ogal (LOC108270888,LOC108412751)


Basic Information

Item Value
gene id ogal
gene name LOC108270888,LOC108412751
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 7180208 ~ 7190834 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026930726.2
GTAGGTGTAAATACAAAGTGCAACGAGGAACTGGGCAGATTATAAAGGCAGAGGAGTGCATTATAAACAGCTGGGATGAGCACGGTCAGTCTTCTGTTGTCGTGTCAGTACGCCTAGTTTCGATTTCTAATGCATTAAATATAGAAGGGAAAGTGAGTTTTGAAGTCAGAAGTGCAGTATTTACTAATGCCATTCATTTGGAGTGTTTAAGACAAGCTGCCTCTGCATTGCTTAACACTGTTTGCTAAATTAATCTGCTGTCAAAGAAGGTTTGAGACACCGAGTTTGCACCAGTGTCAAAGATGAGCACCAGGCAGAGGATGTTCCTCAGTGGGGTTGTGGAAGGGTTTTATGGGCGCCCGTGGACTATGGAGCAAAGGAAGGAGCTGTTTAGGAGGGAGCAGAAATGGGGATTGAACACATACCTTTATGCCCCAAAAGATGACTACAAACACAGGATGTATTGGAGAGAGCTGTATACATCAGAGGAGTCAGAGCAACTGATCACACTCATTTCTGCTGCGAAAGAACATGACATTGAGTTCATCTACGCCATCTCACCCGGGCTGGATATTACCTTCTCAAACCCTAAAGAGGTTGCTGCTCTTAAGAGAAAGCTAAGTCAGGTGGTTGAGTTCGGCTGCAGATCCTTTGCCCTGCTTTTTGATGACATTGAGCCAGAAATGTGTGCTGCTGATAAGGAGGCCTTTAGCTCCTTTGCTCATGCACAGGTGTCCATCACCAATCAGGTGTATCAGCACCTGCAGGAGCCCCAGACCTTTCTCTTCTGCCCAACAGATTACTGTGCTGCATTCTGTACCCCTAATGTGAGACAGTcttcatatttacacactgtCGGAGAGAAGCTCCTCCATGGGATTGATATTCTCTGGACTGGGCCAAAAGTGGTGTCCAAGGACATTTCTGTGGAGTCAATTGAGGAAGTGTCCAGTGTTCTTAGAAGGCCACCAGTGATTTGGGACAACATCCATGCGAATGACTACGACCCACAGCGGCTGTTCATGGGACCCTTCAAGAACCGGCCCACAGAACTCATTCCCAAACTCCGAGGAGTACTCACCAACCCCAACTGTGAATTTGAGCCCAACTTCGTGGCTATTCATACACTAGCCACTTGGTGCAAATCTAACACGGGACAGAAAGATGTTGCTATGGATGGCGAGGATCAGGGGTCTGACTACAACCCCAAGGAGGCTTTGCGGCTTGCCCTCACTGATTGGCTGGTTGAGTTTGGTGTGGCCGATCAACCTGATGtgtccCGCACGGGCAGTGGTCGTGCTAAGAAAGAGCCGTCCGATGAGGAGCCCATGCAGACGGATGAGTATGTGCCGGGGCCCAGAGAGAACCCGCTGTACACGGCTGAGCCACTCACCCTGGAGGACCTAACGCTGCTCGCTGAGCTTTTCTACCTGCCCTATGAATATGGTCCCACAGCCCTCACCATGCTGCAAGAGCTGCAGTGGCTAAGAGGCAACAGTGACGCTGCCACGTTTGGTCCTGTGGTAGCCGAAAACAACAAGgCCAAAGAATGGCAAGAGAGAGCTGAGCACTTTGAAGACTTGTGTGCTGCGGTTGTCCGGATGTTTAACAGGTTGTCGAACGCACCCAACAGAACTATTCTGTACGACCTGTACAACTACATCTGTGATATAAAGAGTGGTGTGTCCTTAGCCAGGGCATTCGTCAACAGTTTGGGTGGTCGTAATCCCCCTCCCTCTCAAGTTATAAATGATGACCCGGAGCCATGGGGCTTCAGAGGTGGACTTTCTGGAGAGTTCCAGAGGATGCTTCCATGCCACGGGAACAGAGATCTGTTTCGTAGCCCTCCTGCCACTAGAGTGTACACTATTCGACCGTGTACCCCCAAAGATAAGTCTGAAGTTTTAAGATTATCCAAGGAGATGCAGAGTGAGACACTACAGCAAACTGCATTACTTGGTGAAAGGCTGGTGGATGGTCAGATTGCTCCATCTAAACACTGTGATCTGGTGCTGGAGGACGAGGTCGGCATCTGTGGTTTCGCTTTAGCCCTCACTGATGCAAAGACAGCCATCACCACATCCCAGTATCCAGAAACGATGCTGAGAGATTTCCCCTCTCTCATGATTATTCAAATCCACCCAAGAGTACCAGATCCCAACACTGCCAAGCGCCTGATTGGCAACATGCTCTCTTTACTGCAAGAAGCTGGCTCAACTGGTGTTTTTTGCGAGTTCAGATCTAATGACAGAAGAATGTTGGACTTTCTCAGGACTCTGGGCCTGCTCCATGTGCTTACAGTGGAAGGACTACAAACAGGCCTGGTCGTCATGGGAACAAAGCTGTGAATAATGATCTGTGTTTTACAGATAGTAAAGATGTTGATTTAAGCCCACATAGTGCTTTTATTGTTAAACAataagaaatgacaaaaataaaagttttaactTGACATGAACAGTGCAAATATGTTTCTAAACTTCATATGGGGTCAAATGATGTTTAGTATTTCTGTTACATCTTCATGCGATCAGAACTTTGATTGGAAGGAAATGGGCAATTTttttactacacacactaagATACCCTCATGAGGAAAAAGTTCTATTGCGTTATTGCTAAGTGATAAAACTATATCACttcaaatgacattttcaacatttatttagtctttttattttcgTTGGTATATTAGGATATGGGAACACCATACAACAGTGGAAATATGCCTGTTAGATATTTAATTGTCACTGTTGAAACAGCGGTATTGGTATTACATTCGGAGTATTTAACTCCTAGCAATCAgggtttttgcatttttcttttcttaaatggGATTTTCTACTTTCAAACTGGTCTATGCTTActttctttcaaaataaatcCCTCCCTCTCATTGAAATACAAGTTATATTTTAACTTGATGTAGTTAAAATAGAGGTAGAAATTTACCCATCATTTGAAAATTCCTCCAAGCACATACCTGTCTCCTGTTCTGACTCGTCCTCACTTCCTGCATTATGGTCTAACTCAACCTCACTGTTTTGTATAGGAATAGCCAGTGCCATCCTCTTCATATCCTGGCCTTAGAACATTTCCATGTTcgaaacaaaaacatgtaagCCATTATTATGAAAGCTGCATGAAATATAAgtgaaa
>XM_026930727.2
GACAGGTTGGGCGCATGCGCAGTAGGTGTAAATACAAAGTGCAACGAGGAACTGGGCAGATTATAAAGGCAGAGGAGTGCATTATAAACAGCTGGGATGAGCACGGTTTGAGACACCGAGTTTGCACCAGTGTCAAAGATGAGCACCAGGCAGAGGATGTTCCTCAGTGGGGTTGTGGAAGGGTTTTATGGGCGCCCGTGGACTATGGAGCAAAGGAAGGAGCTGTTTAGGAGGGAGCAGAAATGGGGATTGAACACATACCTTTATGCCCCAAAAGATGACTACAAACACAGGATGTATTGGAGAGAGCTGTATACATCAGAGGAGTCAGAGCAACTGATCACACTCATTTCTGCTGCGAAAGAACATGACATTGAGTTCATCTACGCCATCTCACCCGGGCTGGATATTACCTTCTCAAACCCTAAAGAGGTTGCTGCTCTTAAGAGAAAGCTAAGTCAGGTGGTTGAGTTCGGCTGCAGATCCTTTGCCCTGCTTTTTGATGACATTGAGCCAGAAATGTGTGCTGCTGATAAGGAGGCCTTTAGCTCCTTTGCTCATGCACAGGTGTCCATCACCAATCAGGTGTATCAGCACCTGCAGGAGCCCCAGACCTTTCTCTTCTGCCCAACAGATTACTGTGCTGCATTCTGTACCCCTAATGTGAGACAGTcttcatatttacacactgtCGGAGAGAAGCTCCTCCATGGGATTGATATTCTCTGGACTGGGCCAAAAGTGGTGTCCAAGGACATTTCTGTGGAGTCAATTGAGGAAGTGTCCAGTGTTCTTAGAAGGCCACCAGTGATTTGGGACAACATCCATGCGAATGACTACGACCCACAGCGGCTGTTCATGGGACCCTTCAAGAACCGGCCCACAGAACTCATTCCCAAACTCCGAGGAGTACTCACCAACCCCAACTGTGAATTTGAGCCCAACTTCGTGGCTATTCATACACTAGCCACTTGGTGCAAATCTAACACGGGACAGAAAGATGTTGCTATGGATGGCGAGGATCAGGGGTCTGACTACAACCCCAAGGAGGCTTTGCGGCTTGCCCTCACTGATTGGCTGGTTGAGTTTGGTGTGGCCGATCAACCTGATGtgtccCGCACGGGCAGTGGTCGTGCTAAGAAAGAGCCGTCCGATGAGGAGCCCATGCAGACGGATGAGTATGTGCCGGGGCCCAGAGAGAACCCGCTGTACACGGCTGAGCCACTCACCCTGGAGGACCTAACGCTGCTCGCTGAGCTTTTCTACCTGCCCTATGAATATGGTCCCACAGCCCTCACCATGCTGCAAGAGCTGCAGTGGCTAAGAGGCAACAGTGACGCTGCCACGTTTGGTCCTGTGGTAGCCGAAAACAACAAGgCCAAAGAATGGCAAGAGAGAGCTGAGCACTTTGAAGACTTGTGTGCTGCGGTTGTCCGGATGTTTAACAGGTTGTCGAACGCACCCAACAGAACTATTCTGTACGACCTGTACAACTACATCTGTGATATAAAGAGTGGTGTGTCCTTAGCCAGGGCATTCGTCAACAGTTTGGGTGGTCGTAATCCCCCTCCCTCTCAAGTTATAAATGATGACCCGGAGCCATGGGGCTTCAGAGGTGGACTTTCTGGAGAGTTCCAGAGGATGCTTCCATGCCACGGGAACAGAGATCTGTTTCGTAGCCCTCCTGCCACTAGAGTGTACACTATTCGACCGTGTACCCCCAAAGATAAGTCTGAAGTTTTAAGATTATCCAAGGAGATGCAGAGTGAGACACTACAGCAAACTGCATTACTTGGTGAAAGGCTGGTGGATGGTCAGATTGCTCCATCTAAACACTGTGATCTGGTGCTGGAGGACGAGGTCGGCATCTGTGGTTTCGCTTTAGCCCTCACTGATGCAAAGACAGCCATCACCACATCCCAGTATCCAGAAACGATGCTGAGAGATTTCCCCTCTCTCATGATTATTCAAATCCACCCAAGAGTACCAGATCCCAACACTGCCAAGCGCCTGATTGGCAACATGCTCTCTTTACTGCAAGAAGCTGGCTCAACTGGTGTTTTTTGCGAGTTCAGATCTAATGACAGAAGAATGTTGGACTTTCTCAGGACTCTGGGCCTGCTCCATGTGCTTACAGTGGAAGGACTACAAACAGGCCTGGTCGTCATGGGAACAAAGCTGTGAATAATGATCTGTGTTTTACAGATAGTAAAGATGTTGATTTAAGCCCACATAGTGCTTTTATTGTTAAACAataagaaatgacaaaaataaaagttttaactTGACATGAACAGTGCAAATATGTTTCTAAACTTCATATGGGGTCAAATGATGTTTAGTATTTCTGTTACATCTTCATGCGATCAGAACTTTGATTGGAAGGAAATGGGCAATTTttttactacacacactaagATACCCTCATGAGGAAAAAGTTCTATTGCGTTATTGCTAAGTGATAAAACTATATCACttcaaatgacattttcaacatttatttagtctttttattttcgTTGGTATATTAGGATATGGGAACACCATACAACAGTGGAAATATGCCTGTTAGATATTTAATTGTCACTGTTGAAACAGCGGTATTGGTATTACATTCGGAGTATTTAACTCCTAGCAATCAgggtttttgcatttttcttttcttaaatggGATTTTCTACTTTCAAACTGGTCTATGCTTActttctttcaaaataaatcCCTCCCTCTCATTGAAATACAAGTTATATTTTAACTTGATGTAGTTAAAATAGAGGTAGAAATTTACCCATCATTTGAAAATTCCTCCAAGCACATACCTGTCTCCTGTTCTGACTCGTCCTCACTTCCTGCATTATGGTCTAACTCAACCTCACTGTTTTGTATAGGAATAGCCAGTGCCATCCTCTTCATATCCTGGCCTTAGAACATTTCCATGTTcgaaacaaaaacatgtaagCCATTATTATGAAAGCTGCATGAAATATAAgtgaaa
>XM_034308948.1
GGGCGCATGCGCAGTAGGTGTAAATACAAAGTGCAACGAGGAACTGGGCAGATTATAAAGGCAGAGGAGTGCATTATAAACAGCTGGGATGAGCACGAAGGTTTGAGACACCGAGTTTGCACCAGTGTCAAAGATGAGCACCAGGCAGAGGATGTTCCTCAGTGGGGTTGTGGAAGGGTTTTATGGGCGCCCGTGGACTATGGAGCAAAGGAAGGAGCTGTTTAGGAGGGAGCAGAAATGGGGATTGAACACATACCTTTATGCCCCAAAAGATGACTACAAACACAGGATGTATTGGAGAGAGCTGTATACATCAGAGGAGTCAGAGCAACTGATCACACTCATTTCTGCTGCGAAAGAACATGACATTGAGTTCATCTACGCCATCTCACCCGGGCTGGATATTACCTTCTCAAACCCTAAAGAGGTTGCTGCTCTTAAGAGAAAGCTAAGTCAGGTGGTTGAGTTCGGCTGCAGATCCTTTGCCCTGCTTTTTGATGACATTGAGCCAGAAATGTGTGCTGCTGATAAGGAGGCCTTTAGCTCCTTTGCTCATGCACAGGTGTCCATCACCAATCAGGTGTATCAGCACCTGCAGGAGCCCCAGACCTTTCTCTTCTGCCCAACAGATTACTGTGCTGCATTCTGTACCCCTAATGTGAGACAGTcttcatatttacacactgtCGGAGAGAAGCTCCTCCATGGGATTGATATTCTCTGGACTGGGCCAAAAGTGGTGTCCAAGGACATTTCTGTGGAGTCAATTGAGGAAGTGTCCAGTGTTCTTAGAAGGCCACCAGTGATTTGGGACAACATCCATGCGAATGACTACGACCCACAGCGGCTGTTCATGGGACCCTTCAAGAACCGGCCCACAGAACTCATTCCCAAACTCCGAGGAGTACTCACCAACCCCAACTGTGAATTTGAGCCCAACTTCGTGGCTATTCATACACTAGCCACTTGGTGCAAATCTAACACGGGACAGAAAGATGTTGCTATGGATGGCGAGGATCAGGGGTCTGACTACAACCCCAAGGAGGCTTTGCGGCTTGCCCTCACTGATTGGCTGGTTGAGTTTGGTGTGGCCGATCAACCTGATGtgtccCGCACGGGCAGTGGTCGTGCTAAGAAAGAGCCGTCCGATGAGGAGCCCATGCAGACGGATGAGTATGTGCCGGGGCCCAGAGAGAACCCGCTGTACACGGCTGAGCCACTCACCCTGGAGGACCTAACGCTGCTCGCTGAGCTTTTCTACCTGCCCTATGAATATGGTCCCACAGCCCTCACCATGCTGCAAGAGCTGCAGTGGCTAAGAGGCAACAGTGACGCTGCCACGTTTGGTCCTGTGGTAGCCGAAAACAACAAGgCCAAAGAATGGCAAGAGAGAGCTGAGCACTTTGAAGACTTGTGTGCTGCGGTTGTCCGGATGTTTAACAGGTTGTCGAACGCACCCAACAGAACTATTCTGTACGACCTGTACAACTACATCTGTGATATAAAGAGTGGTGTGTCCTTAGCCAGGGCATTCGTCAACAGTTTGGGTGGTCGTAATCCCCCTCCCTCTCAAGTTATAAATGATGACCCGGAGCCATGGGGCTTCAGAGGTGGACTTTCTGGAGAGTTCCAGAGGATGCTTCCATGCCACGGGAACAGAGATCTGTTTCGTAGCCCTCCTGCCACTAGAGTGTACACTATTCGACCGTGTACCCCCAAAGATAAGTCTGAAGTTTTAAGATTATCCAAGGAGATGCAGAGTGAGACACTACAGCAAACTGCATTACTTGGTGAAAGGCTGGTGGATGGTCAGATTGCTCCATCTAAACACTGTGATCTGGTGCTGGAGGACGAGGTCGGCATCTGTGGTTTCGCTTTAGCCCTCACTGATGCAAAGACAGCCATCACCACATCCCAGTATCCAGAAACGATGCTGAGAGATTTCCCCTCTCTCATGATTATTCAAATCCACCCAAGAGTACCAGATCCCAACACTGCCAAGCGCCTGATTGGCAACATGCTCTCTTTACTGCAAGAAGCTGGCTCAACTGGTGTTTTTTGCGAGTTCAGATCTAATGACAGAAGAATGTTGGACTTTCTCAGGACTCTGGGCCTGCTCCATGTGCTTACAGTGGAAGGACTACAAACAGGCCTGGTCGTCATGGGAACAAAGCTGTGAATAATGATCTGTGTTTTACAGATAGTAAAGATGTTGATTTAAGCCCACATAGTGCTTTTATTGTTAAACAataagaaatgacaaaaataaaagttttaactTGACATGAACAGTGCAAATATGTTTCTAAACTTCATATGGGGTCAAATGATGTTTAGTATTTCTGTTACATCTTCATGCGATCAGAACTTTGATTGGAAGGAAATGGGCAATTTttttactacacacactaagATACCCTCATGAGGAAAAAGTTCTATTGCGTTATTGCTAAGTGATAAAACTATATCACttcaaatgacattttcaacatttatttagtctttttattttcgTTGGTATATTAGGATATGGGAACACCATACAACAGTGGAAATATGCCTGTTAGATATTTAATTGTCACTGTTGAAACAGCGGTATTGGTATTACATTCGGAGTATTTAACTCCTAGCAATCAgggtttttgcatttttcttttcttaaatggGATTTTCTACTTTCAAACTGGTCTATGCTTActttctttcaaaataaatcCCTCCCTCTCATTGAAATACAAGTTATATTTTAACTTGATGTAGTTAAAATAGAGGTAGAAATTTACCCATCATTTGAAAATTCCTCCAAGCACATACCTGTCTCCTGTTCTGACTCGTCCTCACTTCCTGCATTATGGTCTAACTCAACCTCACTGTTTTGTATAGGAATAGCCAGTGCCATCCTCTTCATATCCTGGCCTTAGAACATTTCCATGTTcgaaacaaaaacatgtaagCCATTATTATGAAAGCTGCATGAAATATAAgtgaaa

