slc16a9b (slc16a9)


Basic Information

Item Value
gene id slc16a9b
gene name slc16a9
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 7574076 ~ 7579872 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914557.2
ACGCAGGACAGAAGATTAAGCATTTTTTCAAGTTATTTAACATCCTGTCCACCATTCGGTTTTCTGGTTGCCATTGGTGACCGCAGCGTTCCATAGCAACCTCTCAGACCGCATACTAGCGCACTAAATAGCCAAGTGCGCCTCCACACCAGTGCAGGCATAACAGTACAGTGGTGCACTAGTGAGTGCGGTAGTATGCTGGTTAGGACGTGGCATGTTTCGGATGTGGACGCTGGTGATAGTTGTGTAGCTTCAGTAACCGGTTTGGACCGGAACAAACGCAGGGCTGCACAATacagctactactactactactactaataataatagtaataataatgatagtaataCACACGCGCGACATGTTTAGCATGGATGCTAACAAAGTGTTGATGCGGTCTGGTTTTTCTGTGTCGTTTCTCACAAATTTGTTCAATTCCACCGGCATTTCCACTTCAAACTAAACGAGCAGTTGTTGAGTAGCTGTCAGACATGGTGTAATTAGGTTTTTCTGTgctgtctttgtgtgctgtgaaTGACGGGGAAGTTATAGAGCATCGAAATGTGAGCAGACCAGCGGGAACAGCTTCAAACCGGTTTCAGCACCGCCGCAACAAAAGCGgctccagcaccacacacacacacttacactcactcacacacacacgcagtggaCAGCTGGCATGATTCAGCTGAATAAAAGTGTAACCTCGACTAGTTTCTTCTTGTCATTTATCCAAAACGTCATGATAttaagactgagtggtgtagcAGTGCAGAGAGGCAGCTCAGCATCTTAACTGCTCTCATTACATTTCTGCGACTGGCTGCACATTTCTGGGATCTCTTTGAAGAACCTAGCAGCTAAGAATGAGCTCTAAGAAAGCCATGGATGGAGGCTGGGGCTGGGTCATTGTGGTGGCCTCGTTCATAGCCCAGCTCCTCGCCTACGGCTCACCTCAGTCTGTTGGAGTGCTCTATCCCGAGTGGCTCAATGCCTTCCAAGAGAGCAAGGGGATGACCGCGTGGGTGGGGTCTCTGGTCTCCGGGGTCGGCCTCATTGCCAGTCCCATCTGCAGTGCCTGTGTGGTAAACTTTGGCGCCAGGCCTGTGACCATCTTCAGCGGAGTCATGATCTCTGGAGGCCTCATGCTTAGCGCCTTCGCCCCCAATGTCCACTTCCTCATGTTTTCCTATGGCGTAGTCGTCGGAGTAGGCTGTGGACTGCTGTATGCTGCTACCGTGACTATCACATGCCAGTACTTTGACAAGAAGCGTGGCCTTGCTCTTGGCATTGTTACTACAgGTACAAGTATTGGAGGATTCCTTTATGCCACGGCACAGAACGAATTCATTGAGATTTTTGGTCTTGATGGCTGCCTGCTGCTCATTGGATCATTTGCACTGAACATCGTTGCCTGTGGTGGACTGATGAGGCCGTTGCACTTGCCAGCTTACTACCTCAAGCAGAGAGCTGCCCTGGTGGAGAAGGCTGAAGAGAAGCTCAGTGAAAGGCCCCTGGCCCTGGACCACTCCATCAAAAAGGACCTGCCTGTCACTGATCTGCTGATCACAGTGGAGACCAAAGACACTCTGGCTTCAGAAAAGGAACTGCTGATCTGCTCAGCCTTGGTCAGACTGCTCAAGAAGAAGCAAAAGGCCTACATAGAATACTTACACTCCATTGCTGACCGAATGAGAGACCGGGTATTTGTAGCCATGTGCTTGGCACTGTTCCTCTACACCATGGGGGCATTTCCTCCACTGCTCTTCCTGGAGGATGTAGCCCAAAGTGAGGGCTTGATTGAGGGCATCAGCGTTGTCCCTCTGGTCTCAATATATGCTATTGCAGGGGGCATTGGGAAGCTACTGCTGGGAATGGTGATTGACATTCGCTGGATGAACAGCTTTTGTCTCTATGGCGTCACGCTGGTGGGCAGCGGCATGGCACTTCTGCTTATCCCTTTCATTAAGAGCTACATAGGGCTCCAAGTGATCTCAGTAGTGCTGGGTTTCTTCTCAGGGAACTGGTCCATCACACCCTACATGACCACCAAGGTGGTTGGCATAGAGCGGCTCACTGAGGCCTACGGGATCTTGATGTTCTTCGGTGGCTTTGGGATCATGCTGGGACCTCCAGTTGTAGGCTGGTTCTATGATTGGATGCAGTCCTATGACCTGGCCTTCTACTTCAGTGGGAGTTGTGTGCTGCTGGGTGGAGTGCAACTTCTGCTCTCTGCCCTGTCCTGCTGGGACAAAACCCATGAGTCGTCTGCCAAACCTGAGGCAGAGTGTACTCATAACTGTGACAGCGTGGCTGCCGTAGCCTAAAGGATGGACAGTCTTTTCTTTACCGGTGATTTGCCTGCTCAAGTCCGTGGCTGAACCTGAACCTGGTTTTAGTTGATTTACTTTTCAATGATACATTGCGCCTTATTGTTAGTTgatgttttggatttttgtaaTCTGATGCTCCAGTCAGTGTTTTGAAAACACCATTTTAAACGAATGGACTCAGACTTGTCCTGTCCTCAGTTGTCCTTTCCTAGCCTTGTTTTATGAGGCTCCAGGGTATGGTgacaaataatttcaaaatgtCTGTTTCTTAATTATTGatgctgtctgtttttctcgAAATGTATGTTCCCTGCATTGCGTTTCTTTTATATTGAAGTAACTGAGAGCATTATGCCATGACACTCATTCAAGACAAGATGcaaatgtctgattttttttttttccccaaagatgCAACACTATACCACATTCTGGTCCCTTAATAATGACATCTTGACTTATGTTGTTAGTTGTTAGTGTTGTTGTTAATGTTGTACCAAAGTTATTTGATTTTCATTGTCTTGGACAAAGGGTTAAATCGACAATCTCATGCCACAAATACTAAACCCAATCCGTCTTTGTGCTGCTGAAGTTATCTTTTCCACATAGTGTTGGCCCTGGATATCAGGAGCGCAGCTTGTTTTAACAAGGTGACTAATCCGACTCAAAAACTATTCaagtgtttgatgtgtgtcTGTAGGTGCGTTGGATGACATCGCTATCCACCTTTCATTTCAAGCAATTTGATATATTTCAAGCAATAtgtagacattttatttgtctatttcTATTTGTATACTCTAACACTTCTAGACTGTTGTATTTTTACATGCACTGAAGTAGGTTGTGCAGTGTTGATTTCtatattgtttgtttcttttttagatGAAGAGTTATTTTACTTGAACTGTCTCTGCATGAtgttattatgtaaaaaaaacatgaaaaatgataaTCTTTGGTTATAGGGTCATACGAGATGTGAAAGACCCTTACACTGTCTTAAAGCACATGATGCCACCtgtgatatttatgtatttatg

