cpxm2 (cpxm2,LOC106577304,LOC107569505)


Basic Information

Item Value
gene id cpxm2
gene name cpxm2,LOC106577304,LOC107569505
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 24539290 ~ 24589833 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914653.2
TTTTCATTGAGGATCTCGAGAAGTCTGAaaactttctctctcactcagggATTTtcaagaggaagagagagaaagagacagaaaaagacaagaggacagaagacagaaaagagaaaaaacataaaaggggagaagaagggaaaagaggacagaaaaggagagacaaggagagaagATGATGGTGTCCTTCTTCTCCATTGTACCAGGACATCCCGCTCTCTTCGCTCTCTCGCTGCTCGGCATTGTGGGATTGTTTCCGGACGTCTCTCGGGGATTCCCGAGTGAAGATGAGGATTATTACATGCAGGAGCTGTTGAGCAGGGAGCATTATTACCGCGTTCCTGTCCTGGAGGAGAGCGCGGTGGAAGGTCATGAACTTTCCACACCACCTGTCCACAACAAACCCAAAACCCCGGGGAAACAAGCTGGAGGAAAGACAAAGTCAGtgaAATCTTCAAACAAGAAGGCTGAGAAAACTGCTAACAGCATCAGTGAAGCAGACGGACATTACCGGTCCGAGAGAGTGGATTGCCCGCCTCTCGGCCTGGAGACTCTGAAAATCGATGACTTCCAGCTTCACGCCTCCAGCATGCAGCGGTACGGTCTGGGAGCTCACAGAGGACGACTCAACATCCAGGCTGGTCTGTATGAGGACGATCTGTACGACGGAGCGTGGTGTGCAGGCAGGAACGACCCGCTGCAGTGGTTCGAGGTCGACGCCCGGAGACTCACCAAATTCACCGGAGTTATAACACAGGGCAGGAGCTCACACTGGtcGAGTGACTGGGTGACGTCGTACCGAGTTTTGGTCAGCAATGATTCACACACCTGGGTGACTCTGAAGAATGGCTCCAGAGACCTGCTGTTCATTGGCAATAAGGAGAAGGAGATCCCAGTGCTGAACAAATTCCCCAGGCCTGTGGTGGCGCGCTACATCCGGATCAACCCGCGCTCCTGGTACAACCACGGCAGCATCTGTATGAGGGCGGAGATCCTGGGATGCCCCTTaccagATCCTAATAATTATTACCACCGCCGCAATGAAATCACCACCACAGACAAGCTGGACTTCAGACACCACAATTACAAAGAGATGAGGCAGTTAATGAAGGTGGTGAATGAAATGTGCCCGAATATTACCCGGATTTATAACATCGGGAAGAGCTACAACGGACAGAAACTCTACGCTATAGAGATAACAGATAATCCAGGAGAACATGAGCTGGGTGAGCCGGAGTTTCGCTACACGGCGGGTTCCCATGGCAACGAGGTGCTGGGGCGTGAACTCCTCCTCCTGTTAATGCAGTTCTTATGCGTGGAGTATCGCTCCGGTAACCAACGGATACGACACCTGGTTCGCGAGACGCGGATCCATTTACTGCCATCGGTCAATCCAGACGGATACGACAAGGCCTCAGAGGCTGGCTCGGAGTTGAGCGGATGGTCTTTGGGTCGATGGAGTCAGGACGGCATGGACATCCACCATAACTTCCCTGACCTGAACAAAATTCTGTGGGAAGCCGAGTCTCGGAAATGGGTTCCACGCAAGTTCCACAACCACCACATACCCATTCCTGAGTGGTACCAGTCCAAAAATGCCACGGTTGCCATGGAGACGCGGGCACTGCTGGGATGGATGGACAAGATCCCCTTCGTCTTAGGGGGCAATCTTCAAGGCGGCGAGTTGGTAGTGACCTTCCCTTATGACCGGACTCGACAATCTGGAGTTCTGAAGGGGGCCACGCCCACTCCGGACGACCCGGTGTTCCGCTGGCTGGCGTTCTCGTACGCGTCCACACACCGGCTGATGACAGCCCCGACGCGCAGGGTGTGTCACACACACGACTTCGCCAAAGAGGACGGCAACATCAACGGGGCGTCCTGGCACACGGCCGCAGGAAGTATGAATGATTTTAGCTACCTCCACACCAACTGCTTTGAGCTGTCCATGTACGTGGGCTGTGACAAGTTTCCTCATGAGAGCGAGCTGCCTGAGGAGTGGGAGAACAACCGCGAGTCTCTGCTTGTGTTCATGGagcaggtTCATCGGGGTATTAAGGGTGTGGTGAGGGACATGCAGGGGAAAGGCATCGCCAATGCCATAGTCAGTGTGGAGGGCATCAACCACGACATCCGCACAGccGCGGATGGAGATTACTGGCGTTTGCTGAACCCGGGCGAGTACAGCGTGACGGTGCGAGCCGAAGGCTACGGTCTCACCCGTAAAGTGTGTGAAGTCGGTTACGACATGGGAGCCACGCAGTGCGACTTCAGACTCGCTCGCTCCAACCTGTCACGCATCAAAGAAATCATGGAGAAGTTCAACAAGCAGCCAATCAACATGCGACGACCTCAACAGAGACGCCCGGGGACATAGACGACGCTGTGTGAGGGACTGAAAGGGAACCCGGGTGTGTGCTGGACATTCTGGACTGTTTTAGACTGTATGAAGTCTGATggtgaaaaaagaatgaattaagTAATCAGATAGAGAACTGGATAAAGGATAGCGGATACACACATAAAGGATAGAGGATACACACATAAAGGATAGAGGATACACACATAAAGGATAGAGGATACACACATAAAGGATAGAGGATACACAAGAGCCGCTTGGTTCTGtagaaaatagatttttttgttatttcaggCTGTAAATGCGCTTCAACACGAAGCTACAGAAAGAGCAAAGTGTCCATTTTATATCGacataagtgttttattcagaattaatataattacaGAGTGCATGAACAGAGTTATTAGAGAATTATAAACACCAAAACTGGCATGGAAATAAAACTCTCAGCATTACTATCCGTTTAAAGCatgtttttctgcatttattattattcactgaTGTGGAGCAATACGTCAAtctaaagaagaataaaaccatcctgaagttgattattttcctataacagcacgtcctcaagtgttttattccccttataccacagcaacgtGTCAGTGAGTACGATTCTTCAATTTACATTTCATTCTGTGCAACAtccaagttagttcctgttctcacttccgttacagcagctataaacagtcgttccctcatcagcttctcttttactctctcgAAGTTAAAAAGAATGCAGCTGGTTGTTTTTTGTTAGAGAGAAACTGCAGTGTTTTGGAaaactgaaagttacagctttacctctggctcttaaaaagccctgacactggagactccttccataaacatctccttacagaaaacttcaccatatcaccaaTCTTTagaaat

