Item | Value |
---|---|
gene id | G193355 |
gene name | dnah9 |
gene type | non-coding |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047606.1 |
NCBI id | CM018552.1 |
chromosome length | 26563515 |
location | 9272417 ~ 9272654 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
symbol | description |
---|---|
dnah9 | Predicted to enable minus-end-directed microtubule motor activity. Acts upstream of or within epithelial cilium movement involved in determination of left/right asymmetry. Is expressed in several structures, including mesoderm; nervous system; neural tube; pleuroperitoneal region; and tail bud. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 40. Orthologous to human DNAH9 (dynein axonemal heavy chain 9). |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU228925 | True | 238 | lncRNA | 0.47 | 1 | 9272417 | 9272654 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
myocd | myocd | coding | downstream | 21302 | 9162224 ~ 9251115 (-) |
LOC113527142 | gas7,LOC107653998,LOC107719691 | coding | downstream | 140091 | 9093141 ~ 9132326 (-) |
trnal-aag_5 | NA | coding | downstream | 188607 | 9083729 ~ 9083810 (-) |
trnal-aag_4 | NA | coding | downstream | 189477 | 9082859 ~ 9082940 (-) |
trnal-uag_6 | NA | coding | downstream | 190411 | 9081925 ~ 9082006 (-) |
foxk2 | foxk2,LOC107719587 | coding | upstream | 208896 | 9481550 ~ 9499180 (-) |
wdr45b | wdr45b,LOC107598578 | coding | upstream | 227606 | 9500260 ~ 9509293 (-) |
si:ch1073-357b18.4 | LOC108273401 | coding | upstream | 244555 | 9517209 ~ 9520812 (-) |
LOC113527284 | LOC108424836 | coding | upstream | 322132 | 9594786 ~ 9596403 (-) |
trnac-gca_15 | NA | coding | upstream | 355762 | 9628416 ~ 9628487 (-) |
G193334 | NA | non-coding | downstream | 69745 | 9201992 ~ 9202672 (-) |
G193316 | NA | non-coding | downstream | 88328 | 9159434 ~ 9184089 (-) |
G193319 | NA | non-coding | downstream | 113848 | 9158191 ~ 9158569 (-) |
G193315 | NA | non-coding | downstream | 116130 | 9154442 ~ 9156287 (-) |
G193138 | LOC108273751 | non-coding | downstream | 343769 | 8927981 ~ 8928648 (-) |
G193356 | NA | non-coding | upstream | 1424 | 9274078 ~ 9274290 (-) |
G193359 | NA | non-coding | upstream | 7999 | 9280653 ~ 9280952 (-) |
G193360 | dnah9 | non-coding | upstream | 10039 | 9282693 ~ 9283127 (-) |
G193361 | NA | non-coding | upstream | 10646 | 9283300 ~ 9283510 (-) |
G193411 | NA | non-coding | upstream | 100977 | 9373631 ~ 9373832 (-) |
si:dkey-94l16.4 | LOC108273749 | other | downstream | 414669 | 8847662 ~ 8857748 (-) |
ank3b | ank3,LOC107746453,LOC107654059 | other | downstream | 1504905 | 7601218 ~ 7767512 (-) |
ccdc6b | ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 | other | downstream | 1676536 | 7581350 ~ 7595881 (-) |
ipmkb | ipmk | other | downstream | 1854039 | 7400000 ~ 7418378 (-) |
itga3b | itga3 | other | downstream | 2678027 | 6546941 ~ 6594390 (-) |
LOC113527700 | shisa6,LOC108273473,LOC108424875,LOC107706559 | other | upstream | 95563 | 9368217 ~ 9419487 (-) |
trnam-cau_28 | NA | other | upstream | 243160 | 9515814 ~ 9515885 (-) |
trnar-ucg_9 | NA | other | upstream | 243418 | 9516072 ~ 9516144 (-) |
LOC113527759 | LOC108273488 | other | upstream | 314512 | 9587166 ~ 9590116 (-) |
trnal-aag_7 | NA | other | upstream | 317721 | 9590375 ~ 9590456 (-) |