Gene
RNA
| Item | Value |
|---|---|
| gene id | G192422 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 7474437 ~ 7475004 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU227775 | True | 498 | lncRNA | 0.36 | 2 | 7474437 | 7475004 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dkk1b | dkk1 | coding | upstream | 450799 | 7021923 ~ 7023638 (+) |
| prkg1b | prkg1,prkg1b,LOC107654050,LOC107695529,LOC106589397 | coding | upstream | 458700 | 6862071 ~ 7015737 (+) |
| sgms1 | sgms1 | coding | upstream | 658992 | 6796007 ~ 6815445 (+) |
| trnap-cgg_7 | NA | coding | upstream | 684492 | 6789874 ~ 6789945 (+) |
| trnap-ugg_20 | NA | coding | upstream | 685671 | 6788695 ~ 6788766 (+) |
| phyhiplb | phyhipl,phyhiplb,LOC107695536,LOC107727060,LOC107746456 | coding | downstream | 51584 | 7526588 ~ 7547407 (+) |
| rhobtb1 | rhobtb1,LOC107654062,LOC107727061,LOC107745661 | coding | downstream | 297340 | 7772344 ~ 7795900 (+) |
| cabcoco1 | c13h10orf107 | coding | downstream | 337446 | 7812450 ~ 7838426 (+) |
| arid5b | arid5b,LOC107727057 | coding | downstream | 377407 | 7852411 ~ 7938614 (+) |
| adoa | ado | coding | downstream | 499215 | 7974219 ~ 7977168 (+) |
| G192394 | NA | non-coding | upstream | 74809 | 7399343 ~ 7399628 (+) |
| G192043 | NA | non-coding | upstream | 688841 | 6778164 ~ 6785596 (+) |
| G192029 | NA | non-coding | upstream | 777467 | 6696732 ~ 6696970 (+) |
| G191868 | NA | non-coding | upstream | 1000971 | 6463389 ~ 6473466 (+) |
| G191866 | NA | non-coding | upstream | 1013423 | 6460811 ~ 6461014 (+) |
| G192591 | NA | non-coding | downstream | 464037 | 7939041 ~ 7939584 (+) |
| G192650 | NA | non-coding | downstream | 594139 | 8069143 ~ 8071592 (+) |
| G192644 | NA | non-coding | downstream | 651769 | 8126773 ~ 8141060 (+) |
| LOC117598703 | NA | non-coding | downstream | 784210 | 8259214 ~ 8261423 (+) |
| G192716 | NA | non-coding | downstream | 794144 | 8269148 ~ 8270226 (+) |
| tfam | tfam | other | upstream | 38065 | 7428545 ~ 7436372 (+) |
| asah2 | asah2,LOC107598643 | other | upstream | 638054 | 6822740 ~ 6836383 (+) |
| LOC113527389 | NA | other | upstream | 746046 | 6725321 ~ 6728391 (+) |
| G191581 | NA | other | upstream | 1491200 | 5969743 ~ 5983237 (+) |
| LOC113527671 | LOC108441166,LOC108273636 | other | upstream | 1733532 | 5730154 ~ 5740905 (+) |
| G192484 | ank3 | other | downstream | 130977 | 7605981 ~ 7628111 (+) |
| LOC113527534 | dnah9 | other | downstream | 1793489 | 9268493 ~ 9357961 (+) |
| G193383 | LOC108273473 | other | downstream | 1893239 | 9368243 ~ 9369915 (+) |
| trnaq-cug_13 | NA | other | downstream | 2037165 | 9512169 ~ 9512401 (+) |
| trnaq-cug_14 | NA | other | downstream | 2037556 | 9512560 ~ 9512631 (+) |
