Gene
RNA
| Item | Value |
|---|---|
| gene id | G193319 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 9158191 ~ 9158569 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU228886 | True | 379 | lncRNA | 0.43 | 1 | 9158191 | 9158569 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113527142 | gas7,LOC107653998,LOC107719691 | coding | downstream | 25865 | 9093141 ~ 9132326 (-) |
| trnal-aag_5 | NA | coding | downstream | 74381 | 9083729 ~ 9083810 (-) |
| trnal-aag_4 | NA | coding | downstream | 75251 | 9082859 ~ 9082940 (-) |
| trnal-uag_6 | NA | coding | downstream | 76185 | 9081925 ~ 9082006 (-) |
| trnal-uag_5 | NA | coding | downstream | 76934 | 9081176 ~ 9081257 (-) |
| myocd | myocd | coding | upstream | 3655 | 9162224 ~ 9251115 (-) |
| foxk2 | foxk2,LOC107719587 | coding | upstream | 322981 | 9481550 ~ 9499180 (-) |
| wdr45b | wdr45b,LOC107598578 | coding | upstream | 341691 | 9500260 ~ 9509293 (-) |
| si:ch1073-357b18.4 | LOC108273401 | coding | upstream | 358640 | 9517209 ~ 9520812 (-) |
| LOC113527284 | LOC108424836 | coding | upstream | 436217 | 9594786 ~ 9596403 (-) |
| G193315 | NA | non-coding | downstream | 1904 | 9154442 ~ 9156287 (-) |
| G193138 | LOC108273751 | non-coding | downstream | 229543 | 8927981 ~ 8928648 (-) |
| G192945 | NA | non-coding | downstream | 616910 | 8464309 ~ 8541281 (-) |
| G192953 | eef2k | non-coding | downstream | 644721 | 8480420 ~ 8513470 (-) |
| G192954 | NA | non-coding | downstream | 673013 | 8483608 ~ 8485178 (-) |
| G193316 | NA | non-coding | upstream | 865 | 9159434 ~ 9184089 (-) |
| G193334 | NA | non-coding | upstream | 43423 | 9201992 ~ 9202672 (-) |
| G193355 | dnah9 | non-coding | upstream | 113848 | 9272417 ~ 9272654 (-) |
| G193356 | NA | non-coding | upstream | 115509 | 9274078 ~ 9274290 (-) |
| G193359 | NA | non-coding | upstream | 122084 | 9280653 ~ 9280952 (-) |
| si:dkey-94l16.4 | LOC108273749 | other | downstream | 300443 | 8847662 ~ 8857748 (-) |
| ank3b | ank3,LOC107746453,LOC107654059 | other | downstream | 1390679 | 7601218 ~ 7767512 (-) |
| ccdc6b | ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 | other | downstream | 1562310 | 7581350 ~ 7595881 (-) |
| ipmkb | ipmk | other | downstream | 1739813 | 7400000 ~ 7418378 (-) |
| itga3b | itga3 | other | downstream | 2563801 | 6546941 ~ 6594390 (-) |
| LOC113527700 | shisa6,LOC108273473,LOC108424875,LOC107706559 | other | upstream | 209648 | 9368217 ~ 9419487 (-) |
| trnam-cau_28 | NA | other | upstream | 357245 | 9515814 ~ 9515885 (-) |
| trnar-ucg_9 | NA | other | upstream | 357503 | 9516072 ~ 9516144 (-) |
| LOC113527759 | LOC108273488 | other | upstream | 428597 | 9587166 ~ 9590116 (-) |
| trnal-aag_7 | NA | other | upstream | 431806 | 9590375 ~ 9590456 (-) |
