G188744


Basic Information

Item Value
gene id G188744
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 905466 ~ 913373 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU223423
ctctgaccgcttaataaacataataaaaataataaacataataaacataataaacgtcactctgaccgcttaataaacataataaacataataaacataataaacgtcactctgaccgcttaataaacatcataaacataataaacataataaacgtcactctgaccgcttaataaacataataaacataataaacataataaacataataaacgtcactctgaccgcttaataaacatcataaacataataaacataataaacgtcactctgaccgcttaataaacataataaacataataaacataataaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223423 True 314 lncRNA 0.25 4 905466 913373

Neighbor

gene id symbol gene type direction distance location
get4 get4,LOC104959995,LOC103374619 coding upstream 37657 858068 ~ 867809 (+)
zgc:174164 NA coding upstream 49383 836051 ~ 856083 (+)
htra1b htra1,LOC107660481 coding upstream 81484 794438 ~ 823982 (+)
btbd16 btbd16 coding upstream 152426 721051 ~ 753040 (+)
LOC117598554 NA coding upstream 630020 274381 ~ 275446 (+)
LOC113535123 NA coding downstream 63150 976523 ~ 996803 (+)
dbf4b NA coding downstream 85414 998787 ~ 1009835 (+)
adam11 LOC108431418 coding downstream 100556 1013929 ~ 1046212 (+)
fkbp10b fkbp10,LOC108273773 coding downstream 142418 1055791 ~ 1065735 (+)
LOC113535337 NA coding downstream 166590 1079963 ~ 1111182 (+)
G188730 NA non-coding upstream 70897 834103 ~ 834569 (+)
G188715 NA non-coding upstream 163714 740426 ~ 741752 (+)
G188694 NA non-coding upstream 210997 692959 ~ 694469 (+)
G188681 NA non-coding upstream 270483 634400 ~ 634983 (+)
G188605 NA non-coding upstream 393490 509030 ~ 511976 (+)
G188747 NA non-coding downstream 9232 922605 ~ 922805 (+)
G188749 NA non-coding downstream 10912 924285 ~ 924490 (+)
G188761 NA non-coding downstream 61424 974797 ~ 975865 (+)
G188770 NA non-coding downstream 133127 1046500 ~ 1050620 (+)
G189170 NA non-coding downstream 632425 1545798 ~ 1546582 (+)
plekha1b plekha1,LOC107716481,LOC107660484 other upstream 120475 725033 ~ 784991 (+)
ccser2b ccser2 other upstream 683047 137521 ~ 222419 (+)
LOC113535146 LOC108261429 other downstream 44159 957532 ~ 974218 (+)
LOC117598477 NA other downstream 654143 1567516 ~ 1665813 (+)
LOC117598558 NA other downstream 1024314 1937687 ~ 1952224 (+)
pyyb NA other downstream 1611683 2525056 ~ 2528820 (+)
G189864 NA other downstream 1847320 2760693 ~ 2761010 (+)

Expression


Co-expression Network