b3gnt7 (b3gnt7)


Basic Information

Item Value
gene id b3gnt7
gene name b3gnt7
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 11176097 ~ 11181854 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026930852.2
gaagggTCGCGTGCGGCGGCGGCAGCAGCAGCTCAGTGCCGGTGAGTGCAGCGGTGTTTCTGTGGGAGATGAACTGAGACCCAGCCGGAGACCATTCCGAGTCACTTTTAACCAAGATGTCAAACAAGTTTGAATTTATAAACTCTCTCATCATgTCGGCTCCCAGACATCGGTGGAGGATGTGCAAGACAGTAGCTCTGATCTTCGTCGTGGCTGTGCTGATGATCAGCGTGTTTCAGAGAGGACTCGTTGGCACCGGAGGGGACTTACAGATCGAAAGGAATGCACGCATGCAGAAGGAAACGATAACCTATTGGAAAGAAAAGCAGGACAAATTGGCTGAAACCAGACAAGAACCGGTGTATGAACGAGACTTAGCCAGAACATGGGACATCACGAGCGCGAACTGCAGCGCTAGCACAAATGTTTCCTCTATAGAAGGTTTCAGTGCTCTGGAGCAGAACTTTAAACAGTTTCTCCTCTACAGGCACTGCAGATATTTCCCCATGATCATGAACCACCCAGAGAAATGTTCTGGAGATGTACACCTCCTCATGGTGATAAAATCCATCATATCGCAGCACGACAGACGTGAAGTGATCCGGCAAACTTGGGGAAAGGAGCAGGTCGTAGACGGCAAGAAGATCAAGATGCTCTTCCTGTTGGGAACTTCCTCTAATGAAGAGGAGAAAGCGAACCACCAGAAGCTTCTGGAATACGAGGATTATATCTACGGTGACATCCTGCAGTGGGATTTCATGGATACATTCTTCAATCTCACATTAAAGGAGACCCACTTCCTGAAATGGTTCTCCACCTACTGCGGGAACGTGCGCTACATCTTCAAAGGGGATGACGATGTCTTTGTTAGCGTAATGAACATTCTGGAGTATCTGGAGAGCAGCAAGAACACGAAGGACCTGTTCGCCGGAGACGTCCTCTTCAAAGCGAAACCCATCCGAAAGAAACAGAACAAGTACTACATCCCACCTGCGCTGTATAACAAGACGCATTACCCGCCCTATGCTGGAGGCGGGGGGTTTTTGATGGACGGCCCGCTGGCACGACGGCTCTATTTGGCATCAGAAACGCTGGAGCTCTTTCCAATCGACGATGTGTTTCTTGGAATGTGTTTAGAGGTGCTCCAGGTGACACCTATAAAACACAACGCATTCAAAACTTTTGGCCTCTTGAAGGATAAAAAGAGCAAACTGAACAACGAGCCGTGTTTCTACAAGAGCATGATCGTGGTCCATAAACTCCTCCCTCAGGCGCTTCTGGACATGTGGAGGTTGGTCCACAGTGACCTCGTGTGCACGCTCAAACCCGGGCTGTTATGGGAAGCATCAAAAAATCTGAATCAACAGTTATAGCAATTTTATGGAATGTGAACAAGATTTGATGTAACCCCACCCCTTGTCTTTACCTTGTCTTGGTGtccaaatgaaatacaaaaggGACTTTGAAGGGAGGACGCTCTTTTCTAAACGGACCAACTTGGCCAATTCTTCTGCTCAAAAATAATGGCGCCCCCATAGACTCCTCTAGCTTGGAATGCAGTACGACTCATATCGGTCACTAGCAACTGAATGTGATAAACTTAACTTGCTTTTACAAGGAAGGACATTGGTTCTGATGCTGTAGTCTCACAACCATTTACCTAACAACAAGTTAGTGAACGATTAGTAGCTAGGctactatttatttttgctaacaGTCGCATCTGTATGTTATTAATTAGCGACACGTCTTTGTTTACATAAAGGTCAGCAAGTGTACAATTTTTAGGTGCACTCTGAATGACTATTTCTTTCAAAGTTCCTTCCTTTTGTTTGGCAAACTTAGTGTGCTGTTTGAAAGAACAAAGAACTTTCAACATGTTTAAAACAGCATTGCACGTCCTTCCTGGAGAAGGCACATTTGACACGAGTGTCATGAacgttaaaaaaagaaatagctgaagaattattttttaaactacacTATGGGGATAAGAGGGTATTGGGTGATTTattgtggtttattttttggGTATTACACTGATTTGTGCTGATTTGTGAATGTATTTAAAGTAGCATTAGATGTTCTAATGAAATAGAAGGGAACAAAAACATCTCTACCTCATCGTGGAGTTCTGAAGTCTGGATGAACTTTTTTAAtcaacagcagtgttttagttGTGATTTTAACATACCCTCATACACTTCCCCTTGATCAGTTCACGTGAGTTTTAGTTTTAGAGCGTAAAAAAGGGAGTTGCTGTGAGGTTTACTAGAGCGTTAAAGGGAGTTGCTGTTCTCTGCCTTGAGGAaaatcagagaagcaaccaagagaaCAAGAGTAACGCTCAAcctgatgctaccaccaccatgcttcaacTTGGTTGTAACATTACAGAATAGGGGCAATTTGAAGGAGCTGAATACTTCTAGAAGGTACTGTATATCAGAGCAATAcagttttttaaagtttattagtttttatttgtcCGGTTCTGCTCATGActgtgttagctagttagcactTCATGTATTTCATATAAGACTGTATTTTTGAAGAaactatacactacacattcTGCCCCATGTGATTTAAGTGCACACGGTTTGATGCCGACTTCCCATAAAAATGTGCACAAAGGTACTTTAAAAACAGTACTGAAATACAGGCTAGCATTTTCTAAGTAGCATTTAATAATTTTCAGAACTGTCTTTTCAAGTCTGTCATAGTCTCTTGTCCCACTCTCTGTCTGCGTTTTGTGATATTCACTGTTTATcagtgtaaaatatttgtaaatgtgtgtaaatgtgtgtctcAATTCACACACCTGAAACAGAAAAATGCCTAATGTGTAGTTAATACTGTGGAGAAGGTCAATACAAGTGTGTGAAGTTTATCTTTTATGTAAATTTGTTCAGTAACTGCTGTCCAGATCttttttctgtactttattTGTTCGCATTTGTGACTAAAACTACAGTTAGGGTACACACTCATGtcagaagtgtgtgatttgagacacagcagAAATATGATTAGTGATATTTTCCAGCTACACAGGGTAATATTCTGTTTTcatgtcactttacagcagaaaaaacCCAGTAAGATCAGACAGCCTGAGAATAGACATTGTACATTATActgtgaaatgaataaatactctggtacttaaattaaattaaattaaattaaagattgACTAGTTTTAAGGTTTAGGGTTTATGGtatttaatgtttcttttgttCCTGTTTTAAATTCTGACTTGTTGAAATCAGCAAGAATGTAGAGacaataattgtaaataaaggTTTATAAAGATAAAGA

Function

symbol description
b3gnt7 Predicted to enable UDP-glycosyltransferase activity. Predicted to be involved in poly-N-acetyllactosamine biosynthetic process. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi membrane. Is expressed in several structures, including Kupffer's vesicle; axis; hypochord; optic primordium; and optic vesicle. Orthologous to human B3GNT7 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7).

NR:

description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7

GO: NA

KEGG:

id description
K09664 B3GNT7; beta-1,3-N-acetylglucosaminyltransferase 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026930852.2 True 3328 mRNA 0.41 2 11176097 11181854

Neighbor

gene id symbol gene type direction distance location
LOC113536667 armc9 coding upstream 15871 11113644 ~ 11160226 (+)
LOC113536756 LOC108271257 coding upstream 502045 10650258 ~ 10674052 (+)
tctex1d2 tctex1d2 coding upstream 552933 10617812 ~ 10623164 (+)
rubcn rubcn coding upstream 596704 10565259 ~ 10579393 (+)
LOC113536420 NA coding upstream 612604 10555285 ~ 10563493 (+)
alpi.1 LOC108270517,LOC108410621,LOC105900923,LOC107698042,LOC107550664 coding downstream 179110 11360964 ~ 11379995 (+)
alpi.2 LOC108270538,LOC108410619 coding downstream 202952 11384806 ~ 11392946 (+)
ppp1r2 ppp1r2 coding downstream 213353 11395207 ~ 11402964 (+)
ncl ncl coding downstream 227214 11409068 ~ 11419817 (+)
LOC113536790 NA coding downstream 230206 11412060 ~ 11412127 (+)
G179685 NA non-coding upstream 12718 11163021 ~ 11163379 (+)
G179648 NA non-coding upstream 21334 11152149 ~ 11154763 (+)
G179647 NA non-coding upstream 23141 11152018 ~ 11152956 (+)
G179628 NA non-coding upstream 106280 11069589 ~ 11069817 (+)
G179572 NA non-coding upstream 312247 10863649 ~ 10863850 (+)
G179696 NA non-coding downstream 12982 11194836 ~ 11195687 (+)
G179754 NA non-coding downstream 219070 11400924 ~ 11401434 (+)
G179753 NA non-coding downstream 222505 11404359 ~ 11407414 (+)
G179773 NA non-coding downstream 289492 11471346 ~ 11473207 (+)
G179775 NA non-coding downstream 291714 11473568 ~ 11475147 (+)
G179643 NA other upstream 14500 11160346 ~ 11161597 (+)
G179632 NA other upstream 77286 11096153 ~ 11098811 (+)
LOC113536516 ephb3,LOC107687281,LOC107668659,LOC102790569,LOC107744192 other upstream 325174 10810670 ~ 10850923 (+)
LOC113536578 NA other upstream 2905347 8253421 ~ 8270750 (+)
trnar-ucg_8 NA other upstream 2928009 8248016 ~ 8248088 (+)
G179758 psmd1 other downstream 246759 11428613 ~ 11430897 (+)
G180121 NA other downstream 873104 12054958 ~ 12055749 (+)
timm13 timm13,LOC107731338,LOC106573564,LOC107593051 other downstream 1146198 12328052 ~ 12333681 (+)
cdc14ab cdc14a other downstream 1331034 12512888 ~ 12561781 (+)
LOC117598398 NA other downstream 1391303 12573157 ~ 12602064 (+)

Expression


Co-expression Network