trnar-acg_9


Basic Information

Item Value
gene id trnar-acg_9
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 25506423 ~ 25506495 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnar-acg_9
GGGCCAGTGGCGCAATGGATAAAGCGTCTGACTACGGATCAGAAGATTCTAGGTTCGACTCCTGGCTGGCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-acg_9 True 73 tRNA 0.56 1 25506423 25506495

Neighbor

gene id symbol gene type direction distance location
slc6a5 slc6a5 coding upstream 21613 25455708 ~ 25484810 (+)
prmt3 prmt3 coding upstream 57662 25387312 ~ 25448761 (+)
htatip2 htatip2,LOC107557281,LOC107662344,LOC107579432 coding upstream 123423 25357983 ~ 25383000 (+)
nav2a nav2,LOC106561918 coding upstream 179769 25204119 ~ 25326654 (+)
e2f8 e2f8 coding upstream 306437 25188293 ~ 25199986 (+)
tollip tollip coding downstream 417685 25924180 ~ 25930589 (+)
LOC113523928 ap2a2,LOC106562310,LOC106587467 coding downstream 532891 26039386 ~ 26062656 (+)
slc38a7 slc38a7,LOC107596458,LOC107683258 coding downstream 577162 26083657 ~ 26095138 (+)
helz2a helz2 coding downstream 593029 26099524 ~ 26138619 (+)
LOC113524556 sdhaf2,LOC107685224 coding downstream 717322 26223817 ~ 26227916 (+)
G187782 NA non-coding upstream 160932 25345291 ~ 25345491 (+)
G187675 NA non-coding upstream 215449 25290513 ~ 25290974 (+)
G187668 NA non-coding upstream 233824 25272276 ~ 25272599 (+)
G187612 NA non-coding upstream 330334 25175808 ~ 25176089 (+)
G187563 NA non-coding upstream 384308 25121247 ~ 25122115 (+)
G187895 lrp4 non-coding downstream 240615 25747110 ~ 25750632 (+)
G187961 NA non-coding downstream 412056 25918551 ~ 25919605 (+)
G187970 NA non-coding downstream 435397 25941892 ~ 25949972 (+)
G188127 LOC108271167 non-coding downstream 482303 25988798 ~ 25993403 (+)
G188168 NA non-coding downstream 603128 26109623 ~ 26109848 (+)
oaz1a oaz1 other upstream 937780 24563400 ~ 24568643 (+)
glrx2 glrx2 other upstream 1295660 24207876 ~ 24210763 (+)
pcdh17 pcdh17,LOC107687749,LOC107572292,LOC107718221,LOC107739552 other upstream 3125403 22312442 ~ 22381020 (+)
trnap-agg_1 NA other upstream 3547464 21958888 ~ 21958959 (+)
si:dkey-28e7.3 LOC108270845,LOC108438669,LOC107718874,LOC107753848,LOC107674537,LOC107680538 other upstream 4241368 21252145 ~ 21265055 (+)
LOC113523924 nell1 other downstream 25250 25531745 ~ 25696872 (+)
polr2l polr2l other downstream 679367 26185862 ~ 26212115 (+)
G188164 NA other downstream 700447 26206942 ~ 26210010 (+)
syt7b syt7,LOC108271440,LOC103462425,LOC101476086,LOC103139426,LOC102796193,LOC100697404,LOC108250198,LOC102203020 other downstream 754035 26260530 ~ 26352035 (+)

Expression


Co-expression Network