LOC117595669 (pex11g)


Basic Information

Item Value
gene id LOC117595669
gene name pex11g
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 19527046 ~ 19531687 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034308528.1
aacatttctctgtaaaatatatactttcCACCGCGACAATAATGAGGTAATGCTAGTAAtattagttagttagctagctagctagctgtcccAGGAGCAGGCTGGTGTTTTTGCAGCTCTGTGAGCATAGAGATTAGTTATAATCATGGACAATTCATTTGAATCAGTAGTGAATTTGCTGGAGTCCTACAGAGGAAGAGATAAAGTGATAAGGACAGTATGTTATGGATCGCAGCTGGTTGGTGGCATCATTTCACAAAAAACGGCCAACTCCTCACAGCTCGGCAAGAGTCTCCTGCTCTTCTCAGCTCAGCTCAGTCACTGCCGGACAGTTCTGCGCCTGTTTGATGACCTTTCTATGGCTGCTTACTCGCGGAGCTACGGTCTCGGATCCACGGAGGAGGACAAGGTGCTGCGGTGCATGTCGGTGCTGATTAATGCTGCAGATCAGCTGTATTATCCGTGTGAACACATTGCCTGGGCAGCTGATGCAGAGCTCATTAAAGTCAAGTCTGACAAATGGTGGACACTGAGCACAGTTCTGTGGGGTGTGTCTTTACTTCTGGGCACTCTCAGATCGCTCAGAATAATCCGGAAATTAAAGAAGAAGGCGCAGAAGTGCAGAGAAGCAGGACAAGTGGATAGCAGggAAAACGCTGTTACCTCCACTGTTGAGATTCGAAAGCAGATTTGGGGAGAGTTTCTTAATATTCTTAGCAGCCTGGCGGATCTGAGCAATGCTATTCATTGGATGCCACCTGGATTTCTTTGGGCTGGTCACTTCCCTGATTGGCTGGTGGGACTAATGGGGACCGCCTCGTCCCTGCTTGGCATGCTGCACATGAGTTCCAGTGATTAAAGTGCCAGCGTCTGACATGATGAACTGTGGGGACctgaatgaatgtttttgtttgtttgtttgtttgtttgtttgtttgtttttgcttagAGACTACATATTTCCAATATTTCAGTTTCTTATTAGATTTTACATGGTGATGCAAGCTTCATGATTTCACATAATACACTATAAAAGGTACATGATCAGTTCTGATataatgtatacagtacataattatgtaatatataatcaAGAGACAGATTGTACAGTAAAAGAAATATAGCACTTTAGGTAAAGGATGTGCACTGAGAAAATTGatcaattacaataaaaaaaacaatacttcATACATGGATGACTGAAA

Function

symbol description
pex11g Predicted to be involved in peroxisome fission. Predicted to be located in membrane and peroxisome. Predicted to be integral component of peroxisomal membrane. Predicted to be active in peroxisomal membrane. Orthologous to human PEX11G (peroxisomal biogenesis factor 11 gamma).

GO:

id name namespace
GO:0016559 peroxisome fission biological_process
GO:0005779 integral component of peroxisomal membrane cellular_component

KEGG:

id description
K13353 PEX11C; peroxin-11C

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034308528.1 True 1205 mRNA 0.43 5 19527046 19531687

Neighbor

gene id symbol gene type direction distance location
si:ch73-40i7.2 LOC108271407 coding upstream 2049 19509033 ~ 19524997 (+)
slc35e1 slc35e1,LOC107750991,LOC107752163 coding upstream 21945 19498363 ~ 19505101 (+)
LOC113535100 med26 coding upstream 31145 19490432 ~ 19495901 (+)
crtc1b crtc1,LOC107747695 coding upstream 68872 19442164 ~ 19458174 (+)
klhl26 klhl26,LOC107680559,LOC107747058,LOC107597147 coding upstream 87865 19429911 ~ 19439181 (+)
zgc:172302 LOC108271263 coding downstream 24025 19555712 ~ 19584739 (+)
r3hdm4 r3hdm4,LOC107750993,LOC107592851,LOC107661084 coding downstream 55641 19587328 ~ 19597392 (+)
LOC113531697 kiss1r coding downstream 67576 19599263 ~ 19605614 (+)
arid3a arid3a coding downstream 75760 19607447 ~ 19638191 (+)
ctdspl3 LOC108270532,LOC108435930,LOC107597167,LOC107757917,LOC107685268 coding downstream 110538 19642225 ~ 19648916 (+)
G184503 NA non-coding upstream 64203 19461824 ~ 19462843 (+)
G184504 NA non-coding upstream 65356 19459818 ~ 19461690 (+)
G184340 NA non-coding upstream 445561 19081252 ~ 19081485 (+)
G184309 NA non-coding upstream 514434 19012407 ~ 19012612 (+)
G184167 NA non-coding upstream 632171 18891239 ~ 18894875 (+)
G184614 NA non-coding downstream 16976 19548663 ~ 19602639 (+)
G184617 gamt,LOC107747770,LOC107685360,LOC107597217,LOC107757934 non-coding downstream 129405 19661092 ~ 19664491 (+)
G184718 NA non-coding downstream 171948 19703635 ~ 19704250 (+)
G184823 NA non-coding downstream 277026 19808713 ~ 19809254 (+)
G184882 NA non-coding downstream 389784 19921471 ~ 19947483 (+)
smim7 smim7,LOC107568062,LOC107703137,LOC107658516 other upstream 39262 19486328 ~ 19487784 (+)
adgrl4 adgrl4,LOC102783218 other upstream 256785 19254931 ~ 19270261 (+)
LOC113526284 naaladl2 other upstream 1117989 18166622 ~ 18409057 (+)
G183549 NA other upstream 1730427 17795445 ~ 17796619 (+)
ect2 ect2,LOC107674529,LOC107718889 other upstream 1745232 17754176 ~ 17781814 (+)
si:ch73-40i7.5 apba3,si:ch73-40i7.5,LOC108271288,LOC107750992,LOC107592849,LOC107661085,LOC105938289,LOC107096970,LOC105910839,LOC106516779,LOC107550530,LOC102779936,LOC101467998 other downstream 394 19532081 ~ 19554969 (+)
rps15 rps15,abhd8,LOC107685215,LOC107578086 other downstream 163540 19695227 ~ 19700274 (+)
tax1bp3 tax1bp3,LOC107685157,LOC107747253,LOC107680510 other downstream 296299 19827986 ~ 19834414 (+)
LOC113534304 slc1a6,LOC108270573,LOC108437295,LOC107685347,LOC108271210,LOC105901002,LOC107747749,LOC107757933 other downstream 304458 19836145 ~ 19845238 (+)
ccl44 LOC108271213 other downstream 334111 19865798 ~ 19871463 (+)

Expression


Co-expression Network