Function

symbol description
slc16a9 Predicted to enable monocarboxylic acid transmembrane transporter activity. Involved in urate metabolic process. Predicted to be integral component of plasma membrane.

NR:

description
PREDICTED: monocarboxylate transporter 9-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K08186 SLC16A9; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914557.2 True 3380 mRNA 0.46 6 7574076 7579872

Neighbor

gene id symbol gene type direction distance location
fam13c fam13c coding downstream 13326 7547063 ~ 7560750 (-)
zgc:171971 LOC108273425 coding downstream 131364 7435509 ~ 7442712 (-)
ube2d1b ube2d1,ube2d1b,LOC106607701,LOC105891213,LOC107717106,LOC107553913,LOC107733527,LOC105010549 coding downstream 146242 7421966 ~ 7427834 (-)
pcdh15b pcdh15b,pcdh15,LOC107695531,LOC107654051,LOC108273410,LOC108411428 coding downstream 342001 7047571 ~ 7232075 (-)
a1cf a1cf,LOC107695528,LOC107708930,LOC107654048 coding downstream 726110 6836437 ~ 6847966 (-)
tmem26b tmem26 coding upstream 224648 7804520 ~ 7809766 (-)
egr2b egr2,egr2b,LOC107739063,LOC107596614,LOC107653961,LOC107596611,LOC107593522,LOC107745678 coding upstream 399684 7979556 ~ 7990069 (-)
jmjd1cb jmjd1c,jmjd1cb,LOC108412835 coding upstream 441662 8021534 ~ 8141060 (-)
LOC113527613 cyp26a1,LOC108273895,LOC108412396,LOC103044660,LOC107745679,LOC107653962 coding upstream 618212 8198084 ~ 8201220 (-)
exoc6 exoc6,LOC107654070 coding upstream 628072 8207944 ~ 8261110 (-)
G192437 NA non-coding downstream 145193 7428587 ~ 7428883 (-)
G192385 NA non-coding downstream 261189 7228390 ~ 7312887 (-)
G192074 NA non-coding downstream 758641 6813165 ~ 6815435 (-)
G192075 sgms1 non-coding downstream 764318 6808205 ~ 6809758 (-)
G192062 NA non-coding downstream 774000 6799642 ~ 6800076 (-)
G192545 NA non-coding upstream 49439 7629311 ~ 7630373 (-)
G192583 NA non-coding upstream 260491 7840363 ~ 7841460 (-)
G192584 NA non-coding upstream 261757 7841629 ~ 7841947 (-)
G192585 NA non-coding upstream 262188 7842060 ~ 7842634 (-)
G192611 NA non-coding upstream 294894 7874766 ~ 7877699 (-)
ipmkb ipmk other downstream 155698 7400000 ~ 7418378 (-)
itga3b itga3 other downstream 979686 6546941 ~ 6594390 (-)
LOC113527291 LOC108274042 other downstream 1782806 5768528 ~ 5791270 (-)
G191430 NA other downstream 1960122 5611120 ~ 5613954 (-)
gdpd3b gdpd3 other downstream 2083151 5484691 ~ 5490925 (-)
ccdc6b ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 other upstream 1478 7581350 ~ 7595881 (-)
ank3b ank3,LOC107746453,LOC107654059 other upstream 21346 7601218 ~ 7767512 (-)
si:dkey-94l16.4 LOC108273749 other upstream 1267790 8847662 ~ 8857748 (-)
LOC113527700 shisa6,LOC108273473,LOC108424875,LOC107706559 other upstream 1788345 9368217 ~ 9419487 (-)
trnam-cau_28 NA other upstream 1935942 9515814 ~ 9515885 (-)

Expression


Co-expression Network