trnaq-uug_4


Basic Information

Item Value
gene id trnaq-uug_4
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 23937017 ~ 23937088 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnaq-uug_4
GTTTCCATGGTGTAATGGTTAGCACTCTGGACTTTGAATCCAGGAATCTGAGTTCAAATCTCGGTGGAACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaq-uug_4 True 72 tRNA 0.44 1 23937017 23937088

Neighbor

gene id symbol gene type direction distance location
trnaq-uug_3 NA coding upstream 2311 23934635 ~ 23934706 (+)
trnaq-cug_11 NA coding upstream 2814 23934132 ~ 23934203 (+)
trnaq-uug_2 NA coding upstream 4080 23932866 ~ 23932937 (+)
dennd1b dennd1b coding upstream 10873 23835703 ~ 23926144 (+)
LOC113526144 LOC108270555 coding upstream 463448 23413029 ~ 23473569 (+)
trnaq-cug_12 NA coding downstream 1221 23938309 ~ 23938380 (+)
trnaq-uug_5 NA coding downstream 1729 23938817 ~ 23938888 (+)
trnaq-uug_6 NA coding downstream 9904 23946992 ~ 23947063 (+)
aspm aspm,LOC104953288,LOC107578396 coding downstream 41785 23978873 ~ 24003792 (+)
b3galt2 LOC108270796,LOC108438755,LOC103041183 coding downstream 180730 24117818 ~ 24138641 (+)
G186882 NA non-coding upstream 109115 23826676 ~ 23827902 (+)
G186868 NA non-coding upstream 136055 23795730 ~ 23800962 (+)
G186864 NA non-coding upstream 144890 23791920 ~ 23792127 (+)
G186814 NA non-coding upstream 222646 23712033 ~ 23714371 (+)
G186798 NA non-coding upstream 260449 23669018 ~ 23676568 (+)
G186949 NA non-coding downstream 216027 24153115 ~ 24203702 (+)
G186951 NA non-coding downstream 218692 24155780 ~ 24162236 (+)
G186976 NA non-coding downstream 224180 24161268 ~ 24186454 (+)
G186977 NA non-coding downstream 225201 24162289 ~ 24173634 (+)
G186950 NA non-coding downstream 256253 24193341 ~ 24202566 (+)
pcdh17 pcdh17,LOC107687749,LOC107572292,LOC107718221,LOC107739552 other upstream 1555997 22312442 ~ 22381020 (+)
trnap-agg_1 NA other upstream 1978058 21958888 ~ 21958959 (+)
si:dkey-28e7.3 LOC108270845,LOC108438669,LOC107718874,LOC107753848,LOC107674537,LOC107680538 other upstream 2671962 21252145 ~ 21265055 (+)
wipf2a LOC108270800 other upstream 2726478 21189248 ~ 21210539 (+)
G184979 NA other upstream 3786123 20149971 ~ 20150894 (+)
glrx2 glrx2 other downstream 270788 24207876 ~ 24210763 (+)
oaz1a oaz1 other downstream 626312 24563400 ~ 24568643 (+)
LOC113523924 nell1 other downstream 1594657 25531745 ~ 25696872 (+)
polr2l polr2l other downstream 2248774 26185862 ~ 26212115 (+)
G188164 NA other downstream 2269854 26206942 ~ 26210010 (+)

Expression


Co-expression Network