tmem26b (tmem26)


Basic Information

Item Value
gene id tmem26b
gene name tmem26
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 7804520 ~ 7809766 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914587.2
CTGCAGTGTGTAGTATCCATTATCAGGATAAGCTCCTGTCTGTGTTTGCTTATTGTACAGCCATGCTTCTGAGGTTCATTTGCTCGGTTGTCACTAGAtcactatttattttaatttcactcaTAGGTGTGTGGAGAGTCGTATGGGTGAAAAACGACAAGTTATTCTGGCTGCTAACTATCCTGTTTCTACCCCTTGTAGTGGAAATGATTTTAAcactgaggagaagaaaaggcAAAGACTGTAAGTGGTTCTCTCCACCAATTTTGCTGTTCCTTCTCAGCATTATACCGAGCATTTGGATCCTTgagcttcatcatcatcagaataAACACAGTTATGCCAAGTGTAATCGACTCGATTCATCAGAGAACGTTAAAGATTTCGTTCAACACTGGAGGAGCTCTAATGCTACTAATGAGACCGATATTTATAAGTTTTTAAAGGACTCTGAGAAGCTCTTGTCATCAGTGTGCCCCAACGACTGGATTTTGGCACTACACCAGGCCTTGCTGTTGCTGCTGATTGTGGGAAAGTGGCTGATGCCCAACGAAGGAGGCCTCACCCGAGACGAGCTCTCGCAACTGCTCCTCATCTTTGTAGGGACGGCCGCAGACATCCTTGAGTTCACTAGCGAGACTCTGTCCGATGTCAAGGATAAGAGCCCAGTGTTGGTGTACATTATTCTAGCCATTTGGACATGGAGTATGCTACAGTTCCCTCACAATCTCACAGTGTTAAGCTCTAGAACAGAGGAGTGTGAGACGCAGACTGACTCTCTCCTCTCTCGACACCGAACAGACTTCTGGGCTGTGATTGAAGCCCTCTTGATTCAGGACGGCCCGTTTTTGTTGGTCCGCCTGACCGTCATGATACACTTTGAAATTGTTCACCAAATGCTGGTCTTCTTTGCCATCAAGAACTTTCTGGTGGTGGCACTGAATGTGTATCGCCTCTGGGTCATTTGTTGGGACTCCAGATCCTGAGAAAGTCTTTCTTTCCTGAGAAAGATATTCTTATTAGAATATCATCTAGCCGAGACTTGTTTAGGAGAGTTTGAAAAGTACagcttacattttatatatgagATTCATTAAAAAGTGTAATCTGATTACTTAGTTGATTAATTATTGTTATATGTCTGtgtacaataatttttttatttaaaaaataactgaagTTGCAGGTAGTAGattagtataaataataaaccagcAATATCAATGTATACATATAACAGGGATGGACAGTATTTCTGTATACatgtacaaataaatgtttgaaatagcAAAAGAAAGTATTTTGCAATTTGTGTTTGATGCTtccaggagaagaagaaaaaaatgatttcatcAAA

Function

symbol description
tmem26 Predicted to be integral component of membrane.

NR:

description
PREDICTED: transmembrane protein 26

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914587.2 True 1357 mRNA 0.41 6 7804520 7809766

Neighbor

gene id symbol gene type direction distance location
slc16a9b slc16a9 coding downstream 224648 7574076 ~ 7579872 (-)
fam13c fam13c coding downstream 243770 7547063 ~ 7560750 (-)
zgc:171971 LOC108273425 coding downstream 361808 7435509 ~ 7442712 (-)
ube2d1b ube2d1,ube2d1b,LOC106607701,LOC105891213,LOC107717106,LOC107553913,LOC107733527,LOC105010549 coding downstream 376686 7421966 ~ 7427834 (-)
pcdh15b pcdh15b,pcdh15,LOC107695531,LOC107654051,LOC108273410,LOC108411428 coding downstream 572445 7047571 ~ 7232075 (-)
egr2b egr2,egr2b,LOC107739063,LOC107596614,LOC107653961,LOC107596611,LOC107593522,LOC107745678 coding upstream 169790 7979556 ~ 7990069 (-)
jmjd1cb jmjd1c,jmjd1cb,LOC108412835 coding upstream 211768 8021534 ~ 8141060 (-)
LOC113527613 cyp26a1,LOC108273895,LOC108412396,LOC103044660,LOC107745679,LOC107653962 coding upstream 388318 8198084 ~ 8201220 (-)
exoc6 exoc6,LOC107654070 coding upstream 398178 8207944 ~ 8261110 (-)
adam8b LOC108273892 coding upstream 459825 8269591 ~ 8282862 (-)
G192545 NA non-coding downstream 174147 7629311 ~ 7630373 (-)
G192437 NA non-coding downstream 375637 7428587 ~ 7428883 (-)
G192385 NA non-coding downstream 491633 7228390 ~ 7312887 (-)
G192074 NA non-coding downstream 989085 6813165 ~ 6815435 (-)
G192075 sgms1 non-coding downstream 994762 6808205 ~ 6809758 (-)
G192583 NA non-coding upstream 30597 7840363 ~ 7841460 (-)
G192584 NA non-coding upstream 31863 7841629 ~ 7841947 (-)
G192585 NA non-coding upstream 32294 7842060 ~ 7842634 (-)
G192611 NA non-coding upstream 65000 7874766 ~ 7877699 (-)
G192665 ado non-coding upstream 164448 7974214 ~ 7977154 (-)
ank3b ank3,LOC107746453,LOC107654059 other downstream 37008 7601218 ~ 7767512 (-)
ccdc6b ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 other downstream 208639 7581350 ~ 7595881 (-)
ipmkb ipmk other downstream 386142 7400000 ~ 7418378 (-)
itga3b itga3 other downstream 1210130 6546941 ~ 6594390 (-)
LOC113527291 LOC108274042 other downstream 2013250 5768528 ~ 5791270 (-)
si:dkey-94l16.4 LOC108273749 other upstream 1037896 8847662 ~ 8857748 (-)
LOC113527700 shisa6,LOC108273473,LOC108424875,LOC107706559 other upstream 1558451 9368217 ~ 9419487 (-)
trnam-cau_28 NA other upstream 1706048 9515814 ~ 9515885 (-)
trnar-ucg_9 NA other upstream 1706306 9516072 ~ 9516144 (-)
LOC113527759 LOC108273488 other upstream 1777400 9587166 ~ 9590116 (-)

Expression


Co-expression Network