGGCTGAATAAGGAGCCGTCCGAGCCGTCTGATTAAACAAACCCCTGAAGATACACGCCTTTGCAGCCGAGTCATAAATCTGCAGACTTGAAGAATGCACACAACTAACCTGAAATATGATGATTTCATTTTGAAACTTATTTGCAATTGATCTAAGATTAACCTTATTTAATACttaattcaaatatataaacactaatTTCTAAAAACAGTACAGGCAACAAATATACTACTGTAACTTAACCTGTATAcatgtttgtgtatgcatgttCTTATTTTGACTTCTGTACACCTTTGATCAGTAACGCAATAAACCTTTGAACAAACTGGA
>XM_026930559.2
AGGTCATTTGCAGAAAGTTTCCTTTAACTGGAATGAGTACAAAAAGGATGGGCTgatgtcacatgaccatcatCTGACTAATCACAGTCCAGTCACATTTCACAGCAGCAGTGAAATAGTGCGGTGCGTGGTTTCACAGCAGAGCATGAGAAGTGAGCCAGCTGTGCACTGTTTACATTAACACCTGTAGTCCTGCGAGCCAGTGATCCGCCTCTCCATTGTAGTCGTGCGTCGATTGTGCAACCACAACATCACCACAGAGCTTCTCACGCGAGTCCTGCTCAAGATCAATCATCTCCCCAGATCATTTCCAGTGCAGTTATCCAACCTGCTAGGTCTGCTCCACATACCTCTCAACCAGGAACAGCAACAATGGATAAGACGGTGCTGATTGTGTATGCACATCAGAGTCCGAAGTCTTTTAACTGTGCGGTGAAGGATACGACTGTGAAGGCTCTCACCGATCAGGGCTGTAAGGTCATCGTGTCGGATCTCTATGCCATGAAATTCCGAGCTGTAGCAACAGCAGATGATGTCAAAGGTAAGCTGAAGAACCCTCAACACTTCCTCTACAACGAGGAGACCATGCTCGCCTGGAAGGAGGGCAGACTGAGTGATGACATCAAAGAAGAGCACCGTAAACTGGAGCAAGCTGACCTTGTCATCTTCCAGTTTCCACTTTACTGGTTCAGTGTCCCTGCTATAATGAAAGGCTGGATAGACCGAGTGCTGACTCTGGGATTCGCCTACACTCTGCAGAACCTCTACGACAACGGCATGTTCAAGaaGAAAAAGGCCATGTTGTCATTCACTACTGGAGGAATGGAGTCCATGTACCTGCCAGACGGCCTCAATGGAGATATCAATGTTTCTCTGTGGCCCTTACAgAGTGGAGTTCTGCGCTTCTGTGGTTTTCAGGTTCTGGCCCCGCAGATCTTCTGGAGTCCTGCGCACACTCCTGCTGATGCGAGAGCGGCCTTGTTGGAGGTGTGGAAAACCAGACTTCAAGGACTGCTGGATGAAAAGCCTCTGTCCTTTGCACCCACCGGGTTCTTTGATCTCAACTTCCAGGCAGGGTTCAGACTCCGGTCAGAGGTGAAGGAGGAGTTTGCCTCTAAACCATACGGCCTGACCACAGCACACCACCTGGGAAAACCGCTTCCTCCAAACAACCAGACCAAGGCTGAATAAGGAGCCGTCCGAGCCGTCTGATTAAACAAACCCCTGAAGATACACGCCTTTGCAGCCGAGTCATAAATCTGCAGACTTGAAGAATGCACACAACTAACCTGAAATATGATGATTTCATTTTGAAACTTATTTGCAATTGATCTAAGATTAACCTTATTTAATACttaattcaaatatataaacactaatTTCTAAAAACAGTACAGGCAACAAATATACTACTGTAACTTAACCTGTATAcatgtttgtgtatgcatgttCTTATTTTGACTTCTGTACACCTTTGATCAGTAACGCAATAAACCTTTGAACAAACTGGA
>XM_026930560.2
