Gene
RNA
| Item | Value |
|---|---|
| gene id | G193386 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 9379273 ~ 9380115 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU228956 | True | 843 | lncRNA | 0.38 | 1 | 9379273 | 9380115 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnad-guc_5 | NA | coding | upstream | 112939 | 9266263 ~ 9266334 (+) |
| trnad-guc_4 | NA | coding | upstream | 114428 | 9264774 ~ 9264845 (+) |
| map2k4b | map2k4,LOC108274195,LOC108424869,LOC107556463,LOC107719678,LOC108433489 | coding | upstream | 222985 | 9142501 ~ 9156288 (+) |
| adprm | adprm | coding | upstream | 239873 | 9135203 ~ 9139400 (+) |
| trnal-aag_6 | NA | coding | upstream | 271340 | 9107852 ~ 9107933 (+) |
| trnar-ccu_4 | NA | coding | downstream | 129609 | 9509724 ~ 9509796 (+) |
| LOC113527682 | LOC108273946 | coding | downstream | 143241 | 9523356 ~ 9559377 (+) |
| plxdc1 | LOC108274329,LOC108424883 | coding | downstream | 226016 | 9606131 ~ 9627459 (+) |
| LOC113527304 | lasp1,LOC108274031,LOC108424884,LOC108258608,LOC108413872,LOC107689048 | coding | downstream | 250550 | 9630665 ~ 9643176 (+) |
| LOC113527805 | NA | coding | downstream | 254762 | 9634877 ~ 9635067 (+) |
| G193168 | NA | non-coding | upstream | 195184 | 9159433 ~ 9184089 (+) |
| G193169 | NA | non-coding | upstream | 220705 | 9158159 ~ 9158568 (+) |
| G193170 | NA | non-coding | upstream | 286026 | 9057399 ~ 9093247 (+) |
| G192858 | NA | non-coding | upstream | 461028 | 8918040 ~ 8918245 (+) |
| LOC117598667 | NA | non-coding | upstream | 777503 | 8596654 ~ 8601770 (+) |
| G193390 | NA | non-coding | downstream | 6028 | 9386143 ~ 9386394 (+) |
| G193458 | NA | non-coding | downstream | 135806 | 9515921 ~ 9516139 (+) |
| G193509 | NA | non-coding | downstream | 207050 | 9587165 ~ 9587819 (+) |
| G193542 | NA | non-coding | downstream | 272057 | 9652172 ~ 9653260 (+) |
| G193544 | NA | non-coding | downstream | 314794 | 9694909 ~ 9780955 (+) |
| G193383 | LOC108273473 | other | upstream | 9358 | 9368243 ~ 9369915 (+) |
| LOC113527534 | dnah9 | other | upstream | 21312 | 9268493 ~ 9357961 (+) |
| G192484 | ank3 | other | upstream | 1751162 | 7605981 ~ 7628111 (+) |
| tfam | tfam | other | upstream | 1942901 | 7428545 ~ 7436372 (+) |
| asah2 | asah2,LOC107598643 | other | upstream | 2542890 | 6822740 ~ 6836383 (+) |
| trnaq-cug_13 | NA | other | downstream | 132054 | 9512169 ~ 9512401 (+) |
| trnaq-cug_14 | NA | other | downstream | 132445 | 9512560 ~ 9512631 (+) |
| mrpl58 | mrpl58 | other | downstream | 132669 | 9512784 ~ 9515616 (+) |
| trnaq-cug_15 | NA | other | downstream | 133649 | 9513764 ~ 9513835 (+) |
| arhgap23b | LOC108273815 | other | downstream | 275172 | 9655287 ~ 9691595 (+) |
