G192029



Basic Information


Item Value
gene id G192029
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 6696732 ~ 6696970 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>TU227354
GAAACATCTAAAACTAGAGAAAATCAAATTCTCATTGAGACAAAAAGAAGGTCTTTTTAATATCATTTGGCAGccttttattgaatatttcaaCACTAGAGTAAAAGGCAACATTTTAATTTGACATTGTATGtgcaggtttttgttttgtttttgttgatgttgttctgtttttttttttttttttttttttttttttatgtattcgTGTCTCATTTATTAACACTTGTGAATTCTTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU227354 True 239 lncRNA 0.26 1 6696732 6696970

Neighbor


gene id symbol gene type direction distance location
dlx3b dlx3 coding upstream 74085 6618651 ~ 6622647 (+)
ace ace,LOC107664635,LOC107653924 coding upstream 150479 6526233 ~ 6546253 (+)
plce1 plce1,LOC107743958 coding upstream 279923 6330477 ~ 6416809 (+)
slc35g1 slc35g1,si:ch211-197g18.2,LOC107664634,LOC107664593 coding upstream 376626 6310905 ~ 6320106 (+)
lgi1b lgi1,lgi1b,LOC107664615,LOC107743957,LOC107598600,LOC107654035,LOC107708938 coding upstream 386346 6302378 ~ 6310386 (+)
ptges3l ptges3l,si:ch211-131k2.3 coding downstream 42783 6739753 ~ 6745801 (+)
g6pca.2 g6pc,g6pca.2,LOC106579337 coding downstream 57223 6754193 ~ 6757138 (+)
trnap-cgg_4 NA coding downstream 74337 6771307 ~ 6771378 (+)
trnap-ugg_14 NA coding downstream 75471 6772441 ~ 6772512 (+)
trnal-uag_1 NA coding downstream 76633 6773603 ~ 6773674 (+)
G191868 NA non-coding upstream 223266 6463389 ~ 6473466 (+)
G191866 NA non-coding upstream 235718 6460811 ~ 6461014 (+)
G191719 NA non-coding upstream 425847 6268524 ~ 6270885 (+)
G191711 NA non-coding upstream 479638 6215273 ~ 6217094 (+)
G191595 NA non-coding upstream 641527 6001068 ~ 6055205 (+)
G192043 NA non-coding downstream 81194 6778164 ~ 6785596 (+)
G192394 NA non-coding downstream 702373 7399343 ~ 7399628 (+)
G192422 NA non-coding downstream 777467 7474437 ~ 7475004 (+)
G192591 NA non-coding downstream 1242071 7939041 ~ 7939584 (+)
G192650 NA non-coding downstream 1372173 8069143 ~ 8071592 (+)
G191581 NA other upstream 713495 5969743 ~ 5983237 (+)
LOC113527671 LOC108441166,LOC108273636 other upstream 955827 5730154 ~ 5740905 (+)
LOC113527051 LOC108274342,LOC108274341,LOC108425932 other upstream 1356169 5330042 ~ 5340563 (+)
gngt2b NA other upstream 1391823 5303077 ~ 5304909 (+)
G190865 NA other upstream 1857363 4755097 ~ 4839369 (+)
LOC113527389 NA other downstream 28351 6725321 ~ 6728391 (+)
asah2 asah2,LOC107598643 other downstream 125770 6822740 ~ 6836383 (+)
tfam tfam other downstream 731575 7428545 ~ 7436372 (+)
G192484 ank3 other downstream 909011 7605981 ~ 7628111 (+)
LOC113527534 dnah9 other downstream 2571523 9268493 ~ 9357961 (+)

Expression



Co-expression Network