trnag-gcc_13


Basic Information

Item Value
gene id trnag-gcc_13
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 13265764 ~ 13265835 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnag-gcc_13
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGAggccgggttcgattcccggccaatGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-gcc_13 True 72 tRNA 0.61 1 13265764 13265835

Neighbor

gene id symbol gene type direction distance location
hsh2d NA coding upstream 170801 13088273 ~ 13094963 (+)
tpm4a tpm4,tpm4a,LOC108424981,LOC103036175,LOC107561904,LOC107665514,LOC107757474,LOC107715082 coding upstream 179833 13065988 ~ 13085931 (+)
si:ch1073-396h14.1 LOC108271130 coding upstream 241539 12992264 ~ 13024225 (+)
safb safb2,LOC108424984,LOC107757477,LOC107653619 coding upstream 275347 12976518 ~ 12990417 (+)
malt2 LOC108270956,LOC108414270 coding upstream 290965 12950398 ~ 12974799 (+)
LOC117598427 NA coding downstream 12123 13277958 ~ 13280512 (+)
cep19 cep19 coding downstream 42606 13308441 ~ 13313447 (+)
impact impact coding downstream 54108 13319943 ~ 13368258 (+)
LOC113532271 hrh4,LOC103041953,LOC107678092,LOC108424938,LOC107559824 coding downstream 113961 13379796 ~ 13397775 (+)
rpl36 rpl36,LOC106560598 coding downstream 160835 13426670 ~ 13430143 (+)
G180695 NA non-coding upstream 62616 13136137 ~ 13203148 (+)
G180534 NA non-coding upstream 414585 12850960 ~ 12851179 (+)
G180516 NA non-coding upstream 424482 12836868 ~ 12841282 (+)
G180268 NA non-coding upstream 583201 12654422 ~ 12682563 (+)
G180267 NA non-coding upstream 611549 12653796 ~ 12654215 (+)
G180833 NA non-coding downstream 33445 13299280 ~ 13302297 (+)
G180838 NA non-coding downstream 136052 13401887 ~ 13406255 (+)
G180926 NA non-coding downstream 182110 13447945 ~ 13448184 (+)
G180945 NA non-coding downstream 363860 13629695 ~ 13640963 (+)
G181136 NA non-coding downstream 831825 14097660 ~ 14100987 (+)
trnag-gcc_12 NA other upstream 1870 13263824 ~ 13263894 (+)
trnag-gcc_11 NA other upstream 7688 13258008 ~ 13258076 (+)
trnag-gcc_10 NA other upstream 9640 13256057 ~ 13256124 (+)
trnag-gcc_9 NA other upstream 15323 13250370 ~ 13250441 (+)
aqp12 LOC108271384,LOC108424976 other upstream 26127 13236477 ~ 13239637 (+)
trnag-gcc_14 NA other downstream 1872 13267707 ~ 13267777 (+)
trnag-gcc_15 NA other downstream 3821 13269656 ~ 13269729 (+)
trnag-gcc_16 NA other downstream 7713 13273548 ~ 13273617 (+)
trnag-gcc_17 NA other downstream 9651 13275486 ~ 13275556 (+)
G180834 NA other downstream 35420 13301255 ~ 13305716 (+)

Expression


Co-expression Network