Gene
RNA
| Item | Value |
|---|---|
| gene id | G193356 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 9274078 ~ 9274290 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU228926 | True | 213 | lncRNA | 0.46 | 1 | 9274078 | 9274290 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| myocd | myocd | coding | downstream | 22963 | 9162224 ~ 9251115 (-) |
| LOC113527142 | gas7,LOC107653998,LOC107719691 | coding | downstream | 141752 | 9093141 ~ 9132326 (-) |
| trnal-aag_5 | NA | coding | downstream | 190268 | 9083729 ~ 9083810 (-) |
| trnal-aag_4 | NA | coding | downstream | 191138 | 9082859 ~ 9082940 (-) |
| trnal-uag_6 | NA | coding | downstream | 192072 | 9081925 ~ 9082006 (-) |
| foxk2 | foxk2,LOC107719587 | coding | upstream | 207260 | 9481550 ~ 9499180 (-) |
| wdr45b | wdr45b,LOC107598578 | coding | upstream | 225970 | 9500260 ~ 9509293 (-) |
| si:ch1073-357b18.4 | LOC108273401 | coding | upstream | 242919 | 9517209 ~ 9520812 (-) |
| LOC113527284 | LOC108424836 | coding | upstream | 320496 | 9594786 ~ 9596403 (-) |
| trnac-gca_15 | NA | coding | upstream | 354126 | 9628416 ~ 9628487 (-) |
| G193355 | dnah9 | non-coding | downstream | 1424 | 9272417 ~ 9272654 (-) |
| G193334 | NA | non-coding | downstream | 71406 | 9201992 ~ 9202672 (-) |
| G193316 | NA | non-coding | downstream | 89989 | 9159434 ~ 9184089 (-) |
| G193319 | NA | non-coding | downstream | 115509 | 9158191 ~ 9158569 (-) |
| G193315 | NA | non-coding | downstream | 117791 | 9154442 ~ 9156287 (-) |
| G193359 | NA | non-coding | upstream | 6363 | 9280653 ~ 9280952 (-) |
| G193360 | dnah9 | non-coding | upstream | 8403 | 9282693 ~ 9283127 (-) |
| G193361 | NA | non-coding | upstream | 9010 | 9283300 ~ 9283510 (-) |
| G193411 | NA | non-coding | upstream | 99341 | 9373631 ~ 9373832 (-) |
| G193412 | NA | non-coding | upstream | 99636 | 9373926 ~ 9374190 (-) |
| si:dkey-94l16.4 | LOC108273749 | other | downstream | 416330 | 8847662 ~ 8857748 (-) |
| ank3b | ank3,LOC107746453,LOC107654059 | other | downstream | 1506566 | 7601218 ~ 7767512 (-) |
| ccdc6b | ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 | other | downstream | 1678197 | 7581350 ~ 7595881 (-) |
| ipmkb | ipmk | other | downstream | 1855700 | 7400000 ~ 7418378 (-) |
| itga3b | itga3 | other | downstream | 2679688 | 6546941 ~ 6594390 (-) |
| LOC113527700 | shisa6,LOC108273473,LOC108424875,LOC107706559 | other | upstream | 93927 | 9368217 ~ 9419487 (-) |
| trnam-cau_28 | NA | other | upstream | 241524 | 9515814 ~ 9515885 (-) |
| trnar-ucg_9 | NA | other | upstream | 241782 | 9516072 ~ 9516144 (-) |
| LOC113527759 | LOC108273488 | other | upstream | 312876 | 9587166 ~ 9590116 (-) |
| trnal-aag_7 | NA | other | upstream | 316085 | 9590375 ~ 9590456 (-) |
