npepps (npepps,LOC106587691,LOC107718863,LOC107674532)


Basic Information

Item Value
gene id npepps
gene name npepps,LOC106587691,LOC107718863,LOC107674532
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 21086917 ~ 21105876 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034308716.1
GAGCGCGCACGTACGCACTGGCCGCAATTTCGGTTGATTTGAAGTGAGAGGGGAAGACGACGGGAGGCAGTTAGCAGCAAATCCAGCTAGTTTATGTTGCTGTTTCTGAGCCGTCAggtttctctctcgctctcagtcGTACGACAGGTCATAGCAGGAGCTCGTATTGTGCACTCGAAGCCTGTTTCTTTGTCTGTCAGAGCAAGTGCTCGGTGTAGTCCGCTTTCTGCTGTCGCTCCCAGCCCAACTCGAGTCAGCATGCCTGAGAGGAGGCCCTTCGTGCGGCTGCCTACTGACGTTTACCCCGTTAACTATGCGCTGTGTCTCAAACCCGACCTGATTGACTTCACCTTCGAGGGCAAGCTGGAAGCCGAGGTGGAGgtTACACAAGGGACAAATCAAATTGTGATGAACTGTGCAGATATAGACATAATCACTGCATCGTTTGCACCAGAAGGAGGGGAAGAAATCAGCGCTACAGGATTTAACTATCAGAATGAGGATGAGAAAGTCACTTTGTCTTTCCCCAGTGCTCTTCAGAAAGGGTCTGGTGTGTTGAAGATTGACTTCGTTGGAGAGTTGAATGACAAAATGAAAGGTTTCTACAGAAGTAAATATACGACTCCGTCAGGAGAAATCCGCTATGCAGCTGTCACTCAGTTTGAGgccACGGATGCTCGCCGAGCTTTCCCTTGCTGGGACGAGCCAGCTATCAAAGCCACCTTTGACATCATCCTTATTGTCCCCAAGGACCGAGTAGCCTTGTCGAACATGAACGTCATCGATCGGAAGCCGTACCCGGAGGATGACAGTCTTGTGGAAGTGAAGTTCGCCACTACGCCCATCATGTCCACGTACCTGGTGGCGTTCGTCATCGGCGAGTATGATTTTGTGGAGAGCCAGTCGTCTGATGGCGTGACCGTCCGTGTGTACACGCCAGTGGGGAAAGCGGAGCAGGGGAAGTTTGCACTGGAGGTGGCTACTAAGACCTTACCTTTCTACAAAGACTATTTTAATGTTCCTTATCCTTTGCCTAAAATTGATCTAATAGCAATTGCTGATTTTGCTGCAGGTGCCATGGAAAATTGGGGCCTTGTTACTTACAGGGAGACTGCTCTACTGATTGACCCAAAGAATTCGTGTGCGTCCTCGCGTCAGTGGGTGGCCCTGGTGGTAGGGCATGAGCTGGCACACCAGTGGTTTGGGAATTTGGTTActatgGAATGGTGGACCCATCTGTGGCTTAATGAGGGCTTTGCGTCATGGATCGAGTACCTCTGTGTGGATCACTGTTTCCCTGAGTATGACATCTGGACGCAGTTTGTATCTGCTGACTACACGAGGGCTCTGGATCTGGATGCTCTTGATAACAGTCACCCAATTGAGGTTAATGTAGGACATCCTTCAGAAGTGGATGAAATCTTTGATGCCATATCCTACAGCAAAGGTGCTTCTGTTATTCGCATGCTGCACAATTACATAGGAGATGAGGATTTTAGAAAGGGAATGAACACTTATCTTTTGAAGTTTCAACACAAAAATGCATCCACAgagGACCTGTGGGACTGTCTAGAGCAGGCTAGTGGGAAGCCCATTGCTGCGGTGATGAGCTCTTGGACCAAACAGATGGGATTCCCCATTATTGTAGTGGACCAGGAGCAGcaagGAGACGATCGGGTGCTGAAGATATCTCAGAAGAAGTTCTGTGCTAGTGGACCACATAATGGTGAGGACTGCCCCAGCTGGATGGTCCCAATTAGCATCTGCACCAGTGAGGACCCCAGCTGCTCCAAGATAAAGGTTCTGCTGGATCAGCCTGAACTCACAGTCACCATCCCTAACCTGGGACCAGAAAAGTGGGTCAAGCTTAATCCAGGCACAGTAGGCTTCTACAGGGTCCAGTACAGCTCGGCCATGCTGGAGAGTTTGCTGCCAGGAATCCGAGATCTTACACTGCTCCCCGTAGATCGCCTGGGCCTGCAGAATGACCTTTTCTCCCTGtCTCGTGCAGGTATGATCAGCACGGTGGAGGTGCTAAAAGTGATGGAGGCGTTTGTGAATGAGCCGAACTACACAGTGTGGAGTGACCTGAGCTGTAACCTGGGTGTGCTCTCCTCTCTGCTCTCCCACACCGACTACCATGAGGAGATCCAGGAGTTCATCCGAGACCTCTTTACCCCCATCGGCCTAAAGCTGGGCTGGGACAGCAAACCTGGCGAGGGCCATTTGGATGCTCTGCTACGAGGGCTTGTGTTGGGAAAGCTGGGGAAAGCAGGACACAAGGCCACGCTGGAGGAGGCTCGCAGGAGATTTAAAGACCATGTGGAAGGCAAGCAGATCCTCTCTGCAGACCTCAGGAGTCCAgTTTATCTAACAGTTTTAAAACATGGCGATAGCTCAATGCTGGACACTATGCTGAAGCTCCATAAACAGGCTGACATGCAGGAGGAAAAGAATCGCATAGAGAGAGTTCTGGGAGCAATCTCGTCTCCAGACCTCATCCAGAGAGTGTTGACTTTCTCCCTTTCGgatgatGTTCGTCCGCAGGACACCGTGTCTGTGATTGGCGGCGTGGCCGGGAGCAGCAAGCATGGCCGCAAAGCAGCTTGGAAATTTGTCAGAGATAACTGGGAGGAGCTTCATAACCGCTACCAGGGCGGATTCCTCATATCTCGACTCATTAAGCTCACTGTTGATGGGTTTGCAATTGACAAAATGGCTGCAGAAGTAAAGAGTTTCTTCGAGACCCACCACGCGCCAGCGGCCGAGCGCACCGTGCAGCAGTGCTGCGAGAACATTCTCCTGAACGCGGCCTGGCTCAAGCGAGATGCCGATGACATCCATCAGTACCTGCTGCAGCGCAAAGCACCTCCAGTGTGACCCCTGAACTCTGACCCCAGCCTCTCCTGACCtgcttactcactcactcagatTTCCCAGCAAATCATCGCTGCCTCCGCCAGTCCGCCCCGCAGAGAGCGAGAGCATCCAGAAATTAAACAGGCTTTGTTTTTTCTATATTATGTGATGACGATTAAAGCGCTGTAGTTACATCTTGCGAATTATCCAAGAGAAATCGAAATCAAGACAGACGTGTGATGACGAATGTTGTACCCTGTTCTGCCTGCTGGAAACAATGCACATGCAAAGATGTAAGAAAATCGcagatgtgattttcttttcttgtttttttttctttcttttcttttttttttttttttttctgtttaagaTGGTAACGCATGCATTTGATTTTTACAATTAGCACTTATTCACTCAGACAGTACTCTGCCAGACATTTCACTATGGACCTCAACATGCATTTACACAGTAGTATGATAACTGTGAATTGATTTCGCTCTTCCGCCTATCTCTTTAAAAAGAGGCATGCTTGCAACGTTTGATATCAGTGCTTTGATATCAAtggtttatttcagtgtttatttttagacaTGTATGTTTTCTGTGCAAACAGTATTGTACTTCCTCTGCCGTCTCATCCATTACAATGGCTGTAGCCCCAGTTTTATGTAGAATTACCTTGAGACGTGGCTTGGCAGAATGGGGTTAAAGGTCATGGTGTGCTTGTAAAAAGGACTTTTGACAGCAACGGCACTGATCCACAGTGCTTAAAAGGTTCGAACAGACCGAACAGCGTAAGCAtggtactgtatgtatattgtataatgCAAGCGTTCTTGCTGAGACCTACAACTAATCTGATTTGTGACATACATGATATTTCCTTCTTCGTCTGTATGTAAGAATCCCTTTTCcacaacacacttcctctcGAGTAACtacagaataagaaaataaacagcagaAAAACCCATTTTAGACACCCCTGTATCTGGGAAAGATATTTTATAAAGTGTATATTCAACAGCTCTTTTAACATTGTGAGAATCACACCTGAAGTAGAATGAACATCCTTGGGCTTTTTCAATATATTAACTCTAGTTCAATTCATGGCCCACTTTCAAGTTTAAAGTAATGATCATTTACTCCGTTATTGTGCTCTGAGGCCTTAAATCAGTGTAAATGGTTCTCAAATATAATTATCTACCTACACCAGAGtggtaattttattaaaatgggcATGCAGATGTCAATCAGACACACATAGGCTTGTTGAGCATCTATATTGATTAAGAATATATCTGATGTGGCTCTTAATTTTGCAGGAGATGAAAATATCTGACTCCTTAAAACATttgttgtgcttttgtttaaGGATACAATTGgtgttaattaaaaatgaaatgaaaagaaaaaa

Function

symbol description
npepps Enables aminopeptidase activity. Predicted to be involved in peptide catabolic process and proteolysis. Predicted to be active in cytoplasm. Is expressed in nervous system; pectoral fin musculature; and proliferative region. Orthologous to human NPEPPS (aminopeptidase puromycin sensitive).

