pyyb


Basic Information

Item Value
gene id pyyb
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 2525056 ~ 2528820 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU224528
CTCGTTCCCTTCCCTCCCTGCCTGTATATAAGCAGCAGCGTTAGAGACGGCAGGAGAAACGACAGCAACGTTTGAGCTGCACCTCTGCTCCGACCCTCCACGTCCACTACACAACTCAACTGACACAATGAAGTCTTGGTTGGCACCCGTAGCCGTGGTCCTGTGTATCCTGGTGTGTGTGGCAGAGGCGTACCCGCCCAAACCTGAACCTCCTGCAGGAGACGCAGGGCCCGAGGAGCTGGCCAAGTACCACACAGCGCTGCGCCACTACATCAACCTGATCACCAGGCAGAGatatgGGAAGAGATCCTCTCCGGAGGTAGAGATGGCTGAGCTGCTCTTCGGTGATGATGAACAGGACGTGAGGCCGCGaatggACAGAATGGATAATGGTTTTGCCTGGTAGTCGTCTCACTGCATTCCTGCACTCCGCATTTGTCATCTCTCCGTCCTTCTTCATCCCTTTCCCTCTCTGCCATCTTCCTGGAAGTTATACCAATCAGCCAAAGCAGCATCACAATATTGGCAcatgtatctctctttctctctctctttcacgctctttctctctctctgaatctctgtctgtttctctctgtttgaaagttttctgtgaagcgacaattgtaaataatttgttaCTCACCCAATTGCGAATAATAAAGAATgactaaatgttaaaatgtgctTTGACTTCATTTTGTACTGTTCCTTGAGCACACATGCTTTGTGGAATGACGTCACCTGACTCAcggaaatgaatcaaatgaagtgaatcaaatgaat
>XM_026947882.2
CAGCAACGTTTGAGCTGCACCTCTGCTCCGACCCTCCACGTCCACTACACAACTCAACTGACACAATGAAGTCTTGGTTGGCACCCGTAGCCGTGGTCCTGTGTATCCTGGTGTGTGTGGCAGAGGCGTACCCGCCCAAACCTGAACCTCCTGCAGGAGACGCAGGGCCCGAGGAGCTGGCCAAGTACCACACAGCGCTGCGCCACTACATCAACCTGATCACCAGGCAGAGatatgGGAAGAGATCCTCTCCGGAGGTAGAGATGGCTGAGCTGCTCTTCGGTGATGATGAACAGGACGTGAGGCCGCGaatggACAGAATGGATAATGGTTTTGCCTGGTAGTCGTCTCACTGCATTCCTGCACTCCGCATTTGTCATCTCTCCGTCCTTCTTCATCCCTTTCCCTCTCTGCCATCTTCCTGGAAGTTATACCAATCAGCCAAAGCAGCATCACAATATTGGCAcatgtatctctctttctctctctctttcacgctctttctctctctctgaatctctgtctgtttctctctgtttgaaagttttctgtgaagcgacaattgtaaataatttgttaCTCACCCAATTGCGAATAATAAAGAATgactaaatgttaaaa

Function

NR:

description
PREDICTED: peptide Y

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0043169 cation binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224528 True 786 lncRNA 0.49 4 2525056 2528820
XM_026947882.2 False 621 mRNA 0.50 4 2525118 2528717

Neighbor

gene id symbol gene type direction distance location
tut1 tut1 coding upstream 9802 2503394 ~ 2515254 (+)
mki67 NA coding upstream 22226 2489809 ~ 2502830 (+)
raraa raraa,rara,LOC108273576,LOC108410801,LOC107660476,LOC107678286,LOC107716487,LOC107745620 coding upstream 38260 2394076 ~ 2486796 (+)
top2a top2a,LOC107598028,LOC107660475 coding upstream 163961 2347045 ~ 2361095 (+)
LOC113547531 NA coding upstream 220769 2302233 ~ 2304287 (+)
mpp2b mpp2,LOC108273574,LOC108410806 coding downstream 2260 2531080 ~ 2574774 (+)
ngfrb LOC108273578 coding downstream 128040 2656860 ~ 2697247 (+)
LOC113547481 LOC108273850,LOC107735415 coding downstream 370069 2898889 ~ 2906026 (+)
LOC113547478 LOC108273849,LOC108443156 coding downstream 377334 2906154 ~ 2923348 (+)
LOC113547477 adprh,LOC108274007,LOC108411014,LOC108411010 coding downstream 548273 3077093 ~ 3082950 (+)
G189570 med24,LOC107716488,LOC107706820,LOC107660474,LOC107678252,LOC107560528 non-coding upstream 206749 2317318 ~ 2318307 (+)
G189563 NA non-coding upstream 215638 2308226 ~ 2309418 (+)
G189555 NA non-coding upstream 229751 2295086 ~ 2295305 (+)
G189477 NA non-coding upstream 379300 2143152 ~ 2145756 (+)
LOC117598584 NA non-coding upstream 599352 1923984 ~ 1925704 (+)
G189626 NA non-coding downstream 62418 2591238 ~ 2609497 (+)
G189678 NA non-coding downstream 77063 2605883 ~ 2608078 (+)
G189684 NA non-coding downstream 85877 2614697 ~ 2615755 (+)
LOC113547470 NA non-coding downstream 113021 2641841 ~ 2644184 (+)
G189916 NA non-coding downstream 345335 2874155 ~ 2875297 (+)
LOC117598558 NA other upstream 572832 1937687 ~ 1952224 (+)
LOC117598477 NA other upstream 859243 1567516 ~ 1665813 (+)
LOC113535146 LOC108261429 other upstream 1550838 957532 ~ 974218 (+)
plekha1b plekha1,LOC107716481,LOC107660484 other upstream 1740065 725033 ~ 784991 (+)
ccser2b ccser2 other upstream 2302637 137521 ~ 222419 (+)
G189864 NA other downstream 231873 2760693 ~ 2761010 (+)
LOC113547538 NA other downstream 441305 2970125 ~ 3021609 (+)
G190028 NA other downstream 709624 3238444 ~ 3239216 (+)
G190212 NA other downstream 872447 3401267 ~ 3405009 (+)
LOC113547484 LOC108273453 other downstream 901493 3430313 ~ 3453426 (+)

Expression


Co-expression Network