afap1 (afap1,LOC107733469,LOC107657296,LOC107584377)


Basic Information

Item Value
gene id afap1
gene name afap1,LOC107733469,LOC107657296,LOC107584377
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 23604837 ~ 23688417 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU238120
tttcctataacagcagatcctgaagtgttttattcctcttacaccacagcagtggCAGTGCTAACATCGTTTGTTTAGAAGAACGACATGTCAAacatttttatccgtttatagttacatttactgctgtggaaacaagttcgttcctgttctcacttactttacagcagctataaacagtcattctctcaccagcctctcttttctttaaataaagcttgtcatgttactgagaaaccatgaagcgtaaactcctctgtcctgaagatgtcggaaaacttaaagttacagctttatctctgactgttacaaggtgctgacactggagactccttccatagacgttaaataaacatcttcttacagaaaacttcaccatatcaatgattataattttcctttgttaaatctgtttttttaattattaggcttagattatatggagcttccgccatacaagttcctgtgtaagttgttactatggaaacgataatgtactagaacgagcgcattaatataaaccaccagagctgctgttatggaaaatgaatcaacaccttctgaccaatcagaatccagacttcaacagcactgtggtttaatgTCTAATGTGTGACCTTCTATAGTGAAGTgttaaacatacacatacacaagtgggggcggagctaatttctggTCCgcatgaaatggaaaaaaataaaactttaatcacGTGGTAATATTACAGTTTCTtgacctatttttttttttttttaagtatataaTTATACCACATTTAAAGACACtttgaaaaatgacaaactgcacctttaaactctataaaagcacaacatgtGATCCGTTGTTATAAAAATTTTCCTGTTTCgtctccatgtttgtttttctcacgtTGTTGCCATGGAGAGTAGCGTTAAGATGGCTGTCCTCTGTCCTGCCCGTATTGCTGTATGCTCTTAAAGCAGGACGTACAGTATTTTGCCGTATGATGGTATCAGAACTGTATTAGTTTTGGGTTCACTGGTGCTTTAGAGTCCTCGCTTTTGCTCTTAAATCCGGTGAGATTAACAGAGCAACACTTGGTGCTTCATATAGAAATAAGAAAGAAGCGATTTTTAGAGACTACTGCCAGCGTATTCACATTCGAggcacatttattattattttccatacACAGCTGGTTTCTTGCgctttgcattttttatttaacaaacatacattttaatcTGTCAAAGCATATGTAAATatactctttttttaattgttttgttttttttttattttcactgatgtCAGTCCCATGAGTCTGCAGTCCACTTGTGTGAGGGGAAATCTAGGAATCTGAGTAATATTCAAGAAATGTTTCTTTCAGCCTTACAGACGAGTAAACATGTTCTATCTTTCCGAAATGTCTTTGCTGTCCCTCGATACGAGTCCagcgtctctctgtctctccctcgcACGCATTAAGAGACCAACGATGTCATAAATGTGAACTGTAATAAGTATTGTTTCAGTGGGAAGGGTCAGAGGTCAAGGTTCA
>XM_026915393.2
agagagagagaggtgtcgCTTTTCATCAGGCACCGTCTGCACAATAAAGAAGGCACAGAAAGTGTGCTGAATTCTgctcagaaagaaagaagaaagaaagaaagaaaggaagaaaaagaaaggatagGTCTATTCAGAGCCCTTCGGAACTGACAAAGACTTGAGGCACTTGAAGCAAACAAAGGAGGAGATCGTACAGTTTCAGGGCAGGACGTGGTAGAAggagggaagaaaagaaaaagaggaggagagaagaaagtTTTCCGAGTTGAAGAGCAGATAGTAGCCGGTCTCTCTGGGCTGGACTGGATGAAAGCAGGCGCCTGGACGCTCGGTTAGATGTGATCACCTTCACCATGCGGAGTGACCCTATTCTGTTCGCCTCCAGGGCAATGGAGGAGCTGGTGGCGGAGCTGCGGGTCTTCTTGGAGCTGTTGGACCGAGAGTATTTGAGcgcagcagtgagagagaagaaacTGCAGATCTCCAACATTCTACACAGAGTCCTGTCTGCTAAAGAATCATCCTATAAGGCCGAGGTCCACAGCTCACTTCCTGCCCCGCCTCAGATGCCCCTCCCAGAGATCCCACATCCATGGCTGCCTCCTGATAACGGACCACCTCCTCTGCCCAGTTCCTCTCTTCCTGAGGGCTACTACGAGGAAGCCGTGCCTCTGGGTCCTGGGAAAGCTCCAGAATACATCACCTCccAGTATGACTCAGACGCCATGAGCAGCTCGTACGAGTCATATgacgaggaagaggaggatgggAAGGGACAGAAGATGCGCCATCAGTGGCCCTCGGAGGAGGCGTCTATGGACTTAGTGAAGGACGCACGCATCTGCGCTTTCCTTCTGCGCAAGAAACGCTTTGGACAGTGGACCAAACTGCTCTGCGTCATCAAAGACAATAAACTCCTCTGCTATAAGTCATCTAAAGACCAGACTCCTCAGATGGAGCTCCTCCTGTCCGGCTGCAGTGTCACTCACATCCCCAAAgacagcaagaagaagaagcacgAGCTGAAGATCGTCCACCAGGGGGCAGACGCTCTGGTGCTCGCTGTACACAGCAAAGAGCAGGCTGAAGAGTGGCTCAAGGTGATGAGAGAGGTGTGTGCTAACGGGACCGGAGCAGTGGACTCTGACGGAGCCGTGTCCGGATCTTCCGTTAACAAAGCCGAGCTGGAAAAGAAGTTGTCCTGTGACAGACCGAGTTCTGATGGAGAGCCCAGTCATGAAAATGGTGTCTCAGATGGAAAAGATCCAGTTAAAGGGAAGAAGAACTCGAAGACTGAACAGAAAGGCACAGTGGGGAAGGTGGCAGGGAAGAAAATCACTAAGATCATCAGCCTGGGGAAGAAGAAGCCGTCCACGGATGAACAGACGTCATCAGCGGAGGAGGACGTCCCGACCAGCGGCTATCTGAACGTGCTTTCCAACAACCGCTGGAGAGAGAGGTGGTGTCGGCTGAAGGATAACCAGCTGTTGCTGCATAAGGACCGGGAGGATCTGAAGACGCACATGGCCTCGCTGCCCCTGCGTGGATGTGAGGTCATCCCCGGGCTCGACTCCAAGCACCCGTTTGCTTTTAGGCTGCTGAGGAACGGACAGGAAGTGGCTGTGCTTGAGgcctCGTCCTCTGAGAGTATGGGTCGGTGGTTGGGGGTGTTACTGGCAGAGACAGGCTCTACGACAGACCCTGCCACTCTACACTATGATTACATAGACGTGGAGACCACCGCAAACGTCATTCAGCTGGCCAAGCAGTCCTTCTGCTTCACCAGTAAGCGAGCCATTTCTCCAAACCCGTACCTGGATAACCCGGTGAACGGTTACGCCCGGCCCTCAGGTGTGGCCCTGCACTATGACGACGTTCCCTGCATTAACGGATCGGTATGGTTTCACACTCATAAGGACCCACAGCTCGGTTCTCTTGAGGCTCACTATGAGAACGCTGAGCTTTATGAGAACATGCCTTCCCCCAAACTGGAGACTCGCTCCTCGTCCAAACTGAGCTGGCCACCATCTTGCTCTGGCCATTACAAAACGCCCGTCTCTTCTTCCTCAGCTTCCTCTTCCTCCGCTGCTAATACTACCTCTCAGATGAAGGGAAAGAAAGCCACGACTGTCAACGGTTTAGCTGCCAAACAGAAGCTGGACAAGAACCAACCCAAAAAGACCAACGGAACCAACGGGTCCGTGCCAGTGAAACGCAACAATTCAAGTGTGGATCAGTATAAATACGGGAAGAACAGAGTGGAAGCGGATGCTAAGAGGCTCCAGGCGAAAGAAGAAGAGCTGATGAAAAGAAAGCAGGAGATTCGTAACCGTCTCACACAGCTGAAGAAAGACAGGAGAGACCTGCGCACGGCCATCGAGAACAGCACCGgtaagcGCTCTCAGGCCTCGCTGACGGAGCGGCTGAAGAAAGTGGAGGACGAGTGTAAGCTGAAAGAGGAGGAGCGAGTGAACTTGGAGCTGGAGCTGACGGAGGTGAAGGAGAGTCTGAAGAAGGCTCTGAGTGGAGGAGTCACTCTCGGACTGACCATCGAACCCAAGACCAGCAGCTCCAGTCCACAGTCTCCGGTGCTGGTCAGGCGTACGGTGGATAACTCGCCCATCTCCAGCTGTGACACCAGCGACACCGAGACCTGCTCACTGCCAGTCAACAGCGCCTCCTTACTGCGACGCCAAGTACCGCAGAAAAACCCTCCAGTACGGGGCCATGTGCTCAGGAAGGCCAAgGAATGGGAGATGAAATCTGGCACGTAAACACTCACTTTCAGCttctttattattgttattattattatttttgttttcctgtttgtatttatttaaatttgcatATAGAAGTGATTGAAAGCAAATCGACTGAAGCAGGGACACATCATGATGCAGAAATCATCCGAGTGTGAGAACGGGACAGGGCACAGGAGCTCGCCGTCCTGCAGTGAGTGTAGATTACACACTACATCTGGCGTAAacgattttgttttatttgttctttctgGTCCATCAGCGTGGCCATTTTAGCTGTCGATCGTTCTCGGGTCTGCTAGAAACCACCATCcgacattttaaagaaaaagagaaaaacactttgaaagtatttatttgtaaatgtttaaatgcaagCCTTTctctatgtgtttgtgtttatatttaaagctttatacagcattttatttGGCCTCATGCCAGGTCTTGATTTtcgttttaatttttttttttgctttgctatttgaggtttttttttttaaatataaaatgaaaccaTGTACAATTGCCAAGGAAAATCTGAGCTATCTGATCATTAgtatattgtttaatttaaccACGTATGATAGGAAAGTGGAAGAGGACAGTGGAGGCGAGGCAGGGCGAGGCACCTTCAGTTAAACAACTTACTTTGAAGAATTCTAAAAAACTTCTacatttaaaggagcagtttgtaatctTTAGAGCCCCTTTAGCATCTGCAGACATTAAAACTGCTGGTAATACTTCAGTAAAGAGGGtcacatgtaaggaataaaacactccatgttgtgcttttGTAGGAAAATCATCAGTGATGGGATGGAGTGATGAAGCACAGTTACTGTTCCTACCCCAAccttgattagtttcctataacagcacacatcctgaagtgttttattcctcttacaccacagcagtggCAGTGCTAACATCGTTTGTTTAGAAGAACGACATGTCAAacatttttatccgtttatagttacatttactgctgtggaaacaagttcgttcctgttctcacttactttacagcagctataaacagtcattctctcaccagcctctcttttctttaaataaagcttgtca
>XM_026915394.2
agagagagagaggtgtcgCTTTTCATCAGGCACCGTCTGCACAATAAAGAAGGCACAGAAAGTGTGCTGAATTCTgctcagaaagaaagaagaaagaaagaaagaaaggaagaaaaagaaaggatagGTCTATTCAGAGCCCTTCGGAACTGACAAAGACTTGAGGCACTTGAAGCAAACAAAGGAGGAGATCGTACAGTTTCAGGGCAGGACGTGGTAGAAggagggaagaaaagaaaaagaggaggagagaagaaagtTTTCCGAGTTGAAGAGCAGATAGTAGCCGGTCTCTCTGGGCTGGACTGGATGAAAGCAGGCGCCTGGACGCTCGGTTAGATGTGATCACCTTCACCATGCGGAGTGACCCTATTCTGTTCGCCTCCAGGGCAATGGAGGAGCTGGTGGCGGAGCTGCGGGTCTTCTTGGAGCTGTTGGACCGAGAGTATTTGAGcgcagcagtgagagagaagaaacTGCAGATCTCCAACATTCTACACAGAGTCCTGTCTGCTAAAGAATCATCCTATAAGGCCGAGGTCCACAGCTCACTTCCTGCCCCGCCTCAGATGCCCCTCCCAGAGATCCCACATCCATGGCTGCCTCCTGATAACGGACCACCTCCTCTGCCCAGTTCCTCTCTTCCTGAGGGCTACTACGAGGAAGCCGTGCCTCTGGGTCCTGGGAAAGCTCCAGAATACATCACCTCccAGTATGACTCAGACGCCATGAGCAGCTCGTACGAGTCATATgacgaggaagaggaggatgggAAGGGACAGAAGATGCGCCATCAGTGGCCCTCGGAGGAGGCGTCTATGGACTTAGTGAAGGACGCACGCATCTGCGCTTTCCTTCTGCGCAAGAAACGCTTTGGACAGTGGACCAAACTGCTCTGCGTCATCAAAGACAATAAACTCCTCTGCTATAAGTCATCTAAAGACCAGACTCCTCAGATGGAGCTCCTCCTGTCCGGCTGCAGTGTCACTCACATCCCCAAAgacagcaagaagaagaagcacgAGCTGAAGATCGTCCACCAGGGGGCAGACGCTCTGGTGCTCGCTGTACACAGCAAAGAGCAGGCTGAAGAGTGGCTCAAGGTGATGAGAGAGGTGTGTGCTAACGGGACCGGAGCAGTGGACTCTGACGGAGCCGTGTCCGGATCTTCCGTTAACAAAGCCGAGCTGGAAAAGAAGTTGTCCTGTGACAGACCGAGTTCTGATGGAGAGCCCAGTCATGAAAATGGTGTCTCAGATGGAAAAGATCCAGTTAAAGGGAAGAAGAACTCGAAGACTGAACAGAAAGGCACAGTGGGGAAGGTGGCAGGGAAGAAAATCACTAAGATCATCAGCCTGGGGAAGAAGAAGCCGTCCACGGATGAACAGACGTCATCAGCGGAGGAGGACGTCCCGACCAGCGGCTATCTGAACGTGCTTTCCAACAACCGCTGGAGAGAGAGGTGGTGTCGGCTGAAGGATAACCAGCTGTTGCTGCATAAGGACCGGGAGGATCTGAAGACGCACATGGCCTCGCTGCCCCTGCGTGGATGTGAGGTCATCCCCGGGCTCGACTCCAAGCACCCGTTTGCTTTTAGGCTGCTGAGGAACGGACAGGAAGTGGCTGTGCTTGAGgcctCGTCCTCTGAGAGTATGGGTCGGTGGTTGGGGGTGTTACTGGCAGAGACAGGCTCTACGACAGACCCTGCCACTCTACACTATGATTACATAGACGTGGAGACCACCGCAAACGTCATTCAGCTGGCCAAGCAGTCCTTCTGCTTCACCAGTAAGCGAGCCATTTCTCCAAACCCGTACCTGGATAACCCGGTGAACGGTTACGCCCGGCCCTCAGGTGTGGCCCTGCACTATGACGACGTTCCCTGCATTAACGGATCGGTATGGTTTCACACTCATGACCCACAGCTCGGTTCTCTTGAGGCTCACTATGAGAACGCTGAGCTTTATGAGAACATGCCTTCCCCCAAACTGGAGACTCGCTCCTCGTCCAAACTGAGCTGGCCACCATCTTGCTCTGGCCATTACAAAACGCCCGTCTCTTCTTCCTCAGCTTCCTCTTCCTCCGCTGCTAATACTACCTCTCAGATGAAGGGAAAGAAAGCCACGACTGTCAACGGTTTAGCTGCCAAACAGAAGCTGGACAAGAACCAACCCAAAAAGACCAACGGAACCAACGGGTCCGTGCCAGTGAAACGCAACAATTCAAGTGTGGATCAGTATAAATACGGGAAGAACAGAGTGGAAGCGGATGCTAAGAGGCTCCAGGCGAAAGAAGAAGAGCTGATGAAAAGAAAGCAGGAGATTCGTAACCGTCTCACACAGCTGAAGAAAGACAGGAGAGACCTGCGCACGGCCATCGAGAACAGCACCGgtaagcGCTCTCAGGCCTCGCTGACGGAGCGGCTGAAGAAAGTGGAGGACGAGTGTAAGCTGAAAGAGGAGGAGCGAGTGAACTTGGAGCTGGAGCTGACGGAGGTGAAGGAGAGTCTGAAGAAGGCTCTGAGTGGAGGAGTCACTCTCGGACTGACCATCGAACCCAAGACCAGCAGCTCCAGTCCACAGTCTCCGGTGCTGGTCAGGCGTACGGTGGATAACTCGCCCATCTCCAGCTGTGACACCAGCGACACCGAGACCTGCTCACTGCCAGTCAACAGCGCCTCCTTACTGCGACGCCAAGTACCGCAGAAAAACCCTCCAGTACGGGGCCATGTGCTCAGGAAGGCCAAgGAATGGGAGATGAAATCTGGCACGTAAACACTCACTTTCAGCttctttattattgttattattattatttttgttttcctgtttgtatttatttaaatttgcatATAGAAGTGATTGAAAGCAAATCGACTGAAGCAGGGACACATCATGATGCAGAAATCATCCGAGTGTGAGAACGGGACAGGGCACAGGAGCTCGCCGTCCTGCAGTGAGTGTAGATTACACACTACATCTGGCGTAAacgattttgttttatttgttctttctgGTCCATCAGCGTGGCCATTTTAGCTGTCGATCGTTCTCGGGTCTGCTAGAAACCACCATCcgacattttaaagaaaaagagaaaaacactttgaaagtatttatttgtaaatgtttaaatgcaagCCTTTctctatgtgtttgtgtttatatttaaagctttatacagcattttatttGGCCTCATGCCAGGTCTTGATTTtcgttttaatttttttttttgctttgctatttgaggtttttttttttaaatataaaatgaaaccaTGTACAATTGCCAAGGAAAATCTGAGCTATCTGATCATTAgtatattgtttaatttaaccACGTATGATAGGAAAGTGGAAGAGGACAGTGGAGGCGAGGCAGGGCGAGGCACCTTCAGTTAAACAACTTACTTTGAAGAATTCTAAAAAACTTCTacatttaaaggagcagtttgtaatctTTAGAGCCCCTTTAGCATCTGCAGACATTAAAACTGCTGGTAATACTTCAGTAAAGAGGGtcacatgtaaggaataaaacactccatgttgtgcttttGTAGGAAAATCATCAGTGATGGGATGGAGTGATGAAGCACAGTTACTGTTCCTACCCCAAccttgattagtttcctataacagcacacatcctgaagtgttttattcctcttacaccacagcagtggCAGTGCTAACATCGTTTGTTTAGAAGAACGACATGTCAAacatttttatccgtttatagttacatttactgctgtggaaacaagttcgttcctgttctcacttactttacagcagctataaacagtcattctctcaccagcctctcttttctttaaataaagcttgtca
>XM_026915396.2
agagagagaggtgtcgCTTTTCATCAGGCACCGTCTGCACAATAAAGAAGGCACAGAAAGTGTGCTGAATTCTgctcagaaagaaagaagaaagaaagaaagaaaggaagaaaaagaaaggatagGTCTATTCAGAGCCCTTCGGAACTGACAAAGACTTGAGGCACTTGAAGCAAACAAAGGAGGAGATCGTACAGTTTCAGGGCAGGACGTGGTAGAAggagggaagaaaagaaaaagaggaggagagaagaaagtTTTCCGAGTTGAAGAGCAGATAGTAGCCGGTCTCTCTGGGCTGGACTGGATGAAAGCAGGCGCCTGGACGCTCGGTTAGATGTGATCACCTTCACCATGCGGAGTGACCCTATTCTGTTCGCCTCCAGGGCAATGGAGGAGCTGGTGGCGGAGCTGCGGGTCTTCTTGGAGCTGTTGGACCGAGAGTATTTGAGcgcagcagtgagagagaagaaacTGCAGATCTCCAACATTCTACACAGAGTCCTGTCTGCTAAAGAATCATCCTATAAGGCCGAGGTCCACAGCTCACTTCCTGCCCCGCCTCAGATGCCCCTCCCAGAGATCCCACATCCATGGCTGCCTCCTGATAACGGACCACCTCCTCTGCCCAGTTCCTCTCTTCCTGAGGGCTACTACGAGGAAGCCGTGCCTCTGGGTCCTGGGAAAGCTCCAGAATACATCACCTCccAGTATGACTCAGACGCCATGAGCAGCTCGTACGAGTCATATgacgaggaagaggaggatgggAAGGGACAGAAGATGCGCCATCAGTGGCCCTCGGAGGAGGCGTCTATGGACTTAGTGAAGGACGCACGCATCTGCGCTTTCCTTCTGCGCAAGAAACGCTTTGGACAGTGGACCAAACTGCTCTGCGTCATCAAAGACAATAAACTCCTCTGCTATAAGTCATCTAAAGACCAGACTCCTCAGATGGAGCTCCTCCTGTCCGGCTGCAGTGTCACTCACATCCCCAAAgacagcaagaagaagaagcacgAGCTGAAGATCGTCCACCAGGGGGCAGACGCTCTGGTGCTCGCTGTACACAGCAAAGAGCAGGCTGAAGAGTGGCTCAAGGTGATGAGAGAGGTGTGTGCTAACGGGACCGGAGCAGTGGACTCTGACGGAGCCGTGTCCGGATCTTCCGTTAACAAAGCCGAGCTGGAAAAGAAGTTGTCCTGTGACAGACCGAGTTCTGATGGAGAGCCCAGTCATGAAAATGGTGTCTCAGATGGAAAAGATCCAGTTAAAGGGAAGAAGAACTCGAAGACTGAACAGAAAGGCACAGTGGGGAAGGTGGCAGGGAAGAAAATCACTAAGATCATCAGCCTGGGGAAGAAGAAGCCGTCCACGGATGAACAGACGTCATCAGCGGAGGAGGACGTCCCGACCAGCGGCTATCTGAACGTGCTTTCCAACAACCGCTGGAGAGAGAGGTGGTGTCGGCTGAAGGATAACCAGCTGTTGCTGCATAAGGACCGGGAGGATCTGAAGACGCACATGGCCTCGCTGCCCCTGCGTGGATGTGAGGTCATCCCCGGGCTCGACTCCAAGCACCCGTTTGCTTTTAGGCTGCTGAGGAACGGACAGGAAGTGGCTGTGCTTGAGgcctCGTCCTCTGAGAGTATGGGTCGGTGGTTGGGGGTGTTACTGGCAGAGACAGGCTCTACGACAGACCCTGCCACTCTACACTATGATTACATAGACGTGGAGACCACCGCAAACGTCATTCAGCTGGCCAAGCAGTCCTTCTGCTTCACCAGTAAGCGAGCCATTTCTCCAAACCCGTACCTGGATAACCCGGTGAACGGTTACGCCCGGCCCTCAGGTGTGGCCCTGCACTATGACGACGTTCCCTGCATTAACGGATCGGTATGGTTTCACACTCATATGAAGGGAAAGAAAGCCACGACTGTCAACGGTTTAGCTGCCAAACAGAAGCTGGACAAGAACCAACCCAAAAAGACCAACGGAACCAACGGGTCCGTGCCAGTGAAACGCAACAATTCAAGTGTGGATCAGTATAAATACGGGAAGAACAGAGTGGAAGCGGATGCTAAGAGGCTCCAGGCGAAAGAAGAAGAGCTGATGAAAAGAAAGCAGGAGATTCGTAACCGTCTCACACAGCTGAAGAAAGACAGGAGAGACCTGCGCACGGCCATCGAGAACAGCACCGgtaagcGCTCTCAGGCCTCGCTGACGGAGCGGCTGAAGAAAGTGGAGGACGAGTGTAAGCTGAAAGAGGAGGAGCGAGTGAACTTGGAGCTGGAGCTGACGGAGGTGAAGGAGAGTCTGAAGAAGGCTCTGAGTGGAGGAGTCACTCTCGGACTGACCATCGAACCCAAGACCAGCAGCTCCAGTCCACAGTCTCCGGTGCTGGTCAGGCGTACGGTGGATAACTCGCCCATCTCCAGCTGTGACACCAGCGACACCGAGACCTGCTCACTGCCAGTCAACAGCGCCTCCTTACTGCGACGCCAAGTACCGCAGAAAAACCCTCCAGTACGGGGCCATGTGCTCAGGAAGGCCAAgGAATGGGAGATGAAATCTGGCACGTAAACACTCACTTTCAGCttctttattattgttattattattatttttgttttcctgtttgtatttatttaaatttgcatATAGAAGTGATTGAAAGCAAATCGACTGAAGCAGGGACACATCATGATGCAGAAATCATCCGAGTGTGAGAACGGGACAGGGCACAGGAGCTCGCCGTCCTGCAGTGAGTGTAGATTACACACTACATCTGGCGTAAacgattttgttttatttgttctttctgGTCCATCAGCGTGGCCATTTTAGCTGTCGATCGTTCTCGGGTCTGCTAGAAACCACCATCcgacattttaaagaaaaagagaaaaacactttgaaagtatttatttgtaaatgtttaaatgcaagCCTTTctctatgtgtttgtgtttatatttaaagctttatacagcattttatttGGCCTCATGCCAGGTCTTGATTTtcgttttaatttttttttttgctttgctatttgaggtttttttttttaaatataaaatgaaaccaTGTACAATTGCCAAGGAAAATCTGAGCTATCTGATCATTAgtatattgtttaatttaaccACGTATGATAGGAAAGTGGAAGAGGACAGTGGAGGCGAGGCAGGGCGAGGCACCTTCAGTTAAACAACTTACTTTGAAGAATTCTAAAAAACTTCTacatttaaaggagcagtttgtaatctTTAGAGCCCCTTTAGCATCTGCAGACATTAAAACTGCTGGTAATACTTCAGTAAAGAGGGtcacatgtaaggaataaaacactccatgttgtgcttttGTAGGAAAATCATCAGTGATGGGATGGAGTGATGAAGCACAGTTACTGTTCCTACCCCAAccttgattagtttcctataacagcacacatcctgaagtgttttattcctcttacaccacagcagtggCAGTGCTAACATCGTTTGTTTAGAAGAACGACATGTCAAacatttttatccgtttatagttacatttactgctgtggaaacaagttcgttcctgttctcacttactttacagcagctataaacagtcattctctcaccagcctctcttttctttaaataaagcttgtc
>XM_026915397.2
agagagagaggtgtcgCTTTTCATCAGGCACCGTCTGCACAATAAAGAAGGCACAGAAAGTGTGCTGAATTCTgctcagaaagaaagaagaaagaaagaaagaaaggaagaaaaagaaaggatagGTCTATTCAGAGCCCTTCGGAACTGACAAAGACTTGAGGCACTTGAAGCAAACAAAGGAGGAGATCGTACAGTTTCAGGGCAGGACGTGGTAGAAggagggaagaaaagaaaaagaggaggagagaagaaagtTTTCCGAGTTGAAGAGCAGATAGTAGCCGGTCTCTCTGGGCTGGACTGGATGAAAGCAGGCGCCTGGACGCTCGGTTAGATGTGATCACCTTCACCATGCGGAGTGACCCTATTCTGTTCGCCTCCAGGGCAATGGAGGAGCTGGTGGCGGAGCTGCGGGTCTTCTTGGAGCTGTTGGACCGAGAGTATTTGAGcgcagcagtgagagagaagaaacTGCAGATCTCCAACATTCTACACAGAGTCCTGTCTGCTAAAGAATCATCCTATAAGGCCGAGGTCCACAGCTCACTTCCTGCCCCGCCTCAGATGCCCCTCCCAGAGATCCCACATCCATGGCTGCCTCCTGATAACGGACCACCTCCTCTGCCCAGTTCCTCTCTTCCTGAGGGCTACTACGAGGAAGCCGTGCCTCTGGGTCCTGGGAAAGCTCCAGAATACATCACCTCccAGTATGACTCAGACGCCATGAGCAGCTCGTACGAGTCATATgacgaggaagaggaggatgggAAGGGACAGAAGATGCGCCATCAGTGGCCCTCGGAGGAGGCGTCTATGGACTTAGTGAAGGACGCACGCATCTGCGCTTTCCTTCTGCGCAAGAAACGCTTTGGACAGTGGACCAAACTGCTCTGCGTCATCAAAGACAATAAACTCCTCTGCTATAAGTCATCTAAAGACCAGACTCCTCAGATGGAGCTCCTCCTGTCCGGCTGCAGTGTCACTCACATCCCCAAAgacagcaagaagaagaagcacgAGCTGAAGATCGTCCACCAGGGGGCAGACGCTCTGGTGCTCGCTGTACACAGCAAAGAGCAGGCTGAAGAGTGGCTCAAGGTGATGAGAGAGGTGTGTGCTAACGGGACCGGAGCAGTGGACTCTGACGGAGCCGTGTCCGGATCTTCCGTTAACAAAGCCGAGCTGGAAAAGAAGTTGTCCTGTGACAGACCGAGTTCTGATGGAGAGCCCAGTCATGAAAATGGTGTCTCAGATGGAAAAGATCCAGTTAAAGGGAAGAAGAACTCGAAGACTGAACAGAAAGGCACAGTGGGGAAGGTGGCAGGGAAGAAAATCACTAAGATCATCAGCCTGGGGAAGAAGAAGCCGTCCACGGATGAACAGACGTCATCAGCGGAGGAGGACGTCCCGACCAGCGGCTATCTGAACGTGCTTTCCAACAACCGCTGGAGAGAGAGGTGGTGTCGGCTGAAGGATAACCAGCTGTTGCTGCATAAGGACCGGGAGGATCTGAAGACGCACATGGCCTCGCTGCCCCTGCGTGGATGTGAGGTCATCCCCGGGCTCGACTCCAAGCACCCGTTTGCTTTTAGGCTGCTGAGGAACGGACAGGAAGTGGCTGTGCTTGAGgcctCGTCCTCTGAGAGTATGGGTCGGTGGTTGGGGGTGTTACTGGCAGAGACAGGCTCTACGACAGACCCTGCCACTCTACACTATGATTACATAGACGTGGAGACCACCGCAAACGTCATTCAGCTGGCCAAGCAGTCCTTCTGCTTCACCAGTAAGCGAGCCATTTCTCCAAACCCGTACCTGGATAACCCGGTGAACGGTTACGCCCGGCCCTCAGGTGTGGCCCTGCACTATGACGACGTTCCCTGCATTAACGGATCGATGAAGGGAAAGAAAGCCACGACTGTCAACGGTTTAGCTGCCAAACAGAAGCTGGACAAGAACCAACCCAAAAAGACCAACGGAACCAACGGGTCCGTGCCAGTGAAACGCAACAATTCAAGTGTGGATCAGTATAAATACGGGAAGAACAGAGTGGAAGCGGATGCTAAGAGGCTCCAGGCGAAAGAAGAAGAGCTGATGAAAAGAAAGCAGGAGATTCGTAACCGTCTCACACAGCTGAAGAAAGACAGGAGAGACCTGCGCACGGCCATCGAGAACAGCACCGgtaagcGCTCTCAGGCCTCGCTGACGGAGCGGCTGAAGAAAGTGGAGGACGAGTGTAAGCTGAAAGAGGAGGAGCGAGTGAACTTGGAGCTGGAGCTGACGGAGGTGAAGGAGAGTCTGAAGAAGGCTCTGAGTGGAGGAGTCACTCTCGGACTGACCATCGAACCCAAGACCAGCAGCTCCAGTCCACAGTCTCCGGTGCTGGTCAGGCGTACGGTGGATAACTCGCCCATCTCCAGCTGTGACACCAGCGACACCGAGACCTGCTCACTGCCAGTCAACAGCGCCTCCTTACTGCGACGCCAAGTACCGCAGAAAAACCCTCCAGTACGGGGCCATGTGCTCAGGAAGGCCAAgGAATGGGAGATGAAATCTGGCACGTAAACACTCACTTTCAGCttctttattattgttattattattatttttgttttcctgtttgtatttatttaaatttgcatATAGAAGTGATTGAAAGCAAATCGACTGAAGCAGGGACACATCATGATGCAGAAATCATCCGAGTGTGAGAACGGGACAGGGCACAGGAGCTCGCCGTCCTGCAGTGAGTGTAGATTACACACTACATCTGGCGTAAacgattttgttttatttgttctttctgGTCCATCAGCGTGGCCATTTTAGCTGTCGATCGTTCTCGGGTCTGCTAGAAACCACCATCcgacattttaaagaaaaagagaaaaacactttgaaagtatttatttgtaaatgtttaaatgcaagCCTTTctctatgtgtttgtgtttatatttaaagctttatacagcattttatttGGCCTCATGCCAGGTCTTGATTTtcgttttaatttttttttttgctttgctatttgaggtttttttttttaaatataaaatgaaaccaTGTACAATTGCCAAGGAAAATCTGAGCTATCTGATCATTAgtatattgtttaatttaaccACGTATGATAGGAAAGTGGAAGAGGACAGTGGAGGCGAGGCAGGGCGAGGCACCTTCAGTTAAACAACTTACTTTGAAGAATTCTAAAAAACTTCTacatttaaaggagcagtttgtaatctTTAGAGCCCCTTTAGCATCTGCAGACATTAAAACTGCTGGTAATACTTCAGTAAAGAGGGtcacatgtaaggaataaaacactccatgttgtgcttttGTAGGAAAATCATCAGTGATGGGATGGAGTGATGAAGCACAGTTACTGTTCCTACCCCAAccttgattagtttcctataacagcacacatcctgaagtgttttattcctcttacaccacagcagtggCAGTGCTAACATCGTTTGTTTAGAAGAACGACATGTCAAacatttttatccgtttatagttacatttactgctgtggaaacaagttcgttcctgttctcacttactttacagcagctataaacagtcattctctcaccagcctctcttttctttaaataaagcttgt
>XM_034309456.1
AATGTGTAAGTGAGCGCAGAGAAGCAGTGGAGCTGCAGCCGCtttcctctcatcctctctctggGCTTTAAAATCCCGGAATAAAACAACACCATGACGGGACACAGCGCTAAAGCAATGGAGGAGCTGGTGGCGGAGCTGCGGGTCTTCTTGGAGCTGTTGGACCGAGAGTATTTGAGcgcagcagtgagagagaagaaacTGCAGATCTCCAACATTCTACACAGAGTCCTGTCTGCTAAAGAATCATCCTATAAGGCCGAGGTCCACAGCTCACTTCCTGCCCCGCCTCAGATGCCCCTCCCAGAGATCCCACATCCATGGCTGCCTCCTGATAACGGACCACCTCCTCTGCCCAGTTCCTCTCTTCCTGAGGGCTACTACGAGGAAGCCGTGCCTCTGGGTCCTGGGAAAGCTCCAGAATACATCACCTCccAGTATGACTCAGACGCCATGAGCAGCTCGTACGAGTCATATgacgaggaagaggaggatgggAAGGGACAGAAGATGCGCCATCAGTGGCCCTCGGAGGAGGCGTCTATGGACTTAGTGAAGGACGCACGCATCTGCGCTTTCCTTCTGCGCAAGAAACGCTTTGGACAGTGGACCAAACTGCTCTGCGTCATCAAAGACAATAAACTCCTCTGCTATAAGTCATCTAAAGACCAGACTCCTCAGATGGAGCTCCTCCTGTCCGGCTGCAGTGTCACTCACATCCCCAAAgacagcaagaagaagaagcacgAGCTGAAGATCGTCCACCAGGGGGCAGACGCTCTGGTGCTCGCTGTACACAGCAAAGAGCAGGCTGAAGAGTGGCTCAAGGTGATGAGAGAGGTGTGTGCTAACGGGACCGGAGCAGTGGACTCTGACGGAGCCGTGTCCGGATCTTCCGTTAACAAAGCCGAGCTGGAAAAGAAGTTGTCCTGTGACAGACCGAGTTCTGATGGAGAGCCCAGTCATGAAAATGGTGTCTCAGATGGAAAAGATCCAGTTAAAGGGAAGAAGAACTCGAAGACTGAACAGAAAGGCACAGTGGGGAAGGTGGCAGGGAAGAAAATCACTAAGATCATCAGCCTGGGGAAGAAGAAGCCGTCCACGGATGAACAGACGTCATCAGCGGAGGAGGACGTCCCGACCAGCGGCTATCTGAACGTGCTTTCCAACAACCGCTGGAGAGAGAGGTGGTGTCGGCTGAAGGATAACCAGCTGTTGCTGCATAAGGACCGGGAGGATCTGAAGACGCACATGGCCTCGCTGCCCCTGCGTGGATGTGAGGTCATCCCCGGGCTCGACTCCAAGCACCCGTTTGCTTTTAGGCTGCTGAGGAACGGACAGGAAGTGGCTGTGCTTGAGgcctCGTCCTCTGAGAGTATGGGTCGGTGGTTGGGGGTGTTACTGGCAGAGACAGGCTCTACGACAGACCCTGCCACTCTACACTATGATTACATAGACGTGGAGACCACCGCAAACGTCATTCAGCTGGCCAAGCAGTCCTTCTGCTTCACCAGTAAGCGAGCCATTTCTCCAAACCCGTACCTGGATAACCCGGTGAACGGTTACGCCCGGCCCTCAGGTGTGGCCCTGCACTATGACGACGTTCCCTGCATTAACGGATCGGTATGGTTTCACACTCATAAGGACCCACAGCTCGGTTCTCTTGAGGCTCACTATGAGAACGCTGAGCTTTATGAGAACATGCCTTCCCCCAAACTGGAGACTCGCTCCTCGTCCAAACTGAGCTGGCCACCATCTTGCTCTGGCCATTACAAAACGCCCGTCTCTTCTTCCTCAGCTTCCTCTTCCTCCGCTGCTAATACTACCTCTCAGATGAAGGGAAAGAAAGCCACGACTGTCAACGGTTTAGCTGCCAAACAGAAGCTGGACAAGAACCAACCCAAAAAGACCAACGGAACCAACGGGTCCGTGCCAGTGAAACGCAACAATTCAAGTGTGGATCAGTATAAATACGGGAAGAACAGAGTGGAAGCGGATGCTAAGAGGCTCCAGGCGAAAGAAGAAGAGCTGATGAAAAGAAAGCAGGAGATTCGTAACCGTCTCACACAGCTGAAGAAAGACAGGAGAGACCTGCGCACGGCCATCGAGAACAGCACCGgtaagcGCTCTCAGGCCTCGCTGACGGAGCGGCTGAAGAAAGTGGAGGACGAGTGTAAGCTGAAAGAGGAGGAGCGAGTGAACTTGGAGCTGGAGCTGACGGAGGTGAAGGAGAGTCTGAAGAAGGCTCTGAGTGGAGGAGTCACTCTCGGACTGACCATCGAACCCAAGACCAGCAGCTCCAGTCCACAGTCTCCGGTGCTGGTCAGGCGTACGGTGGATAACTCGCCCATCTCCAGCTGTGACACCAGCGACACCGAGACCTGCTCACTGCCAGTCAACAGCGCCTCCTTACTGCGACGCCAAGTACCGCAGAAAAACCCTCCAGTACGGGGCCATGTGCTCAGGAAGGCCAAgGAATGGGAGATGAAATCTGGCACGTAAACACTCACTTTCAGCttctttattattgttattattattatttttgttttcctgtttgtatttatttaaatttgcatATAGAAGTGATTGAAAGCAAATCGACTGAAGCAGGGACACATCATGATGCAGAAATCATCCGAGTGTGAGAACGGGACAGGGCACAGGAGCTCGCCGTCCTGCAGTGAGTGTAGATTACACACTACATCTGGCGTAAacgattttgttttatttgttctttctgGTCCATCAGCGTGGCCATTTTAGCTGTCGATCGTTCTCGGGTCTGCTAGAAACCACCATCcgacattttaaagaaaaagagaaaaacactttgaaagtatttatttgtaaatgtttaaatgcaagCCTTTctctatgtgtttgtgtttatatttaaagctttatacagcattttatttGGCCTCATGCCAGGTCTTGATTTtcgttttaatttttttttttgctttgctatttgaggtttttttttttaaatataaaatgaaaccaTGTACAATTGCCAAGGAAAATCTGAGCTATCTGATCATTAgtatattgtttaatttaaccACGTATGATAGGAAAGTGGAAGAGGACAGTGGAGGCGAGGCAGGGCGAGGCACCTTCAGTTAAACAACTTACTTTGAAGAATTCTAAAAAACTTCTacatttaaaggagcagtttgtaatctTTAGAGCCCCTTTAGCATCTGCAGACATTAAAACTGCTGGTAATACTTCAGTAAAGAGGGtcacatgtaaggaataaaacactccatgttgtgcttttGTAGGAAAATCATCAGTGATGGGATGGAGTGATGAAGCACAGTTACTGTTCCTACCCCAAccttgattagtttcctataacagcacacatcctgaagtgttttattcctcttacaccacagcagtggCAGTGCTAACATCGTTTGTTTAGAAGAACGACATGTCAAacatttttatccgtttatagttacatttactgctgtggaaacaagttcgttcctgttctcacttactttacagcagctataaacagtcattctctcaccagcctctcttttctttaaataaagcttgtca

Function

symbol description
