Gene
RNA
| Item | Value |
|---|---|
| gene id | G193433 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 9408413 ~ 9408673 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU229003 | True | 261 | lncRNA | 0.40 | 1 | 9408413 | 9408673 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| myocd | myocd | coding | downstream | 157298 | 9162224 ~ 9251115 (-) |
| LOC113527142 | gas7,LOC107653998,LOC107719691 | coding | downstream | 276087 | 9093141 ~ 9132326 (-) |
| trnal-aag_5 | NA | coding | downstream | 324603 | 9083729 ~ 9083810 (-) |
| trnal-aag_4 | NA | coding | downstream | 325473 | 9082859 ~ 9082940 (-) |
| trnal-uag_6 | NA | coding | downstream | 326407 | 9081925 ~ 9082006 (-) |
| foxk2 | foxk2,LOC107719587 | coding | upstream | 72877 | 9481550 ~ 9499180 (-) |
| wdr45b | wdr45b,LOC107598578 | coding | upstream | 91587 | 9500260 ~ 9509293 (-) |
| si:ch1073-357b18.4 | LOC108273401 | coding | upstream | 108536 | 9517209 ~ 9520812 (-) |
| LOC113527284 | LOC108424836 | coding | upstream | 186113 | 9594786 ~ 9596403 (-) |
| trnac-gca_15 | NA | coding | upstream | 219743 | 9628416 ~ 9628487 (-) |
| G193432 | NA | non-coding | downstream | 68 | 9408082 ~ 9408345 (-) |
| G193431 | NA | non-coding | downstream | 538 | 9407674 ~ 9407875 (-) |
| G193410 | NA | non-coding | downstream | 26071 | 9381732 ~ 9382342 (-) |
| G193412 | NA | non-coding | downstream | 34223 | 9373926 ~ 9374190 (-) |
| G193411 | NA | non-coding | downstream | 34581 | 9373631 ~ 9373832 (-) |
| G193447 | NA | non-coding | upstream | 66411 | 9475084 ~ 9475984 (-) |
| G193453 | NA | non-coding | upstream | 101060 | 9509733 ~ 9509939 (-) |
| G193474 | NA | non-coding | upstream | 125056 | 9533729 ~ 9534024 (-) |
| G193476 | NA | non-coding | upstream | 126786 | 9535459 ~ 9536612 (-) |
| G193567 | NA | non-coding | upstream | 222009 | 9630682 ~ 9668932 (-) |
| si:dkey-94l16.4 | LOC108273749 | other | downstream | 550665 | 8847662 ~ 8857748 (-) |
| ank3b | ank3,LOC107746453,LOC107654059 | other | downstream | 1640901 | 7601218 ~ 7767512 (-) |
| ccdc6b | ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 | other | downstream | 1812532 | 7581350 ~ 7595881 (-) |
| ipmkb | ipmk | other | downstream | 1990035 | 7400000 ~ 7418378 (-) |
| itga3b | itga3 | other | downstream | 2814023 | 6546941 ~ 6594390 (-) |
| trnam-cau_28 | NA | other | upstream | 107141 | 9515814 ~ 9515885 (-) |
| trnar-ucg_9 | NA | other | upstream | 107399 | 9516072 ~ 9516144 (-) |
| LOC113527759 | LOC108273488 | other | upstream | 178493 | 9587166 ~ 9590116 (-) |
| trnal-aag_7 | NA | other | upstream | 181702 | 9590375 ~ 9590456 (-) |
| LOC113527760 | LOC108273447,LOC108424882,LOC103023950,LOC100693129,LOC101473140,LOC103373902 | other | upstream | 181888 | 9590561 ~ 9592549 (-) |
