ankdd1a (ankdd1a)


Basic Information

Item Value
gene id ankdd1a
gene name ankdd1a
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 8572475 ~ 8589352 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026930613.2
GCGAGGCAAGCGTGCTAACCACTAGGACACCGTGTCCTCTCGTGCGTCAATCCCACACAATGAAAAGATCATTTTTGTTTGCTTAACCATAACGCTGGGCAGGTGCAGGGGCTGGCTCGCTGTCGGAAAGCAGCAGGCTGAGCACTTCAGCACTATTTTCCTTCCTCCAGGGCGGAACTGTAGCGAAAAAACCTTTATATGTAACTGTATAGCGCCTTTTATACAATTTATAGTTTAGAGGCTAAACAGTAGATATTTGGTTTCCGTGACTTTAAGTGTGAGATGTGTAACGgtaatgaaaacatgaaagTGACTGACCATGAACCCCGCCTAGTCTGTTCAGGACGTTTTCGACACTGTTTGGTTCATATTCCTGAGTAAGCTGATCctgtaaaacactgaaacacgAATATTTCGAGAACATTACCAAGAGCTGCTCATGAATGTAGCTCAGGGAGGTTTAATACAACCTCGGAGGAACCGGAGCTAAGCGCCGCTAGCCGCTCGAGTCGTGTGAGGATTTGTCAAAcgctcatttatttatgtttacacaAATATATCTGCTACAGGATGGAGGACGGCTTGGCGTCAGAAGACGACATCTTGCTGCACTCGGAGAAGGTGTTTCACAATGCTGCAAAACGGAATGACACAGGAAAGATGCTGGAGCTTATTAGGAAGGGGGTGGACatcaaagttaaaaataaaGCAGACAGGAAGGCACTGCACTGGGCTGCAGGTGCAGGTAGTGAAGATGCTCTGCGTCTGCTGCTGGAGCACGACACTGAGCTGGATGATGCAGACAGTTTTGGCATGAGTGCACTGCTGCTGGCAGCGTGGTTCGGTCACCTTAAAATATTGCAGATCCTTGTCTCATCTGGTGCCAAACTCAACTGTGAAAACAAAAATGGGCTTAATCTTCTGCACTGTGCTGCCCAGCGAGGTCATATTCGTATTCTGGAGTACATCATGGAGGATCTGGAAGATGTACGACTTGACAGAGTTGACAAGTCAGGTAAGACAGCATTTCACCTGGCAGCAGAACATGGACAGTTGGAGGTGATGGAGTATCTTATTGGCATGGGCTGCGCTCACGACCTCAAGGACAAGGAGGAGAACACTGCACTCCATCTGGCAGCGAAACACGGCCATGCAGAGGTTCTCCAGAAGATTCTGGAAACAGGGGAGAACATCAATGAGAGGAATATTGATGGTCTGACCGCTTTACACTTGTCTGTGGATGGAGGGCATTATGACTGTGTCAGGCTGCTGCTTGAGGCTCACTGCAACATCAACGTACTcacaaatAGGAACATGACGGCTCTTCACTTTGCAGTCCAGCATGGATCTGAAAGAGAGGTCAGGCTGCTTGTAGAAGCTGGAGTAAGTGTGGACTCAGTGGACATTAACCATACCACCGCACTACACTTGGCAGTGTTCAACAACTACACAGAGATTGTTAAAATACTCATTGATGCAGAATGTGACCTAGATATACTTGATGAGCGACATCAAACAGCTCTGCACATAGCAGCAGAACACGGGCGCCAAAATATAGCTGAACTGATCCTCATTGCTGGGGTTAACCTCAAACTTCTCGACAAGCAGGGAAAGACATCACTGGACATTGCAGCCAGAGGCAATCATGTGAACGTGGTCGACATGATTATCAGAGCAGATAGATTTTATAAATGGGAACAGGACAATATGAGCTCCGCTGGATCGTTAGTGGGAAGAAATTTAAACTTCAAACAAGATCATCAGCAGGAGACACAGCATATTCGCTCCATCTTATGGAAGTTAGCCACCAAACACCTGAAAGCTGGGGAGTGGAAGACACTGGCGCAGCACTGGCACTTCACAGACGCGCACATCCGAGCCATAGAACATGAGTGGACAGGTACTAAAAGCTATAAGGACCATGGACATCGCATGCTGCTGATCTGGCTGCATGGTGTGTTGATTGCCAGAGAAAACCCCATTAAAGGCTTGTACGAAGGGCTGATGGGAATCTCAAGGATGGATCTGGCAGAGAGTACGCGACAGCAGGCCAATGCAGACCCCAACACTCCTAAGAAGTGCACAACAATGTGAAACAGTGTTGTCTTGAAACACGCTGAAGAAATTATGTTTACAGCAAATAATACAAGATGAAACACAGACCAGAGCTTAGTATGCAATAGAATATGAACCCAGTTTTCCTCAACAACACACTGATTCAGTGAGTTTTGAAGGGCTACTACAGTACCATCTGTTGATTCTTGCAACAATGAAAAGTGACAAATTGAGCATTTTAGTTTTATGCAAATAGATAGAATACTGtgaagcgacaaatccaaatccaaaccCAAATGACTGGGTAAATTCCTCAGATGCGGGTTGTCTGATGTTCCCCAGTTCTACACTCCCAGCTTTTAGGTCCtacttacatttattttctataaaattaGCTTTCAATGAAACTCAGATTAGATTAGGCTCAGATTAAAGAAACCAGGAAAGTTATGAACACAATATTTCGTTCAGAGATAAAACTGAACAATAGCTAGGAGTCTTTCCATTTTCAAACAACTGCAAACAAAAATTGCAAACCAGCAAAGCCAACATGGTGATAAATTCTGCCTATAGTTTAAAATGTTGGACAGCACAACAGTAGCTCCTACTATATAATATCACAAATGAAAACAGTAGCTGCTTAGTACAGTTTTAGAGGCAAACTGGACCAACATCAGCAACTTTCAATTTGTCATGAATCCAGGGTTAAGAGGCTACAGCTACAAGCACTGTGTTACTTATTTTCCAATACTTATTTTCCAATTCCAAACGTTATTATAATTGAATCCGTTTTTATGAATTGCATTGCCGGTGTAATGTCATTCAAGCGTTATCATTAAATTAAGCAACTCGCACAGCACTCTTTAATTGTGGCTGTCTCCTGAGCTAGGTTTGACTAGAGGTTTTGGCTCACTAATGACTCTAATGACTCGACAATTGAGGAGCCAAATTGTGTAAAATGGAGATAAATATCCAACAAAGGAGACTTGTCAGTGTTTGCAGTCTTATGCTGGAACAGTCACTTTCTTCTCTAGATTTTATCTTATTCAGTGTTTACTATGTCCTGCTAATATAATATGaagatttacattttcattacatacatataaaaactTGTTATTTAAGATAGctctactgttttttttgtaaatagagTCACTGTTTACACTTGTGCACAATGCATGGCTTTAATCTGATGTTTATATCACATGTTGTAGCATGAAAAGCATTATGGCTTTTAATGATGTCAAGACTTGGGTTTAACTGtgacttaaaatattaaaaaaaaaaaa
>XM_026930614.2
GCGAGGCAAGCGTGCTAACCACTAGGACACCGTGTCCTCTCGTGCGTCAATCCCACACAATGAAAAGATCATTTTTGTTTGCTTAACCATAACGCTGGGCAGGTGCAGGGGCTGGCTCGCTGTCGGAAAGCAGCAGGCTGAGCACTTCAGCACTATTTTCCTTCCTCCAGGGCGGAACTGTAGCGAAAAAACCTTTATATGTAACTGTATAGCGCCTTTTATACAATTTATAGTTTAGAGGCTAAACAGTAGATATTTGGTTTCCGTGACTTTAAGTGTGAGATGTGTAACGgtaatgaaaacatgaaagTGACTGACCATGAACCCCGCCTAGTCTGTTCAGGACGTTTTCGACACTGTTTGGTTCATATTCCTGAGTAAGCTGATCctgtaaaacactgaaacacgAATATTTCGAGAACATTACCAAGAGCTGCTCATGAATGTAGCTCAGGGAGGTTTAATACAACCTCGGAGGAACCGGAGCTAAGCGCCGCTAGCCGCTCGAGTCGTGTGAGGATTTGTCAAAcgctcatttatttatgtttacacaAATATATCTGCTACAGGATGGAGGACGGCTTGGCGTCAGAAGACGACATCTGTGATGCTGCACTCGGAGAAGGTGTTTCACAATGCTGCAAAACGGAATGACACAGGAAAGATGCTGGAGCTTATTAGGAAGGGGGTGGACatcaaagttaaaaataaaGCAGACAGGAAGGCACTGCACTGGGCTGCAGGTGCAGGTAGTGAAGATGCTCTGCGTCTGCTGCTGGAGCACGACACTGAGCTGGATGATGCAGACAGTTTTGGCATGAGTGCACTGCTGCTGGCAGCGTGGTTCGGTCACCTTAAAATATTGCAGATCCTTGTCTCATCTGGTGCCAAACTCAACTGTGAAAACAAAAATGGGCTTAATCTTCTGCACTGTGCTGCCCAGCGAGGTCATATTCGTATTCTGGAGTACATCATGGAGGATCTGGAAGATGTACGACTTGACAGAGTTGACAAGTCAGGTAAGACAGCATTTCACCTGGCAGCAGAACATGGACAGTTGGAGGTGATGGAGTATCTTATTGGCATGGGCTGCGCTCACGACCTCAAGGACAAGGAGGAGAACACTGCACTCCATCTGGCAGCGAAACACGGCCATGCAGAGGTTCTCCAGAAGATTCTGGAAACAGGGGAGAACATCAATGAGAGGAATATTGATGGTCTGACCGCTTTACACTTGTCTGTGGATGGAGGGCATTATGACTGTGTCAGGCTGCTGCTTGAGGCTCACTGCAACATCAACGTACTcacaaatAGGAACATGACGGCTCTTCACTTTGCAGTCCAGCATGGATCTGAAAGAGAGGTCAGGCTGCTTGTAGAAGCTGGAGTAAGTGTGGACTCAGTGGACATTAACCATACCACCGCACTACACTTGGCAGTGTTCAACAACTACACAGAGATTGTTAAAATACTCATTGATGCAGAATGTGACCTAGATATACTTGATGAGCGACATCAAACAGCTCTGCACATAGCAGCAGAACACGGGCGCCAAAATATAGCTGAACTGATCCTCATTGCTGGGGTTAACCTCAAACTTCTCGACAAGCAGGGAAAGACATCACTGGACATTGCAGCCAGAGGCAATCATGTGAACGTGGTCGACATGATTATCAGAGCAGATAGATTTTATAAATGGGAACAGGACAATATGAGCTCCGCTGGATCGTTAGTGGGAAGAAATTTAAACTTCAAACAAGATCATCAGCAGGAGACACAGCATATTCGCTCCATCTTATGGAAGTTAGCCACCAAACACCTGAAAGCTGGGGAGTGGAAGACACTGGCGCAGCACTGGCACTTCACAGACGCGCACATCCGAGCCATAGAACATGAGTGGACAGGTACTAAAAGCTATAAGGACCATGGACATCGCATGCTGCTGATCTGGCTGCATGGTGTGTTGATTGCCAGAGAAAACCCCATTAAAGGCTTGTACGAAGGGCTGATGGGAATCTCAAGGATGGATCTGGCAGAGAGTACGCGACAGCAGGCCAATGCAGACCCCAACACTCCTAAGAAGTGCACAACAATGTGAAACAGTGTTGTCTTGAAACACGCTGAAGAAATTATGTTTACAGCAAATAATACAAGATGAAACACAGACCAGAGCTTAGTATGCAATAGAATATGAACCCAGTTTTCCTCAACAACACACTGATTCAGTGAGTTTTGAAGGGCTACTACAGTACCATCTGTTGATTCTTGCAACAATGAAAAGTGACAAATTGAGCATTTTAGTTTTATGCAAATAGATAGAATACTGtgaagcgacaaatccaaatccaaaccCAAATGACTGGGTAAATTCCTCAGATGCGGGTTGTCTGATGTTCCCCAGTTCTACACTCCCAGCTTTTAGGTCCtacttacatttattttctataaaattaGCTTTCAATGAAACTCAGATTAGATTAGGCTCAGATTAAAGAAACCAGGAAAGTTATGAACACAATATTTCGTTCAGAGATAAAACTGAACAATAGCTAGGAGTCTTTCCATTTTCAAACAACTGCAAACAAAAATTGCAAACCAGCAAAGCCAACATGGTGATAAATTCTGCCTATAGTTTAAAATGTTGGACAGCACAACAGTAGCTCCTACTATATAATATCACAAATGAAAACAGTAGCTGCTTAGTACAGTTTTAGAGGCAAACTGGACCAACATCAGCAACTTTCAATTTGTCATGAATCCAGGGTTAAGAGGCTACAGCTACAAGCACTGTGTTACTTATTTTCCAATACTTATTTTCCAATTCCAAACGTTATTATAATTGAATCCGTTTTTATGAATTGCATTGCCGGTGTAATGTCATTCAAGCGTTATCATTAAATTAAGCAACTCGCACAGCACTCTTTAATTGTGGCTGTCTCCTGAGCTAGGTTTGACTAGAGGTTTTGGCTCACTAATGACTCTAATGACTCGACAATTGAGGAGCCAAATTGTGTAAAATGGAGATAAATATCCAACAAAGGAGACTTGTCAGTGTTTGCAGTCTTATGCTGGAACAGTCACTTTCTTCTCTAGATTTTATCTTATTCAGTGTTTACTATGTCCTGCTAATATAATATGaagatttacattttcattacatacatataaaaactTGTTATTTAAGATAGctctactgttttttttgtaaatagagTCACTGTTTACACTTGTGCACAATGCATGGCTTTAATCTGATGTTTATATCACATGTTGTAGCATGAAAAGCATTATGGCTTTTAATGATGTCAAGACTTGGGTTTAACTGtgacttaaaatattaaaaaaaaaaaa

