trnag-gcc_14


Basic Information

Item Value
gene id trnag-gcc_14
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 13267707 ~ 13267777 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnag-gcc_14
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGgaggcccgggttcgattcccggccaatGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-gcc_14 True 71 tRNA 0.62 1 13267707 13267777

Neighbor

gene id symbol gene type direction distance location
hsh2d NA coding upstream 172744 13088273 ~ 13094963 (+)
tpm4a tpm4,tpm4a,LOC108424981,LOC103036175,LOC107561904,LOC107665514,LOC107757474,LOC107715082 coding upstream 181776 13065988 ~ 13085931 (+)
si:ch1073-396h14.1 LOC108271130 coding upstream 243482 12992264 ~ 13024225 (+)
safb safb2,LOC108424984,LOC107757477,LOC107653619 coding upstream 277290 12976518 ~ 12990417 (+)
malt2 LOC108270956,LOC108414270 coding upstream 292908 12950398 ~ 12974799 (+)
LOC117598427 NA coding downstream 10181 13277958 ~ 13280512 (+)
cep19 cep19 coding downstream 40664 13308441 ~ 13313447 (+)
impact impact coding downstream 52166 13319943 ~ 13368258 (+)
LOC113532271 hrh4,LOC103041953,LOC107678092,LOC108424938,LOC107559824 coding downstream 112019 13379796 ~ 13397775 (+)
rpl36 rpl36,LOC106560598 coding downstream 158893 13426670 ~ 13430143 (+)
G180695 NA non-coding upstream 64559 13136137 ~ 13203148 (+)
G180534 NA non-coding upstream 416528 12850960 ~ 12851179 (+)
G180516 NA non-coding upstream 426425 12836868 ~ 12841282 (+)
G180268 NA non-coding upstream 585144 12654422 ~ 12682563 (+)
G180267 NA non-coding upstream 613492 12653796 ~ 12654215 (+)
G180833 NA non-coding downstream 31503 13299280 ~ 13302297 (+)
G180838 NA non-coding downstream 134110 13401887 ~ 13406255 (+)
G180926 NA non-coding downstream 180168 13447945 ~ 13448184 (+)
G180945 NA non-coding downstream 361918 13629695 ~ 13640963 (+)
G181136 NA non-coding downstream 829883 14097660 ~ 14100987 (+)
trnag-gcc_13 NA other upstream 1872 13265764 ~ 13265835 (+)
trnag-gcc_12 NA other upstream 3813 13263824 ~ 13263894 (+)
trnag-gcc_11 NA other upstream 9631 13258008 ~ 13258076 (+)
trnag-gcc_10 NA other upstream 11583 13256057 ~ 13256124 (+)
trnag-gcc_9 NA other upstream 17266 13250370 ~ 13250441 (+)
trnag-gcc_15 NA other downstream 1879 13269656 ~ 13269729 (+)
trnag-gcc_16 NA other downstream 5771 13273548 ~ 13273617 (+)
trnag-gcc_17 NA other downstream 7709 13275486 ~ 13275556 (+)
G180834 NA other downstream 33478 13301255 ~ 13305716 (+)
G180936 NA other downstream 227813 13495590 ~ 13495985 (+)

Expression


Co-expression Network