Gene
RNA
| Item | Value |
|---|---|
| gene id | G188908 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 506908 ~ 508671 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223615 | True | 337 | lncRNA | 0.37 | 3 | 506908 | 508671 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117598555 | NA | coding | upstream | 124332 | 633003 ~ 636382 (-) |
| waplb | wapl,LOC108435041 | coding | upstream | 184277 | 692948 ~ 718933 (-) |
| vps35l | c13h16orf62,cunh16orf62,zgc:163107,cssa28h16orf62 | coding | upstream | 359366 | 868037 ~ 879127 (-) |
| becn1 | becn1,atg6 | coding | upstream | 374023 | 882694 ~ 888949 (-) |
| LOC113535267 | rnd2,LOC108273785,LOC103364924,LOC102195949 | coding | upstream | 417517 | 926188 ~ 943327 (-) |
| LOC113535197 | LOC108273631 | non-coding | downstream | 367174 | 135208 ~ 139734 (-) |
| G188909 | NA | non-coding | upstream | 360 | 509031 ~ 511009 (-) |
| G188918 | NA | non-coding | upstream | 24836 | 533507 ~ 534276 (-) |
| G188923 | NA | non-coding | upstream | 36953 | 545624 ~ 773583 (-) |
| G188929 | NA | non-coding | upstream | 182928 | 691599 ~ 784981 (-) |
| G188922 | NA | non-coding | upstream | 261782 | 770453 ~ 772015 (-) |
| LOC117598518 | NA | other | upstream | 127826 | 636497 ~ 638042 (-) |
| c12h10orf88 | c13h10orf88 | other | upstream | 240067 | 748738 ~ 834760 (-) |
| G189180 | NA | other | upstream | 1056219 | 1564890 ~ 1565260 (-) |
| G189199 | NA | other | upstream | 1059615 | 1568286 ~ 1571073 (-) |
| LOC113534879 | NA | other | upstream | 1252163 | 1760834 ~ 1773520 (-) |
