Item | Value |
---|---|
gene id | G193169 |
gene name | NA |
gene type | non-coding |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047606.1 |
NCBI id | CM018552.1 |
chromosome length | 26563515 |
location | 9158159 ~ 9158568 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
id | name | namespace |
---|---|---|
GO:0005212 | structural constituent of eye lens | molecular_function |
id | description |
---|---|
ko04744 | Phototransduction |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU228721 | True | 410 | lncRNA | 0.43 | 1 | 9158159 | 9158568 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
map2k4b | map2k4,LOC108274195,LOC108424869,LOC107556463,LOC107719678,LOC108433489 | coding | upstream | 1871 | 9142501 ~ 9156288 (+) |
adprm | adprm | coding | upstream | 18759 | 9135203 ~ 9139400 (+) |
trnal-aag_6 | NA | coding | upstream | 50226 | 9107852 ~ 9107933 (+) |
trnaa-ugc_7 | NA | coding | upstream | 50402 | 9107686 ~ 9107757 (+) |
LOC113527360 | LOC108274022,LOC108424857,LOC105888776,LOC107653912 | coding | upstream | 67613 | 9040824 ~ 9090546 (+) |
trnad-guc_4 | NA | coding | downstream | 106206 | 9264774 ~ 9264845 (+) |
trnad-guc_5 | NA | coding | downstream | 107695 | 9266263 ~ 9266334 (+) |
trnar-ccu_4 | NA | coding | downstream | 351156 | 9509724 ~ 9509796 (+) |
LOC113527682 | LOC108273946 | coding | downstream | 364788 | 9523356 ~ 9559377 (+) |
plxdc1 | LOC108274329,LOC108424883 | coding | downstream | 447563 | 9606131 ~ 9627459 (+) |
G193170 | NA | non-coding | upstream | 64912 | 9057399 ~ 9093247 (+) |
G192858 | NA | non-coding | upstream | 239914 | 8918040 ~ 8918245 (+) |
LOC117598667 | NA | non-coding | upstream | 556389 | 8596654 ~ 8601770 (+) |
G192760 | NA | non-coding | upstream | 642225 | 8514382 ~ 8515934 (+) |
G192737 | NA | non-coding | upstream | 770042 | 8310878 ~ 8388117 (+) |
G193168 | NA | non-coding | downstream | 865 | 9159433 ~ 9184089 (+) |
G193386 | NA | non-coding | downstream | 220705 | 9379273 ~ 9380115 (+) |
G193390 | NA | non-coding | downstream | 227575 | 9386143 ~ 9386394 (+) |
G193458 | NA | non-coding | downstream | 357353 | 9515921 ~ 9516139 (+) |
G193509 | NA | non-coding | downstream | 428597 | 9587165 ~ 9587819 (+) |
G192484 | ank3 | other | upstream | 1530048 | 7605981 ~ 7628111 (+) |
tfam | tfam | other | upstream | 1721787 | 7428545 ~ 7436372 (+) |
asah2 | asah2,LOC107598643 | other | upstream | 2321776 | 6822740 ~ 6836383 (+) |
LOC113527389 | NA | other | upstream | 2429768 | 6725321 ~ 6728391 (+) |
G191581 | NA | other | upstream | 3174922 | 5969743 ~ 5983237 (+) |
LOC113527534 | dnah9 | other | downstream | 109925 | 9268493 ~ 9357961 (+) |
G193383 | LOC108273473 | other | downstream | 209675 | 9368243 ~ 9369915 (+) |
trnaq-cug_13 | NA | other | downstream | 353601 | 9512169 ~ 9512401 (+) |
trnaq-cug_14 | NA | other | downstream | 353992 | 9512560 ~ 9512631 (+) |
mrpl58 | mrpl58 | other | downstream | 354216 | 9512784 ~ 9515616 (+) |