tttttttttttcttgtcctcACCTGCATGTCATGACTTCTAAATGCTGGTATGTCGCTAGCAAAGTACGTGACTGAAATACTTTACTTCATAATACTGCAGATAAGACGGTGCTGATTGTGTATGCACATCAGAGTCCGAAGTCTTTTAACTGTGCGGTGAAGGATACGACTGTGAAGGCTCTCACCGATCAGGGCTGTAAGGTCATCGTGTCGGATCTCTATGCCATGAAATTCCGAGCTGTAGCAACAGCAGATGATGTCAAAGGTAAGCTGAAGAACCCTCAACACTTCCTCTACAACGAGGAGACCATGCTCGCCTGGAAGGAGGGCAGACTGAGTGATGACATCAAAGAAGAGCACCGTAAACTGGAGCAAGCTGACCTTGTCATCTTCCAGTTTCCACTTTACTGGTTCAGTGTCCCTGCTATAATGAAAGGCTGGATAGACCGAGTGCTGACTCTGGGATTCGCCTACACTCTGCAGAACCTCTACGACAACGGCATGTTCAAGaaGAAAAAGGCCATGTTGTCATTCACTACTGGAGGAATGGAGTCCATGTACCTGCCAGACGGCCTCAATGGAGATATCAATGTTTCTCTGTGGCCCTTACAgAGTGGAGTTCTGCGCTTCTGTGGTTTTCAGGTTCTGGCCCCGCAGATCTTCTGGAGTCCTGCGCACACTCCTGCTGATGCGAGAGCGGCCTTGTTGGAGGTGTGGAAAACCAGACTTCAAGGACTGCTGGATGAAAAGCCTCTGTCCTTTGCACCCACCGGGTTCTTTGATCTCAACTTCCAGGCAGGGTTCAGACTCCGGTCAGAGGTGAAGGAGGAGTTTGCCTCTAAACCATACGGCCTGACCACAGCACACCACCTGGGAAAACCGCTTCCTCCAAACAACCAGACCAAGGCTGAATAAGGAGCCGTCCGAGCCGTCTGATTAAACAAACCCCTGAAGATACACGCCTTTGCAGCCGAGTCATAAATCTGCAGACTTGAAGAATGCACACAACTAACCTGAAATATGATGATTTCATTTTGAAACTTATTTGCAATTGATCTAAGATTAACCTTATTTAATACttaattcaaatatataaacactaatTTCTAAAAACAGTACAGGCAACAAATATACTACTGTAACTTAACCTGTATAcatgtttgtgtatgcatgttCTTATTTTGACTTCTGTACACCTTTGATCAGTAACGCAATAAACCTTTGAACAAACTGGA
>XM_034308720.1
GTTCAGGTTTTCATAGACCAGGTTTGGTTTTAGTCAGACCGAGCTCATGAAGACTCAGAGCTAATGAAGGCTCCTTCTCTTCGAAACACCATGGCTATGCCCTTTGGAAACCACTTGAGATAGCACTATGGTTACAGAGTGCAAATAACATCTCAGAAACAGCACCTCCCACATCTGACACCTGCAACACCAAACCTGTTGCACAATTTCACCTGCTTTAGTCAGAGTGCGTGTCGTCAGGAACACATGTATAGGGTGTGGCCAGATGAAGGAAGCAGGTAGTTTTTCTACATTTCTCCTCTGAAAAAGGTCGTGTCTTTCTGTGATAGTACAAAAGCTTTCATGTGCGCAAGGAAACAAGGCGTGCCAGATGACAGGGAACAAACCCACACTGTAGAAACGACAGAAAAATGGTGGAGGGCAACAGCAAAAGTGGAGAAAGAAGATAAGACGGTGCTGATTGTGTATGCACATCAGAGTCCGAAGTCTTTTAACTGTGCGGTGAAGGATACGACTGTGAAGGCTCTCACCGATCAGGGCTGTAAGGTCATCGTGTCGGATCTCTATGCCATGAAATTCCGAGCTGTAGCAACAGCAGATGATGTCAAAGGTAAGCTGAAGAACCCTCAACACTTCCTCTACAACGAGGAGACCATGCTCGCCTGGAAGGAGGGCAGACTGAGTGATGACATCAAAGAAGAGCACCGTAAACTGGAGCAAGCTGACCTTGTCATCTTCCAGTTTCCACTTTACTGGTTCAGTGTCCCTGCTATAATGAAAGGCTGGATAGACCGAGTGCTGACTCTGGGATTCGCCTACACTCTGCAGAACCTCTACGACAACGGCATGTTCAAGaaGAAAAAGGCCATGTTGTCATTCACTACTGGAGGAATGGAGTCCATGTACCTGCCAGACGGCCTCAATGGAGATATCAATGTTTCTCTGTGGCCCTTACAgAGTGGAGTTCTGCGCTTCTGTGGTTTTCAGGTTCTGGCCCCGCAGATCTTCTGGAGTCCTGCGCACACTCCTGCTGATGCGAGAGCGGCCTTGTTGGAGGTGTGGAAAACCAGACTTCAAGGACTGCTGGATGAAAAGCCTCTGTCCTTTGCACCCACCGGGTTCTTTGATCTCAACTTCCAGGCAGGGTTCAGACTCCGGTCAGAGGTGAAGGAGGAGTTTGCCTCTAAACCATACGGCCTGACCACAGCACACCACCTGGGAAAACCGCTTCCTCCAAACAACCAGACCAAGGCTGAATAAGGAGCCGTCCGAGCCGTCTGATTAAACAAACCCCTGAAGATACACGCCTTTGCAGCCGAGTCATAAATCTGCAGACTTGAAGAATGCACACAACTAACCTGAAATATGATGATTTCATTTTGAAACTTATTTGCAATTGATCTAAGATTAACCTTATTTAATACttaattcaaatatataaacactaatTTCTAAAAACAGTACAGGCAACAAATATACTACTGTAACTTAACCTGTATAcatgtttgtgtatgcatgttCTTATTTTGACTTCTGTACACCTTTGATCAGTAACGCAATAAACCTTTGAACAAACTGGA
>XM_034308721.1
ttttttttcttgtcctcACCTGCATGTCATGACTTCTAAATGCTGGTATGTCGCTAGCAAAGTACGTGACTGAAATACTTTACTTCATAATACTGTACAAAAGCTTTCATGTGCGCAAGGAAACAAGGCGTGCCAGATGACAGGGAACAAACCCACACTGTAGAAACGACAGAAAAATGGTGGAGGGCAACAGCAAAAGTGGAGAAAGAAGATAAGACGGTGCTGATTGTGTATGCACATCAGAGTCCGAAGTCTTTTAACTGTGCGGTGAAGGATACGACTGTGAAGGCTCTCACCGATCAGGGCTGTAAGGTCATCGTGTCGGATCTCTATGCCATGAAATTCCGAGCTGTAGCAACAGCAGATGATGTCAAAGGTAAGCTGAAGAACCCTCAACACTTCCTCTACAACGAGGAGACCATGCTCGCCTGGAAGGAGGGCAGACTGAGTGATGACATCAAAGAAGAGCACCGTAAACTGGAGCAAGCTGACCTTGTCATCTTCCAGTTTCCACTTTACTGGTTCAGTGTCCCTGCTATAATGAAAGGCTGGATAGACCGAGTGCTGACTCTGGGATTCGCCTACACTCTGCAGAACCTCTACGACAACGGCATGTTCAAGaaGAAAAAGGCCATGTTGTCATTCACTACTGGAGGAATGGAGTCCATGTACCTGCCAGACGGCCTCAATGGAGATATCAATGTTTCTCTGTGGCCCTTACAgAGTGGAGTTCTGCGCTTCTGTGGTTTTCAGGTTCTGGCCCCGCAGATCTTCTGGAGTCCTGCGCACACTCCTGCTGATGCGAGAGCGGCCTTGTTGGAGGTGTGGAAAACCAGACTTCAAGGACTGCTGGATGAAAAGCCTCTGTCCTTTGCACCCACCGGGTTCTTTGATCTCAACTTCCAGGCAGGGTTCAGACTCCGGTCAGAGGTGAAGGAGGAGTTTGCCTCTAAACCATACGGCCTGACCACAGCACACCACCTGGGAAAACCGCTTCCTCCAAACAACCAGACCAAGGCTGAATAAGGAGCCGTCCGAGCCGTCTGATTAAACAAACCCCTGAAGATACACGCCTTTGCAGCCGAGTCATAAATCTGCAGACTTGAAGAATGCACACAACTAACCTGAAATATGATGATTTCATTTTGAAACTTATTTGCAATTGATCTAAGATTAACCTTATTTAATACttaattcaaatatataaacactaatTTCTAAAAACAGTACAGGCAACAAATATACTACTGTAACTTAACCTGTATAcatgtttgtgtatgcatgttCTTATTTTGACTTCTGTACACCTTTGATCAGTAACGCAATAAACCTTTGAACAAACTGGA

