ipmkb (ipmk)


Basic Information

Item Value
gene id ipmkb
gene name ipmk
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 7400000 ~ 7418378 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU227786
TGGAATATGCAGGCTCATTTACGCCCGATGGTTTAAATCCAGCCCTTCAAGCAGCAGGGTTGCGCAATAAAACATGGGTTTAAGTAGCTACATTTGAATGGTTTCCCATGTGCTGTATAATTTCTGCAATCCAGAATGCAGAAACACATctgaaaagtgatttttttcaagCTGAGGCTCTGGAAGAAATAATCCAGGTTGGGGATCAGTACTGGAATGGCCATTACTCATGTGAACCCTATCCTAATAGACTAAACCAATTACAGTTTTTGTAATATAGATGTATAACATGTAATAATCAGACTCATATATTAGGTGTATATTTGGCAAATctatc
>XM_026915386.2
CCTTTGTGGCGACGTCGTCGTCGTCACGCATGACGTCACGCGCCTCCTGCGCCTTCTGGGATGGAGAGGCAGCACAGGAGAGCTAGCGTTGAAGTGAATGagaatgaggatgaggatgagtgtGAGTGCTAAGTGTGCTTTTCTCTCGGTTTATGGCGTGTGTTTGTTCCGGGTGGAGTGCCGTGTTGTTGTCCTTCCCCCATATCTCGGAGTAATTAGACGAGCAGCGCTGTGTAAACATCTCTGAAGTCAGGAAGTGGGATGTGGCCCGGCTCTATCTTCACTTACAGTCTGCGATGTGACACAATCCCAGCGCCTCGGGCACGCGCTGCCACTCTTCCCCGCGGATATAAGAAGACGTGAGTGATGGCATCCGCTTCATGCAGCTGGACCACGACGAGGACGACGGACGGCTTGGATTCGGCTCGTGCTGGAAGACTGAAAAGCGATACGTGTGTCGTAATGTAGCGGACTGTGGTGCattttttgttgtagttgttgttgttgcccTGACAAAGCGTCATTTGCGTCGGATAATGGACTCGTCGGTAACGCTGGGCAGGCTGGAGCTCGGGCGCGCCGCCGTGAGCCCGGGCACGCGCCTCAATGGACCGGGGGCGAGGGAAAGGAGcgcgcagcagcagcagcagcacgcGGGGCCGCGCGCGGGACCTCTCGGCTGCGTGCCGCTCTCGCACCAGGTCGCGGGCCACAAGTACGGAGTGGACAAAGTAGGTATACTGCAGCATCCCGATGGTACGGTACTAAAGCAGCTTCAGCCTCCACCCAGAGGACCCAGAGAACTGCAGTTCTATAGCATGGTTTATGCCAAGGATTGCTGTGACCCCTGCCTACTCGAGCTGCAGCAGCATCTTCCCAAGTACTACAGCACTTGGTCTTCTCCTGACAGCCCCACAGAGCTGTATCTGAAGCTGGAGGATGTCACACGCCGCTTCCAGAAGCCCTGCATCATGGACGTGAAGATCGGCCAGCGTAGCTACGACCCTTTTGCCTCACAGGAAAAGCGTGAGCAACAGATCAGGAAATACCCCCTGATGGAAGAGATTGGCTTCCTGGTGCTTGGGATGAGGGTGTACAACGTGGGCTTGGACAGCTTTGACACATATGACCAGCATTATGGAAGGGGTCTCGTGAAGGATACCATCAAAGATGGACTATGTAAGTTCTTCTACAACGGCGACCTCCTCCGCCGGGATGTCATCACTGCCAGCATCGCCAAGGTCCAGAGCATCCTTCGTTGGTTTGAAAAACAGAGCCAGTTGAACTTTTACGCCAGCTCTCTACTCTTCGTCTACGAGGGGCTTCCTTTGACCCCGGTGGAGAAATCCAGCACCCGGAGCCTACAGAAGAATGAAGGGGTTCTGGAGTACAACAACAACATCGAGCAGAGCCTCTCCACCATGTACTCCCTGCACAAGAAAAGCTGCATGCAGAACCACCATCCAAGCAAGCAGGACAACAGCGCATGGCACGGCCTCACAGAGCTGGACGCCGGCGAGCAGGAGACGGAGGAGATGCCAGCCGAGGTGGAGGTCCGAATGATCGACTTTGCCCACGTCTTCCCCAGCGAGGTCCCCGACCACGGCTACATCTACGGCCTGAGGAACCTGCTCAAGGTGCTGCAGCAGATACTggatgactaaaaaaaaaaaaaaatgttcttctcATGGTTCTTCAGCCATAATGCTCGGCTCATCTCATCAGAGAGGATATTTTTAAAGTTGTAGCTACTCTCATTCCTCTCTCCCCTGTCCAGGTCCTGCACTACCTGGACTACAATGAAGTAACCCATTTGAAAAGCTTGGTCTTATAGTTGGTCTATATGCGCctgatcgtttttttttttttttttaaatataaaaagtgttttactcAGGTAAACCAATTACATGGTCATTTATAGTATTTATCCTGGCAGCAATTCATACCATCTTAACCCTTTCTCTGTTTTGCTTCAGCATAATAGCTTGTATTTCCCAAGACAAGTTAAACAAggtattgtttttaatttgtttttacataGGTGTATCATTTGCTTCTCATGCCTGTGGTTGGTAAGACTAAGGATTTGGAGTACATAGCTGTCGATTTCTTTAACCTGCGCTGCCAAAATGACCCTgcctgtgttttttattttaaacttgcaATTGACTAGCCTACACAAATTCCCCTGTGTAAATATGGTATTATATTTTCTGTGATTTAACCATGCAATATGCTGACCCAACAATGGGGAGGCTCGGATCTTTATTGACGTTTTAAAAAACGGTCAAGTGTATTGATGAGCTGTCCTGCCTGTCgtgactgaaagaaaaaaaaaacaaacttaagTTCATACCCTTTTCGACTATCTTTAAGCCATGCTTTATTAATGCTATATTAGcttataaaatgttttgataCACTTTCCTGAGTGAATGAAACTTTATTGTGCAGACATAGTATTGATTTGAGCGCGGGAGGCAAAAACCAGCATAGTGAtcttgattattaaaaaaaaaaaaaaaaaaaaaaaaaatcactgattgaaagagggagaaaaatcactggaaaaaaaagagaggaaaaactaTTATCAAAATTAAGACCAGGATTctcagatttttcttttccctctcaGAGTCATTGGACAGctatttttgaatttgtttattatcCTTAACTTTgcattgtatttatattaacaaattctgttgcagcttttttttattattattttaaacaatcatttttaaattctagGGCATTGCAGATTTTATAGATTCTCATATAGGTGCGTAATCACTGTATACACTGACATACTTAATATGTGAAATGTATTACTCATCTCAAAGCTGATAAGTTGCTTGCTTTATTCTGCGTTTACTGCAAATATCTGGAAAGTGTTCTTTTCCAATGGAATGCATTTCACATTTTGGTTGGAACGTATATGTAGTATGTCTTATGACCTTGTCTTATGCTGAATGACTGCCGCTGCATTTGACTCGTCTGAAACTCTGATTTAACATTCCTGTTGATTTAAGCAGAACAAGGGCACGCTTTCTGCTTGTCCCCCCCGAAGAAGAAAGTCGAGCTCTGAAGGAAAAAGCAAAATTGGAATTGCATGTCTTTGGGCAAAGTCGAAACTACCTGTGTGTCTAATTCCCTGGCTCTTGTCTCACTCTCAGGAATGTATTAGTGTTACAAGGACTTCAAAGTAGTCGAGACATCCGTATGCAAGAACTCGAAGGAAACAGGCCGTGGGCCAGTTAAAGCTAGATGCATTTGTTCTGTAGCATGCGCCATTCAGTTGAGGATTTTGTTTGCATTCCAGTTATTTTTGGTCCTGCtataacatttacagcattcatgcACTGAAGCAAGTGGAAATACTGTATGATGTATACATCAGCCTTCCTGCTGTGAACTAATCCATTTGTCTctgatttgttttaaatcttattctcactcataattattttattattttttttaagcagttgCACCTGACTGAGATTTGCGCTGGTGCTCAAAGCACTTTAGTGATTTGCTAGACTGGATTTTTGCCTATGGAACTAGTTTAATTGAACTAATTGTAAAGGCATCTTACACTTCAAAGGTCTTCAAGTAGAAGAATCTAATGTTAACCATTTTGTAACCTGGTTTTgatcttactttttttttcctgtggcaaataaaaggacttttttttattttacgttctctcaaaaaaaaaaaaaaaaaaaaaaagggtaaatTTGATCTTATTAAGTATAGTTAATCTTTGCTGTCCTGGAATATGCAGGCTCATTTACGCCCGATGGTTTAAATCCAGCCCTTCAAGCAGCAGGGTTGCGCAATAAAACATGGGTTTAAGTAGCTACATTTGAATGGTTTCCCATGTGCTGTATAATTTCTGCAATCCAGAATGCAGAAACACATctgaaaagtgatttttttcaagCTGAGGCTCTGGAAGAAATAATCCAGGTTGGGGATCAGTACTGGAATGGCCATTACTCATGTGAACCCTATCCTAATAGACTAAACCAATTACAGTTTTTGTAATATAGATGTATAACATGTAATAATCAGACTCATATATTAGGTGTATATTTGGCAAATctatcattattaataaaaatcactTAATAATG