NR:

description
PREDICTED: puromycin-sensitive aminopeptidase

GO: NA

KEGG:

id description
K08776 NPEPPS; puromycin-sensitive aminopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034308716.1 True 4279 mRNA 0.47 23 21086917 21105876

Neighbor

gene id symbol gene type direction distance location
zrsr2 zrsr2,LOC107729896,LOC107602790,LOC107753840 coding upstream 16820 21063417 ~ 21070097 (+)
txlng txlng,LOC107723067,LOC107665847 coding upstream 36444 21043300 ~ 21050473 (+)
hcn5 LOC108270784,LOC103027332,LOC107658208,LOC107712254,LOC107724451,LOC107668864,LOC107569239,LOC107597416 coding upstream 50343 21029394 ~ 21036574 (+)
chrna4b chrna4,LOC105906770,LOC103467111,LOC106941279 coding upstream 97496 20968735 ~ 20989421 (+)
elovl1b LOC108270818,LOC108438650,LOC107656106,LOC107753833,LOC107665848,LOC107562086,LOC107723066 coding upstream 139126 20932742 ~ 20947791 (+)
mrpl45 mrpl45,LOC107753856,LOC107680544 coding downstream 2717 21108593 ~ 21114493 (+)
socs7 socs7 coding downstream 25603 21131479 ~ 21141847 (+)
sp2 sp2,LOC107680542,LOC107753850 coding downstream 37195 21143071 ~ 21153622 (+)
abcc10 abcc10 coding downstream 50542 21156418 ~ 21173344 (+)
si:ch211-69b7.6 NA coding downstream 68153 21174029 ~ 21187064 (+)
G185436 rbbp7,LOC105893332,LOC103023991 non-coding upstream 26689 21059064 ~ 21060228 (+)
G185418 NA non-coding upstream 62357 21002828 ~ 21024560 (+)
G185381 bt3l4,btf3l4,LOC103026176,LOC105028135,LOC107562065 non-coding upstream 119016 20964535 ~ 20967901 (+)
G185330 LOC101478692 non-coding upstream 190456 20890247 ~ 20896461 (+)
G185206 NA non-coding upstream 378890 20705994 ~ 20708027 (+)
LOC113528706 NA non-coding downstream 131428 21237304 ~ 21248130 (+)
G185500 NA non-coding downstream 284475 21390351 ~ 21390568 (+)
G185501 LOC108270736,LOC105903432 non-coding downstream 284968 21390844 ~ 21391810 (+)
G185502 NA non-coding downstream 289486 21395362 ~ 21404052 (+)
G185503 NA non-coding downstream 301603 21407479 ~ 21409792 (+)
G184979 NA other upstream 936023 20149971 ~ 20150894 (+)
ccl44 LOC108271213 other upstream 1215454 19865798 ~ 19871463 (+)
LOC113534304 slc1a6,LOC108270573,LOC108437295,LOC107685347,LOC108271210,LOC105901002,LOC107747749,LOC107757933 other upstream 1241679 19836145 ~ 19845238 (+)
tax1bp3 tax1bp3,LOC107685157,LOC107747253,LOC107680510 other upstream 1252503 19827986 ~ 19834414 (+)
rps15 rps15,abhd8,LOC107685215,LOC107578086 other upstream 1386643 19695227 ~ 19700274 (+)
wipf2a LOC108270800 other downstream 83372 21189248 ~ 21210539 (+)
si:dkey-28e7.3 LOC108270845,LOC108438669,LOC107718874,LOC107753848,LOC107674537,LOC107680538 other downstream 146269 21252145 ~ 21265055 (+)
trnap-agg_1 NA other downstream 853012 21958888 ~ 21958959 (+)
pcdh17 pcdh17,LOC107687749,LOC107572292,LOC107718221,LOC107739552 other downstream 1206566 22312442 ~ 22381020 (+)
glrx2 glrx2 other downstream 3102000 24207876 ~ 24210763 (+)

Expression


Co-expression Network