Function

NR:

description
protein O-GlcNAcase-like

GO: NA

KEGG:

id description
K01197 hya; hyaluronoglucosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026930726.2 True 3159 mRNA 0.45 16 7180208 7190813
XM_026930727.2 False 2995 mRNA 0.46 17 7180208 7190834
XM_034308948.1 False 2990 mRNA 0.46 17 7180208 7190826

Neighbor

gene id symbol gene type direction distance location
tk1 tk1,LOC107713239,LOC107726782 coding downstream 25499 7150679 ~ 7154709 (-)
tmc6b tmc6 coding downstream 71999 7079500 ~ 7108209 (-)
aspscr1 aspscr1 coding downstream 124284 7018805 ~ 7055924 (-)
LOC113536680 LOC108270653 coding downstream 168693 7009298 ~ 7011515 (-)
pycr1b pycr1,pycr1b,LOC107572052,LOC107564555,LOC108443889,LOC108236293 coding downstream 184640 6988303 ~ 6995568 (-)
si:dkey-93h22.8 LOC108270890 coding upstream 1421 7192255 ~ 7202864 (-)
cfap410 c10h21orf2,cunh21orf2,LOC107713232,LOC107564578 coding upstream 57514 7248348 ~ 7252593 (-)
strn strn,LOC108271087,LOC108430145,LOC107702041,LOC107701064 coding upstream 105873 7296707 ~ 7354330 (-)
irf2bp2b irf2bp2 coding upstream 243485 7434319 ~ 7437490 (-)
rbm34 rbm34 coding upstream 301667 7492501 ~ 7500900 (-)
LOC117598441 NA non-coding downstream 22587 7156228 ~ 7157621 (-)
G177404 NA non-coding downstream 41304 7137629 ~ 7138904 (-)
G177374 notum non-coding downstream 120658 7058532 ~ 7059550 (-)
G177097 NA non-coding downstream 441600 6738321 ~ 6738608 (-)
LOC117598400 NA non-coding downstream 590912 6579004 ~ 6589296 (-)
G177448 NA non-coding upstream 76727 7267561 ~ 7271271 (-)
G177455 NA non-coding upstream 99051 7289885 ~ 7290092 (-)
G177459 NA non-coding upstream 102083 7292917 ~ 7293170 (-)
G177469 NA non-coding upstream 184193 7375027 ~ 7375235 (-)
G177491 NA non-coding upstream 223133 7413967 ~ 7414185 (-)
LOC113536608 LOC108270551 other downstream 318860 6856755 ~ 6861348 (-)
LOC113536561 srsf7,LOC107665899,LOC107693014 other downstream 1471904 5696380 ~ 5708304 (-)
trip4 trip4 other downstream 1983390 5139610 ~ 5196818 (-)
G176307 NA other downstream 2099313 5079817 ~ 5080895 (-)
lto1 oraov1 other downstream 2675879 4498946 ~ 4504329 (-)
si:dkey-56d12.4 LOC108270721 other upstream 289588 7480422 ~ 7484117 (-)
si:ch1073-365p7.2 NA other upstream 389600 7580434 ~ 7588815 (-)
igf1rb LOC108271091 other upstream 485082 7675916 ~ 7764430 (-)
trnar-ucg_7 NA other upstream 1053815 8244649 ~ 8244721 (-)
trnar-acg_7 NA other upstream 1055869 8246703 ~ 8246775 (-)

Expression


Co-expression Network