G193390


Basic Information

Item Value
gene id G193390
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 9386143 ~ 9386394 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU228960
gtcttttttaacaaaaaatgcagtcttcacagatCAAAGCCAGAGCTCATAACAAGAGTAGACATttagagctattaactgtttaagcAATCAATCAagcagggcacacctgggcaacaagaaacacctgtcagtcacatgtcccaatatttttgatcacttgaaaagtgggtgggttcaaacaaaaggtgccatgttctgatttgtttaacacatctagatgtaaatatcaggaaataaaagctgaaattc

Function

NR:

description
ubiquitin-conjugating enzyme E2 N-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228960 True 252 lncRNA 0.37 1 9386143 9386394

Neighbor

gene id symbol gene type direction distance location
trnad-guc_5 NA coding upstream 119809 9266263 ~ 9266334 (+)
trnad-guc_4 NA coding upstream 121298 9264774 ~ 9264845 (+)
map2k4b map2k4,LOC108274195,LOC108424869,LOC107556463,LOC107719678,LOC108433489 coding upstream 229855 9142501 ~ 9156288 (+)
adprm adprm coding upstream 246743 9135203 ~ 9139400 (+)
trnal-aag_6 NA coding upstream 278210 9107852 ~ 9107933 (+)
trnar-ccu_4 NA coding downstream 123330 9509724 ~ 9509796 (+)
LOC113527682 LOC108273946 coding downstream 136962 9523356 ~ 9559377 (+)
plxdc1 LOC108274329,LOC108424883 coding downstream 219737 9606131 ~ 9627459 (+)
LOC113527304 lasp1,LOC108274031,LOC108424884,LOC108258608,LOC108413872,LOC107689048 coding downstream 244271 9630665 ~ 9643176 (+)
LOC113527805 NA coding downstream 248483 9634877 ~ 9635067 (+)
G193386 NA non-coding upstream 6028 9379273 ~ 9380115 (+)
G193168 NA non-coding upstream 202054 9159433 ~ 9184089 (+)
G193169 NA non-coding upstream 227575 9158159 ~ 9158568 (+)
G193170 NA non-coding upstream 292896 9057399 ~ 9093247 (+)
G192858 NA non-coding upstream 467898 8918040 ~ 8918245 (+)
G193458 NA non-coding downstream 129527 9515921 ~ 9516139 (+)
G193509 NA non-coding downstream 200771 9587165 ~ 9587819 (+)
G193542 NA non-coding downstream 265778 9652172 ~ 9653260 (+)
G193544 NA non-coding downstream 308515 9694909 ~ 9780955 (+)
G193645 NA non-coding downstream 437653 9824047 ~ 9824468 (+)
G193383 LOC108273473 other upstream 16228 9368243 ~ 9369915 (+)
LOC113527534 dnah9 other upstream 28182 9268493 ~ 9357961 (+)
G192484 ank3 other upstream 1758032 7605981 ~ 7628111 (+)
tfam tfam other upstream 1949771 7428545 ~ 7436372 (+)
asah2 asah2,LOC107598643 other upstream 2549760 6822740 ~ 6836383 (+)
trnaq-cug_13 NA other downstream 125775 9512169 ~ 9512401 (+)
trnaq-cug_14 NA other downstream 126166 9512560 ~ 9512631 (+)
mrpl58 mrpl58 other downstream 126390 9512784 ~ 9515616 (+)
trnaq-cug_15 NA other downstream 127370 9513764 ~ 9513835 (+)
arhgap23b LOC108273815 other downstream 268893 9655287 ~ 9691595 (+)

Expression


Co-expression Network