LOC113537281


Basic Information

Item Value
gene id LOC113537281
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 16580236 ~ 16580303 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003403746.1
GTGGGTGATGACTTCAATATTCTTCACTTTGACCTGACTGTCCAGTGATGAAAGACTTCAGTCTGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003403746.1 True 68 ncRNA 0.41 1 16580236 16580303

Neighbor

gene id symbol gene type direction distance location
rgmd LOC108271392,LOC107576053 coding upstream 251647 16322156 ~ 16328589 (+)
hsd11b1la hsd11b1l coding upstream 294956 16279979 ~ 16285280 (+)
LOC113533225 NA coding upstream 305033 16272968 ~ 16275203 (+)
LOC113538695 NA coding upstream 331045 16247727 ~ 16249191 (+)
LOC113538485 LOC100304649 coding upstream 346399 16211346 ~ 16233837 (+)
hmg20b hmg20b,LOC107586380,LOC107719660,LOC107655186,LOC107729671 coding downstream 17657 16597960 ~ 16602762 (+)
unc13a LOC108270949,LOC108430111 coding downstream 25823 16606126 ~ 16650115 (+)
chaf1a chaf1a coding downstream 194155 16774458 ~ 16786199 (+)
hdgfl2 hdgfrp2,LOC108270897,LOC108430101,LOC107676974,LOC107717991 coding downstream 221501 16801804 ~ 16814246 (+)
ap3d1 ap3d1,LOC107593327,LOC107676965,LOC107586409 coding downstream 234305 16814608 ~ 16847204 (+)
G182483 NA non-coding upstream 319920 16260058 ~ 16260316 (+)
G182190 NA non-coding upstream 571001 16006054 ~ 16009235 (+)
G182116 NA non-coding upstream 589826 15988630 ~ 15990410 (+)
G182115 NA non-coding upstream 592255 15938100 ~ 15987981 (+)
G182167 NA non-coding upstream 686709 15893292 ~ 15893527 (+)
LOC117598408 zbtb7a,LOC108270628 non-coding downstream 128322 16708625 ~ 16725527 (+)
LOC117598387 NA non-coding downstream 272105 16852408 ~ 16857137 (+)
G182906 NA non-coding downstream 380356 16960659 ~ 16961299 (+)
G182910 NA non-coding downstream 409016 16989319 ~ 16989519 (+)
G182932 NA non-coding downstream 499334 17079637 ~ 17083529 (+)
LOC113532318 NA other upstream 323454 16255047 ~ 16256782 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 906254 15668798 ~ 15673982 (+)
pdzk1ip1 NA other upstream 1868509 14708927 ~ 14711727 (+)
si:dkey-121a11.3 LOC108270690,LOC107588106,LOC107592730 other upstream 1930551 14622543 ~ 14649685 (+)
ankrd29 ankrd29,LOC107731532,LOC107653646,LOC107715109,LOC107669827 other upstream 1980257 14589880 ~ 14599979 (+)
G182819 NA other downstream 3000 16583303 ~ 16584943 (+)
G182877 NA other downstream 332955 16913258 ~ 16922922 (+)
si:ch211-126j24.1 LOC108270963,LOC108411470,LOC107550685,LOC107588448,LOC107697062 other downstream 541596 17121899 ~ 17189315 (+)
LOC113528769 klc4 other downstream 615977 17196280 ~ 17222532 (+)
kcnh1b kcnh1b,LOC108270513,LOC108411957,LOC107689936,LOC107753489,LOC107570545,LOC105026838,LOC103369331,LOC106564801 other downstream 785395 17365698 ~ 17411425 (+)

Expression


Co-expression Network