Function

symbol description
nqo1 Predicted to enable NAD(P)H dehydrogenase (quinone) activity. Acts upstream of or within cellular response to xenobiotic stimulus. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in several diseases, including asthma; hematologic cancer (multiple); lung disease (multiple); macular degeneration; and small cell carcinoma. Orthologous to human NQO1 (NAD(P)H quinone dehydrogenase 1).

NR:

description
ribosyldihydronicotinamide dehydrogenase [quinone]-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0071466 cellular response to xenobiotic stimulus biological_process
GO:0003955 NAD(P)H dehydrogenase (quinone) activity molecular_function
GO:0004128 cytochrome-b5 reductase activity, acting on NAD(P)H molecular_function

KEGG:

id description
K00355 NQO1; NAD(P)H dehydrogenase (quinone)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026930558.2 False 1511 mRNA 0.47 6 5419996 5429430
XM_026930559.2 False 1511 mRNA 0.47 6 5419996 5429433
XM_026930560.2 False 1236 mRNA 0.45 6 5419996 5446722
XM_034308720.1 True 1580 mRNA 0.46 7 5419996 5445156
XM_034308721.1 False 1346 mRNA 0.46 7 5419996 5446719

Neighbor

gene id symbol gene type direction distance location
LOC113536772 LOC108270937,LOC108412780,LOC107730181,LOC107561442,LOC562097,LOC107663023,LOC106562562,LOC108250636 coding downstream 1315 5407596 ~ 5418681 (-)
sirt3 sirt3,LOC107663051 coding downstream 53761 5360418 ~ 5366235 (-)
cdhr5a LOC108270552,LOC108412775 coding downstream 94538 5318352 ~ 5325458 (-)
trnai-uau_2 NA coding downstream 105742 5314162 ~ 5314254 (-)
LOC113536575 adamts7 coding downstream 117645 5229326 ~ 5302351 (-)
dpep1 dpep1,LOC107730179 coding upstream 18951 5465673 ~ 5481287 (-)
hp LOC108270509 coding upstream 59195 5505917 ~ 5509942 (-)
dhodh dhodh,LOC107730177 coding upstream 90330 5537052 ~ 5545521 (-)
ist1 ist1,LOC107705324,LOC107730168,LOC107600347 coding upstream 119938 5566660 ~ 5573176 (-)
LOC113536546 hnrnpll,hnrll,LOC106564787 coding upstream 144352 5591074 ~ 5664681 (-)
G176354 NA non-coding downstream 12897 5304614 ~ 5407099 (-)
G176336 NA non-coding downstream 306728 5110114 ~ 5113268 (-)
G176029 NA non-coding downstream 572855 4840748 ~ 4847141 (-)
G176028 NA non-coding downstream 579303 4839988 ~ 4840693 (-)
G176015 NA non-coding downstream 683580 4732382 ~ 4736416 (-)
G176556 NA non-coding upstream 185104 5631826 ~ 5715020 (-)
G176817 NA non-coding upstream 636106 6082828 ~ 6167802 (-)
G176816 LOC108271104 non-coding upstream 725476 6172198 ~ 6176354 (-)
G176832 NA non-coding upstream 737613 6184335 ~ 6188288 (-)
G176855 NA non-coding upstream 814075 6260797 ~ 6261240 (-)
trip4 trip4 other downstream 223178 5139610 ~ 5196818 (-)
G176307 NA other downstream 339101 5079817 ~ 5080895 (-)
lto1 oraov1 other downstream 915667 4498946 ~ 4504329 (-)
bola3 bola3,LOC107686851,LOC107727091 other downstream 1423543 3992726 ~ 3996453 (-)
mical2a mical2 other downstream 1510103 3851847 ~ 3909893 (-)
LOC113536561 srsf7,LOC107665899,LOC107693014 other upstream 249658 5696380 ~ 5708304 (-)
LOC113536608 LOC108270551 other upstream 1410033 6856755 ~ 6861348 (-)
si:dkey-56d12.4 LOC108270721 other upstream 2033700 7480422 ~ 7484117 (-)
si:ch1073-365p7.2 NA other upstream 2133712 7580434 ~ 7588815 (-)
igf1rb LOC108271091 other upstream 2229194 7675916 ~ 7764430 (-)

Expression


Co-expression Network