Function

symbol description
ankdd1a Predicted to act upstream of or within signal transduction. Orthologous to human ANKDD1A (ankyrin repeat and death domain containing 1A).

NR:

description
PREDICTED: ankyrin repeat and death domain-containing protein 1A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026930613.2 False 3347 mRNA 0.43 15 8572475 8589352
XM_026930614.2 True 3351 mRNA 0.43 15 8572475 8589352

Neighbor

gene id symbol gene type direction distance location
clpxa clpx,clpxa,LOC107733949,LOC107737000,LOC107594724,LOC107600713 coding downstream 7567 8550368 ~ 8564908 (-)
pdcd7 pdcd7 coding downstream 22864 8544942 ~ 8549611 (-)
ubap1lb ubap1l coding downstream 28500 8534968 ~ 8543975 (-)
rasl12 rasl12,LOC107600716,LOC107737003,LOC107685213 coding downstream 43032 8522608 ~ 8529443 (-)
abhd2a abhd2a,LOC108270704,LOC108428500,LOC107733946,LOC107685211,LOC107662289,LOC107737001 coding downstream 64145 8491252 ~ 8508330 (-)
plekho2 plekho2 coding upstream 6828 8596180 ~ 8612306 (-)
lrrk1 lrrk1,LOC106593346,LOC106562602 coding upstream 218235 8807587 ~ 8924385 (-)
trnae-uuc_3 NA coding upstream 301275 8890627 ~ 8890698 (-)
aldh1a3 aldh1a3,LOC107692006,LOC107742307,LOC107553814,LOC106562593,LOC107755645,LOC107662254 coding upstream 337460 8926812 ~ 8950809 (-)
mesd mesdc2,LOC107591313,LOC107737020,LOC107693043,LOC107553745,LOC107709495 coding upstream 1169300 9758652 ~ 9768100 (-)
G178208 NA non-coding downstream 50390 8521801 ~ 8522085 (-)
G178057 NA non-coding downstream 248311 8323619 ~ 8324164 (-)
LOC113536653 NA non-coding downstream 297115 8271107 ~ 8275360 (-)
G177807 NA non-coding downstream 645417 7926293 ~ 7927058 (-)
G177733 NA non-coding downstream 821669 7728913 ~ 7750806 (-)
G178227 NA non-coding upstream 3834 8593186 ~ 8593405 (-)
G178398 NA non-coding upstream 121825 8711177 ~ 8712118 (-)
G178501 NA non-coding upstream 414292 9003644 ~ 9003852 (-)
G178673 NA non-coding upstream 597719 9187071 ~ 9189914 (-)
G178679 NA non-coding upstream 608248 9197600 ~ 9197805 (-)
trnar-acg_8 NA other downstream 324713 8247690 ~ 8247762 (-)
trnar-acg_7 NA other downstream 325700 8246703 ~ 8246775 (-)
trnar-ucg_7 NA other downstream 327754 8244649 ~ 8244721 (-)
igf1rb LOC108271091 other downstream 808045 7675916 ~ 7764430 (-)
si:ch1073-365p7.2 NA other downstream 983660 7580434 ~ 7588815 (-)
asb7 asb7,LOC107755647,LOC107662256,LOC107742335 other upstream 393830 8983182 ~ 8995120 (-)
mthfs mthfs,LOC102796869 other upstream 731614 9320966 ~ 9336186 (-)
LOC113536412 NA other upstream 798139 9387491 ~ 9407218 (-)
G178942 NA other upstream 933064 9522416 ~ 9523330 (-)
G179035 NA other upstream 1224540 9813892 ~ 9815225 (-)

Expression


Co-expression Network