Gene
RNA
| Item | Value |
|---|---|
| gene id | G193359 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 9280653 ~ 9280952 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU228929 | True | 300 | lncRNA | 0.40 | 1 | 9280653 | 9280952 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| myocd | myocd | coding | downstream | 29538 | 9162224 ~ 9251115 (-) |
| LOC113527142 | gas7,LOC107653998,LOC107719691 | coding | downstream | 148327 | 9093141 ~ 9132326 (-) |
| trnal-aag_5 | NA | coding | downstream | 196843 | 9083729 ~ 9083810 (-) |
| trnal-aag_4 | NA | coding | downstream | 197713 | 9082859 ~ 9082940 (-) |
| trnal-uag_6 | NA | coding | downstream | 198647 | 9081925 ~ 9082006 (-) |
| foxk2 | foxk2,LOC107719587 | coding | upstream | 200598 | 9481550 ~ 9499180 (-) |
| wdr45b | wdr45b,LOC107598578 | coding | upstream | 219308 | 9500260 ~ 9509293 (-) |
| si:ch1073-357b18.4 | LOC108273401 | coding | upstream | 236257 | 9517209 ~ 9520812 (-) |
| LOC113527284 | LOC108424836 | coding | upstream | 313834 | 9594786 ~ 9596403 (-) |
| trnac-gca_15 | NA | coding | upstream | 347464 | 9628416 ~ 9628487 (-) |
| G193356 | NA | non-coding | downstream | 6363 | 9274078 ~ 9274290 (-) |
| G193355 | dnah9 | non-coding | downstream | 7999 | 9272417 ~ 9272654 (-) |
| G193334 | NA | non-coding | downstream | 77981 | 9201992 ~ 9202672 (-) |
| G193316 | NA | non-coding | downstream | 96564 | 9159434 ~ 9184089 (-) |
| G193319 | NA | non-coding | downstream | 122084 | 9158191 ~ 9158569 (-) |
| G193360 | dnah9 | non-coding | upstream | 1741 | 9282693 ~ 9283127 (-) |
| G193361 | NA | non-coding | upstream | 2348 | 9283300 ~ 9283510 (-) |
| G193411 | NA | non-coding | upstream | 92679 | 9373631 ~ 9373832 (-) |
| G193412 | NA | non-coding | upstream | 92974 | 9373926 ~ 9374190 (-) |
| G193410 | NA | non-coding | upstream | 100780 | 9381732 ~ 9382342 (-) |
| si:dkey-94l16.4 | LOC108273749 | other | downstream | 422905 | 8847662 ~ 8857748 (-) |
| ank3b | ank3,LOC107746453,LOC107654059 | other | downstream | 1513141 | 7601218 ~ 7767512 (-) |
| ccdc6b | ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 | other | downstream | 1684772 | 7581350 ~ 7595881 (-) |
| ipmkb | ipmk | other | downstream | 1862275 | 7400000 ~ 7418378 (-) |
| itga3b | itga3 | other | downstream | 2686263 | 6546941 ~ 6594390 (-) |
| LOC113527700 | shisa6,LOC108273473,LOC108424875,LOC107706559 | other | upstream | 87265 | 9368217 ~ 9419487 (-) |
| trnam-cau_28 | NA | other | upstream | 234862 | 9515814 ~ 9515885 (-) |
| trnar-ucg_9 | NA | other | upstream | 235120 | 9516072 ~ 9516144 (-) |
| LOC113527759 | LOC108273488 | other | upstream | 306214 | 9587166 ~ 9590116 (-) |
| trnal-aag_7 | NA | other | upstream | 309423 | 9590375 ~ 9590456 (-) |