Function

symbol description
ipmk Enables flavonoid binding activity; inositol tetrakisphosphate 6-kinase activity; and inositol-1,4,5-trisphosphate 3-kinase activity. Involved in inositol trisphosphate metabolic process and necroptotic process. Located in nucleoplasm.

NR:

description
inositol polyphosphate multikinase-like

GO: NA

KEGG:

id description
K00915 IPMK, IPK2; inositol-polyphosphate multikinase

RNA

RNA id representative length rna type GC content exon number start site end site
TU227786 False 337 lncRNA 0.38 1 7400027 7400363
XM_026915386.2 True 4157 mRNA 0.44 6 7400000 7418378

Neighbor

gene id symbol gene type direction distance location
pcdh15b pcdh15b,pcdh15,LOC107695531,LOC107654051,LOC108273410,LOC108411428 coding downstream 167925 7047571 ~ 7232075 (-)
a1cf a1cf,LOC107695528,LOC107708930,LOC107654048 coding downstream 552034 6836437 ~ 6847966 (-)
aarsd1 aarsd1,LOC107695514,LOC107739756,LOC107708900 coding downstream 633900 6756785 ~ 6766100 (-)
g6pca.1 LOC108274343 coding downstream 647268 6747052 ~ 6752732 (-)
kat7b kat7,LOC108443263,LOC107598609,LOC107739754,LOC107708935,LOC107654043 coding downstream 659418 6727581 ~ 6740582 (-)
ube2d1b ube2d1,ube2d1b,LOC106607701,LOC105891213,LOC107717106,LOC107553913,LOC107733527,LOC105010549 coding upstream 3588 7421966 ~ 7427834 (-)
zgc:171971 LOC108273425 coding upstream 17131 7435509 ~ 7442712 (-)
fam13c fam13c coding upstream 128685 7547063 ~ 7560750 (-)
slc16a9b slc16a9 coding upstream 155698 7574076 ~ 7579872 (-)
tmem26b tmem26 coding upstream 386142 7804520 ~ 7809766 (-)
G192385 NA non-coding downstream 87113 7228390 ~ 7312887 (-)
G192074 NA non-coding downstream 584565 6813165 ~ 6815435 (-)
G192075 sgms1 non-coding downstream 590242 6808205 ~ 6809758 (-)
G192062 NA non-coding downstream 599924 6799642 ~ 6800076 (-)
G192061 NA non-coding downstream 603494 6796111 ~ 6796506 (-)
G192437 NA non-coding upstream 10209 7428587 ~ 7428883 (-)
G192545 NA non-coding upstream 210933 7629311 ~ 7630373 (-)
G192583 NA non-coding upstream 421985 7840363 ~ 7841460 (-)
G192584 NA non-coding upstream 423251 7841629 ~ 7841947 (-)
G192585 NA non-coding upstream 423682 7842060 ~ 7842634 (-)
itga3b itga3 other downstream 805610 6546941 ~ 6594390 (-)
LOC113527291 LOC108274042 other downstream 1608730 5768528 ~ 5791270 (-)
G191430 NA other downstream 1786046 5611120 ~ 5613954 (-)
gdpd3b gdpd3 other downstream 1909075 5484691 ~ 5490925 (-)
LOC113527048 LOC108274181 other downstream 2336582 5059498 ~ 5063418 (-)
ccdc6b ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 other upstream 162972 7581350 ~ 7595881 (-)
ank3b ank3,LOC107746453,LOC107654059 other upstream 182840 7601218 ~ 7767512 (-)
si:dkey-94l16.4 LOC108273749 other upstream 1429284 8847662 ~ 8857748 (-)
LOC113527700 shisa6,LOC108273473,LOC108424875,LOC107706559 other upstream 1949839 9368217 ~ 9419487 (-)
trnam-cau_28 NA other upstream 2097436 9515814 ~ 9515885 (-)

Expression


Co-expression Network