afap1 Predicted to act upstream of or within regulation of cytoskeleton organization and regulation of signal transduction. Is expressed in brain. Human ortholog(s) of this gene implicated in open-angle glaucoma. Orthologous to human AFAP1 (actin filament associated protein 1).

NR:

description
actin filament-associated protein 1 isoform X1

GO: NA

KEGG:

id description
K18616 AFAP1; actin filament associated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU238120 False 1540 lncRNA 0.37 2 23642406 23688417
XM_026915393.2 True 3860 mRNA 0.49 18 23632653 23687101
XM_026915394.2 False 3857 mRNA 0.49 18 23632653 23687101
XM_026915396.2 False 3665 mRNA 0.49 17 23632655 23687100
XM_026915397.2 False 3646 mRNA 0.49 17 23632655 23687099
XM_034309456.1 False 3585 mRNA 0.49 18 23604837 23687101

Neighbor

gene id symbol gene type direction distance location
ablim2 ablim2 coding upstream 4705 23541024 ~ 23600132 (+)
si:dkey-219e21.4 LOC108273735 coding upstream 132608 23466357 ~ 23472229 (+)
mfsd8 mfsd8 coding upstream 145332 23447143 ~ 23459505 (+)
si:dkey-219e21.2 LOC108273732 coding upstream 168112 23426875 ~ 23436725 (+)
capgb capg,capgb,LOC107556576,LOC107665882,LOC107657288,LOC107733451,LOC108430072 coding upstream 184773 23402183 ~ 23420064 (+)
uros uros coding downstream 359146 24047563 ~ 24064984 (+)
mmp21 mmp21 coding downstream 379122 24067539 ~ 24080612 (+)
ctbp2l ctbp2,LOC105926449,LOC107387783,LOC106955101,LOC103481571 coding downstream 444489 24132906 ~ 24235084 (+)
hpdl hpdl coding downstream 578861 24267278 ~ 24273823 (+)
fam53b fam53b coding downstream 596664 24285081 ~ 24323614 (+)
G201240 NA non-coding upstream 144382 23460002 ~ 23460455 (+)
G201234 NA non-coding upstream 223847 23375074 ~ 23380990 (+)
G201186 NA non-coding upstream 335418 23268627 ~ 23269419 (+)
G201077 NA non-coding upstream 498929 23104676 ~ 23105908 (+)
G201093 NA non-coding upstream 501338 23103284 ~ 23103499 (+)
G201281 NA non-coding downstream 12302 23700719 ~ 23729010 (+)
G201284 NA non-coding downstream 30630 23719047 ~ 23722939 (+)
G201297 NA non-coding downstream 49940 23738357 ~ 23740340 (+)
G201600 NA non-coding downstream 74648 23763065 ~ 23763266 (+)
G201604 NA non-coding downstream 86964 23775381 ~ 23860976 (+)
polr2a polr2a,LOC107733452,LOC107584383 other upstream 206174 23272574 ~ 23398663 (+)
G201214 NA other upstream 275266 23324073 ~ 23329571 (+)
LOC117595720 LOC107714409 other upstream 286683 23311260 ~ 23318154 (+)
G201154 NA other upstream 398458 23205666 ~ 23206379 (+)
mrpl27 mrpl27,LOC107665862,LOC108430158 other upstream 733553 22798142 ~ 22871284 (+)
G201962 NA other downstream 693370 24381787 ~ 24382287 (+)
LOC113527444 chst15 other downstream 767242 24455659 ~ 24506076 (+)
LOC113527710 hmx3 other downstream 972627 24661044 ~ 24666608 (+)
dupd1 comtd1,cmtd1,LOC108273857 other downstream 1640792 25329209 ~ 25428112 (+)
G202397 LOC108273443 other downstream 1809298 25497715 ~ 25498919 (+)

Expression


Co-expression Network