hexim1 (LOC108273817)


Basic Information

Item Value
gene id hexim1
gene name LOC108273817
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 9691780 ~ 9695274 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914497.2
CTCGTCTCCGTAGCAGAAGCGAAAAGGAGTTTACAAGGGTTGGAAATGTACTCGGTCCTGTCAAGAAAGCTAGCTAGTTGTAAACGGAGCGGAAGGAGTTAACATTAACAGTCTCAAGTAGCGTAATAATTAAAACGATAGACTTGAGGTAAACGGTGGGAGTGTACAGTTATGGAGCTGAGTAAAGACGACGCTGCGCCGGAGGCTGAAGACAGGGGGCGCCAGAGAGACGACACGCAGAGTGTCATCGCGGAGAAACAAGTGCAGCGAAATCCGCCGGAGTTCTGTCCCGGACTTGTCTCCGGAGACACGCACCCCATGTGCCGCGCTCGGGAGAGGAGCGATCCGGAGCCTAAGACTGGCGATGCTGCCGGTGACGACGGAGACGCGACTGAGAAGACGTCCAGTAAAGCGCAGGGCGAGCGGGACCCCCGGAATAAGAGGAGGTCCGGCTGCAGTTCCGAGGGCGCACCGGACGGCCGCCAAGGCAAGAAGAAACACCGGCGGCGACCGTCCAAGAAGAAGCGACGCTGGAAGCCGTACTTCAAACTGACCtgggaggagaagaaggaacTGGACGAGCGGGAGAGCGCGCGCGCGTCGCGGGTCCGAGCCGAGATGTTCGCTAAAGGTCTGCCGGTGGCTCCGTACAACACCACTCAGTTCCTGATGGAGGAGCACGACCGAGAGGAGCCCGACCTGAACACGGAGCGCTGCAACCGCAGGTCTTTCGGTGCGAGTCGGTCCGAAGACACGGCCAGCGAGGAAGACTACTTCGAGCccgatgaggaggaggaagaggaaggtgAAGGCGGAGAAGGCGGCGAGAGCGACGGTATGGGCCGAGCTGGGGGCGCAGGGGGAGAGTTTCTGCAGCGGGACTTTTCCGAGACCTACGAGCGGTACCACGTAGAGACGCTGCAGAATATGTCCAAACAGGAACTGGTGAGGGAGTACCTGGAGCTGGAGAAGAGCATGTCGCGCCTGGAGGAGGAGAACAACTGGTTGCGGCGCGCGCGGAGAAACCCGGCGACTCCGGGCGAGAGCGCGCAGCGCGTGCACGAGCTGGAGCGCGAGCTGGAGAGACTGAGAGCGCTGAACAGCGAGCTGCTCTTTCACTGCCACCACACTGCGGGACACGCCGTCAACGGATCTGCCGCCTCAGAGCCCGACAAGGGACACGCCGAGGACACGGACACTCAGTGACCGACAGACGCGCTGGACAATTCGACAtgtttccttgtttttctttctttttgtttgtttgcgaTTTATTGTCCTCTGATCTTATCCGTTGTCTTACTGTAAAGCTACGGTAGCTAATGTGATGCGCTTTCGACCCGAAAGGTAACGTTCTTCTTTTTCTGACAAGTTTTAAatattgaatgtgtgtgtgaggtcccATAAAAATGGTCAGTTAGTTGTAATGTAGGTTAgggttgttttggttttttttgcacacGTGACtgaagttataaaaaaaaaaaaaaagactattttGGTTTTAGAGTTAATACTTCTGGATCAGTTACGTGTTCATACTGCACGggagaacaacacacactcatacacacgtTTGTAAGTTTACCGTAAAGCGACGTGTTTTTTCTCCATCAGTCCCAGTAAATGAGCTGTTTGGTATTTTTCTGCTGGTGCACCTGATATTCTGCTATACACTTATTAATGCATGACCAAGGCAGTATGTGGGCTAATAAAACTGTGGAAAACCGTTACTGGCATTTGTTTTCGTCCAAATatatcaattaaattattttaaaaaagcagttgTGGGTTTATTTCATATCTTATCATTAACACTTTGTTTGAGATGGACTTGCAGGACAAGGCTCTGAGCGCTCAGAGTTTAATAACACACTGGTCACATCCCAATCCGCTATTTCTGTGCATAACAGAAAAAACCCCACAAGAGCGCACTGTGGCCTCTCACAGATTTGACACAGGCCTACTAGTTAGTGCAGGAGTATGCAGGGTTTATATGTAGCCTACTCTACTCTGCCTTATCTTGTCTCATGGTAACATGAATCCCCTTCATCATCATATTTAATCTGACGCAGAAATGTTTCCTTCTGTTTCTCGcttccttttctgtctctcttatttattaatgcatgtCATGTTTGCAGAATGTGTTGGAAAGCGCTCTGTAATAGAAGATAAAATTGTGCTTTAGGATTCCAGTGATTTGGAGAAAAGTGCAGTCATCACAATGTATGACATTTGAATATTATTTGCATCTGCGTCCGTTTCTCTGccttcactctttctttcatctGATCTTATCTAATAAAGTACATCCACCTCA
>XM_026914499.2
GTCTCCGTAGCAGAAGCGAAAAGGAGTTTACAAGGGTTGGAAATGTACTCGGTCCTGTCAAGAAAGCTAGCTAGTTGTAAACGGAGCGGAAGGAGTTAACATTAACAGTCTCAAGTAGCGTAATAATTAAAACGATAGACTTGAGGTGGGAGTGTACAGTTATGGAGCTGAGTAAAGACGACGCTGCGCCGGAGGCTGAAGACAGGGGGCGCCAGAGAGACGACACGCAGAGTGTCATCGCGGAGAAACAAGTGCAGCGAAATCCGCCGGAGTTCTGTCCCGGACTTGTCTCCGGAGACACGCACCCCATGTGCCGCGCTCGGGAGAGGAGCGATCCGGAGCCTAAGACTGGCGATGCTGCCGGTGACGACGGAGACGCGACTGAGAAGACGTCCAGTAAAGCGCAGGGCGAGCGGGACCCCCGGAATAAGAGGAGGTCCGGCTGCAGTTCCGAGGGCGCACCGGACGGCCGCCAAGGCAAGAAGAAACACCGGCGGCGACCGTCCAAGAAGAAGCGACGCTGGAAGCCGTACTTCAAACTGACCtgggaggagaagaaggaacTGGACGAGCGGGAGAGCGCGCGCGCGTCGCGGGTCCGAGCCGAGATGTTCGCTAAAGGTCTGCCGGTGGCTCCGTACAACACCACTCAGTTCCTGATGGAGGAGCACGACCGAGAGGAGCCCGACCTGAACACGGAGCGCTGCAACCGCAGGTCTTTCGGTGCGAGTCGGTCCGAAGACACGGCCAGCGAGGAAGACTACTTCGAGCccgatgaggaggaggaagaggaaggtgAAGGCGGAGAAGGCGGCGAGAGCGACGGTATGGGCCGAGCTGGGGGCGCAGGGGGAGAGTTTCTGCAGCGGGACTTTTCCGAGACCTACGAGCGGTACCACGTAGAGACGCTGCAGAATATGTCCAAACAGGAACTGGTGAGGGAGTACCTGGAGCTGGAGAAGAGCATGTCGCGCCTGGAGGAGGAGAACAACTGGTTGCGGCGCGCGCGGAGAAACCCGGCGACTCCGGGCGAGAGCGCGCAGCGCGTGCACGAGCTGGAGCGCGAGCTGGAGAGACTGAGAGCGCTGAACAGCGAGCTGCTCTTTCACTGCCACCACACTGCGGGACACGCCGTCAACGGATCTGCCGCCTCAGAGCCCGACAAGGGACACGCCGAGGACACGGACACTCAGTGACCGACAGACGCGCTGGACAATTCGACAtgtttccttgtttttctttctttttgtttgtttgcgaTTTATTGTCCTCTGATCTTATCCGTTGTCTTACTGTAAAGCTACGGTAGCTAATGTGATGCGCTTTCGACCCGAAAGGTAACGTTCTTCTTTTTCTGACAAGTTTTAAatattgaatgtgtgtgtgaggtcccATAAAAATGGTCAGTTAGTTGTAATGTAGGTTAgggttgttttggttttttttgcacacGTGACtgaagttataaaaaaaaaaaaaaagactattttGGTTTTAGAGTTAATACTTCTGGATCAGTTACGTGTTCATACTGCACGggagaacaacacacactcatacacacgtTTGTAAGTTTACCGTAAAGCGACGTGTTTTTTCTCCATCAGTCCCAGTAAATGAGCTGTTTGGTATTTTTCTGCTGGTGCACCTGATATTCTGCTATACACTTATTAATGCATGACCAAGGCAGTATGTGGGCTAATAAAACTGTGGAAAACCGTTACTGGCATTTGTTTTCGTCCAAATatatcaattaaattattttaaaaaagcagttgTGGGTTTATTTCATATCTTATCATTAACACTTTGTTTGAGATGGACTTGCAGGACAAGGCTCTGAGCGCTCAGAGTTTAATAACACACTGGTCACATCCCAATCCGCTATTTCTGTGCATAACAGAAAAAACCCCACAAGAGCGCACTGTGGCCTCTCACAGATTTGACACAGGCCTACTAGTTAGTGCAGGAGTATGCAGGGTTTATATGTAGCCTACTCTACTCTGCCTTATCTTGTCTCATGGTAACATGAATCCCCTTCATCATCATATTTAATCTGACGCAGAAATGTTTCCTTCTGTTTCTCGcttccttttctgtctctcttatttattaatgcatgtCATGTTTGCAGAATGTGTTGGAAAGCGCTCTGTAATAGAAGATAAAATTGTGCTTTAGGATTCCAGTGATTTGGAGAAAAGTGCAGTCATCACAATGTATGACATTTGAATATTATTTGCATCTGCGTCCGTTTCTCTGccttcactctttctttcatctGATCTTATCTAATAAAGTACATCCACCTCA
>XM_034309652.1
GGCTGGTGAATACTGGAAGACTTCTTTTTGTTCATGTGGGAGACGCAccaaactgcattttatttacattgttcTTAAATAAACATACTCTTTCAGTGTTGGCAATCTTTGCACTACTTGGTAAAGCCCCGTTtatgtagctagctaggttagctAAACACTGACTAGCTAGCAGGCAAACAGAAAAGCTAACACTCCGCATTCTCTCCTCATATTCACGGAAGATACTTTCGATGTCTTTGAAAAGACGCTTATTAAACGTTGGTTCGTTTTTGTAGAGAAATAACGTCACACTTCGACGTATAAAAGCAACTTGGCCGTGAAAATTTGCGTATTCGTTAACTCGACGAACACACGTTACCAGACACTCAATGGCTAAGCACTGCTGTGAATAACGACTACTTTGTGGATGAAGAGCCTTTAATCACGTCCGAGGCGCGAGGTGGGAGTGTACAGTTATGGAGCTGAGTAAAGACGACGCTGCGCCGGAGGCTGAAGACAGGGGGCGCCAGAGAGACGACACGCAGAGTGTCATCGCGGAGAAACAAGTGCAGCGAAATCCGCCGGAGTTCTGTCCCGGACTTGTCTCCGGAGACACGCACCCCATGTGCCGCGCTCGGGAGAGGAGCGATCCGGAGCCTAAGACTGGCGATGCTGCCGGTGACGACGGAGACGCGACTGAGAAGACGTCCAGTAAAGCGCAGGGCGAGCGGGACCCCCGGAATAAGAGGAGGTCCGGCTGCAGTTCCGAGGGCGCACCGGACGGCCGCCAAGGCAAGAAGAAACACCGGCGGCGACCGTCCAAGAAGAAGCGACGCTGGAAGCCGTACTTCAAACTGACCtgggaggagaagaaggaacTGGACGAGCGGGAGAGCGCGCGCGCGTCGCGGGTCCGAGCCGAGATGTTCGCTAAAGGTCTGCCGGTGGCTCCGTACAACACCACTCAGTTCCTGATGGAGGAGCACGACCGAGAGGAGCCCGACCTGAACACGGAGCGCTGCAACCGCAGGTCTTTCGGTGCGAGTCGGTCCGAAGACACGGCCAGCGAGGAAGACTACTTCGAGCccgatgaggaggaggaagaggaaggtgAAGGCGGAGAAGGCGGCGAGAGCGACGGTATGGGCCGAGCTGGGGGCGCAGGGGGAGAGTTTCTGCAGCGGGACTTTTCCGAGACCTACGAGCGGTACCACGTAGAGACGCTGCAGAATATGTCCAAACAGGAACTGGTGAGGGAGTACCTGGAGCTGGAGAAGAGCATGTCGCGCCTGGAGGAGGAGAACAACTGGTTGCGGCGCGCGCGGAGAAACCCGGCGACTCCGGGCGAGAGCGCGCAGCGCGTGCACGAGCTGGAGCGCGAGCTGGAGAGACTGAGAGCGCTGAACAGCGAGCTGCTCTTTCACTGCCACCACACTGCGGGACACGCCGTCAACGGATCTGCCGCCTCAGAGCCCGACAAGGGACACGCCGAGGACACGGACACTCAGTGACCGACAGACGCGCTGGACAATTCGACAtgtttccttgtttttctttctttttgtttgtttgcgaTTTATTGTCCTCTGATCTTATCCGTTGTCTTACTGTAAAGCTACGGTAGCTAATGTGATGCGCTTTCGACCCGAAAGGTAACGTTCTTCTTTTTCTGACAAGTTTTAAatattgaatgtgtgtgtgaggtcccATAAAAATGGTCAGTTAGTTGTAATGTAGGTTAgggttgttttggttttttttgcacacGTGACtgaagttataaaaaaaaaaaaaaagactattttGGTTTTAGAGTTAATACTTCTGGATCAGTTACGTGTTCATACTGCACGggagaacaacacacactcatacacacgtTTGTAAGTTTACCGTAAAGCGACGTGTTTTTTCTCCATCAGTCCCAGTAAATGAGCTGTTTGGTATTTTTCTGCTGGTGCACCTGATATTCTGCTATACACTTATTAATGCATGACCAAGGCAGTATGTGGGCTAATAAAACTGTGGAAAACCGTTACTGGCATTTGTTTTCGTCCAAATatatcaattaaattattttaaaaaagcagttgTGGGTTTATTTCATATCTTATCATTAACACTTTGTTTGAGATGGACTTGCAGGACAAGGCTCTGAGCGCTCAGAGTTTAATAACACACTGGTCACATCCCAATCCGCTATTTCTGTGCATAACAGAAAAAACCCCACAAGAGCGCACTGTGGCCTCTCACAGATTTGACACAGGCCTACTAGTTAGTGCAGGAGTATGCAGGGTTTATATGTAGCCTACTCTACTCTGCCTTATCTTGTCTCATGGTAACATGAATCCCCTTCATCATCATATTTAATCTGACGCAGAAATGTTTCCTTCTGTTTCTCGcttccttttctgtctctcttatttattaatgcatgtCATGTTTGCAGAATGTGTTGGAAAGCGCTCTGTAATAGAAGATAAAATTGTGCTTTAGGATTCCAGTGATTTGGAGAAAAGTGCAGTCATCACAATGTATGACATTTGAATATTATTTGCATCTGCGTCCGTTTCTCTGccttcactctttctttcatctGATCTTATCTAATAAAGTACATCCACCTCA

Function

NR:

description
PREDICTED: protein HEXIM-like

GO:

id name namespace
GO:0000122 negative regulation of transcription by RNA polymerase II biological_process
GO:0043086 negative regulation of catalytic activity biological_process
GO:0045859 regulation of protein kinase activity biological_process
GO:0042326 negative regulation of phosphorylation biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0017069 snRNA binding molecular_function
GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914497.2 False 2323 mRNA 0.50 2 9691780 9694345
XM_026914499.2 False 2313 mRNA 0.50 2 9691780 9694342
XM_034309652.1 True 2610 mRNA 0.49 2 9691780 9695274

Neighbor

gene id symbol gene type direction distance location
LOC113527303 LOC108274029,LOC108424886 coding downstream 38773 9643040 ~ 9653007 (-)
trnac-gca_15 NA coding downstream 63293 9628416 ~ 9628487 (-)
LOC113527284 LOC108424836 coding downstream 95377 9594786 ~ 9596403 (-)
si:ch1073-357b18.4 LOC108273401 coding downstream 170968 9517209 ~ 9520812 (-)
wdr45b wdr45b,LOC107598578 coding downstream 182487 9500260 ~ 9509293 (-)
acbd4 acbd4,LOC107662569 coding upstream 692 9695966 ~ 9705363 (-)
kcnj19b si:dkey-100n10.2,LOC108273498,LOC108424892,LOC107758432,LOC107584158,LOC107661094,LOC107727700,LOC107592353 coding upstream 130164 9825438 ~ 9838465 (-)
hectd2 hectd2,LOC107584154,LOC107758436,LOC107594154,LOC107753452 coding upstream 233048 9928322 ~ 9949802 (-)
rpp30 rpp30 coding upstream 314370 10009644 ~ 10014434 (-)
LOC113527283 htr7 coding upstream 340301 10035575 ~ 10038093 (-)
G193567 NA non-coding downstream 22848 9630682 ~ 9668932 (-)
G193476 NA non-coding downstream 155168 9535459 ~ 9536612 (-)
G193474 NA non-coding downstream 157756 9533729 ~ 9534024 (-)
G193453 NA non-coding downstream 181841 9509733 ~ 9509939 (-)
G193447 NA non-coding downstream 215796 9475084 ~ 9475984 (-)
G193731 NA non-coding upstream 128798 9824072 ~ 9825207 (-)
LOC117598498 NA non-coding upstream 448813 10144087 ~ 10169389 (-)
G193940 pms2 non-coding upstream 591519 10286793 ~ 10288097 (-)
G193971 NA non-coding upstream 653825 10349099 ~ 10349540 (-)
G194041 NA non-coding upstream 793493 10488767 ~ 10489028 (-)
LOC113527760 LOC108273447,LOC108424882,LOC103023950,LOC100693129,LOC101473140,LOC103373902 other downstream 99231 9590561 ~ 9592549 (-)
trnal-aag_7 NA other downstream 101324 9590375 ~ 9590456 (-)
LOC113527759 LOC108273488 other downstream 101664 9587166 ~ 9590116 (-)
trnar-ucg_9 NA other downstream 175636 9516072 ~ 9516144 (-)
trnam-cau_28 NA other downstream 175895 9515814 ~ 9515885 (-)
pcgf5b pcgf5,LOC108410714,LOC107584148,LOC107753439,LOC107669177,LOC107594155 other upstream 274468 9969742 ~ 9990264 (-)
tom1l2 tom1l2,LOC108274196,LOC108432008,LOC107734205,LOC107731411,LOC107699872,LOC107594179 other upstream 877661 10572935 ~ 10586125 (-)
l3mbtl2 l3mbtl2 other upstream 1582893 11278167 ~ 11285972 (-)
G195173 prr15l other upstream 2688151 12383425 ~ 12387460 (-)
cd37 NA other upstream 2778801 12474075 ~ 12480176 (-)

Expression


Co-expression Network