G191490


Basic Information

Item Value
gene id G191490
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 5739978 ~ 5740199 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU226688
aaaaaaaccatgtaAATTGAAAAATACATGATTCAGATATTTACCAAAAGTTCGGtttcacattatttttcattcaattaGAGCATGGAAATTTTTCATGAAGAAATTTTCCCATTAAGAAATTATTCTAAAAGAGAAGTAAATACTTTTGTAAACAACCTTGCAGAGGATTTCCTTATTTTTTGGTTCTTTGTGTAacctaaaaaaaagtttacatctCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226688 True 222 lncRNA 0.26 1 5739978 5740199

Neighbor

gene id symbol gene type direction distance location
zgc:92313 LOC108273548 coding downstream 30689 5692120 ~ 5709289 (-)
vkorc1 vkorl,LOC107719575,LOC107654009,LOC107598672,LOC108441164,LOC108413442 coding downstream 62017 5674724 ~ 5677961 (-)
aldoab aldoa,LOC107660454,LOC107708965,LOC107689930 coding downstream 120988 5614430 ~ 5618990 (-)
si:ch211-180a12.2 LOC108273640 coding downstream 167089 5555957 ~ 5572889 (-)
LOC117598535 NA coding downstream 185071 5545841 ~ 5554907 (-)
LOC113527266 LOC108441168 coding upstream 67621 5807820 ~ 5814472 (-)
LOC113527265 LOC108274106,LOC108441156 coding upstream 77493 5817692 ~ 5849431 (-)
irf3 LOC108273898 coding upstream 126742 5866941 ~ 5882707 (-)
prr12a LOC108273897,LOC108441158,LOC107708947,LOC107664611,LOC107557376,LOC107654018 coding upstream 145306 5885505 ~ 5903485 (-)
si:ch211-255p10.4 LOC108273514,LOC108441159,LOC103358360,LOC103033508,LOC107598587,LOC107654020,LOC107557374 coding upstream 170235 5910434 ~ 5932525 (-)
G191468 NA non-coding downstream 50410 5688594 ~ 5689568 (-)
G191464 NA non-coding downstream 70225 5667884 ~ 5669753 (-)
G191463 NA non-coding downstream 72132 5666173 ~ 5667846 (-)
G191424 NA non-coding downstream 255311 5482620 ~ 5484667 (-)
G191413 NA non-coding downstream 294811 5442962 ~ 5445167 (-)
LOC113527731 NA non-coding upstream 195340 5935539 ~ 5938213 (-)
G191762 NA non-coding upstream 478507 6218706 ~ 6219394 (-)
G191763 NA non-coding upstream 479613 6219812 ~ 6220381 (-)
G191772 kif22 non-coding upstream 511223 6251422 ~ 6252182 (-)
LOC117598466 NA non-coding upstream 519666 6259865 ~ 6261598 (-)
G191430 NA other downstream 126024 5611120 ~ 5613954 (-)
gdpd3b gdpd3 other downstream 249053 5484691 ~ 5490925 (-)
LOC113527048 LOC108274181 other downstream 676560 5059498 ~ 5063418 (-)
G191056 taok2,LOC108273910 other downstream 787119 4949163 ~ 4952859 (-)
trnap-cgg_3 NA other downstream 821001 4911734 ~ 4918977 (-)
LOC113527291 LOC108274042 other upstream 28329 5768528 ~ 5791270 (-)
itga3b itga3 other upstream 806742 6546941 ~ 6594390 (-)
ipmkb ipmk other upstream 1659801 7400000 ~ 7418378 (-)
ccdc6b ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 other upstream 1841151 7581350 ~ 7595881 (-)
ank3b ank3,LOC107746453,LOC107654059 other upstream 1861019 7601218 ~ 7767512 (-)

Expression


Co-expression Network