Function

symbol description
cpxm2 Orthologous to human CPXM2 (carboxypeptidase X, M14 family member 2).

NR:

description
PREDICTED: inactive carboxypeptidase-like protein X2

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0007155 cell adhesion biological_process
GO:0004181 metallocarboxypeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08639 CPXM2; carboxypeptidase X2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914653.2 True 3268 mRNA 0.49 14 24539290 24589833

Neighbor

gene id symbol gene type direction distance location
oat oat,LOC107569518,LOC107684577 coding upstream 140843 24380301 ~ 24398447 (+)
fam53b fam53b coding upstream 215676 24285081 ~ 24323614 (+)
hpdl hpdl coding upstream 265467 24267278 ~ 24273823 (+)
ctbp2l ctbp2,LOC105926449,LOC107387783,LOC106955101,LOC103481571 coding upstream 304206 24132906 ~ 24235084 (+)
mmp21 mmp21 coding upstream 458678 24067539 ~ 24080612 (+)
LOC113527709 hmx2 coding downstream 79385 24669218 ~ 24674576 (+)
bub3 bub3 coding downstream 87351 24677184 ~ 24685154 (+)
LOC113527566 ikzf5 coding downstream 271583 24861416 ~ 24864681 (+)
lrit1b lrit1 coding downstream 409117 24998950 ~ 25003270 (+)
lrit2 lrit2 coding downstream 418015 25007848 ~ 25013291 (+)
G202007 NA non-coding upstream 56848 24480257 ~ 24482442 (+)
G201844 NA non-coding upstream 200560 24338134 ~ 24338730 (+)
G201843 NA non-coding upstream 201222 24337024 ~ 24338068 (+)
G201782 NA non-coding upstream 302511 24203862 ~ 24236779 (+)
G201814 NA non-coding upstream 313664 24224878 ~ 24225626 (+)
G202115 NA non-coding downstream 85849 24675682 ~ 24676158 (+)
LOC113527734 NA non-coding downstream 199487 24789320 ~ 24791405 (+)
LOC117598647 NA non-coding downstream 226648 24816481 ~ 24818352 (+)
G202172 NA non-coding downstream 256000 24845833 ~ 24891292 (+)
G202173 NA non-coding downstream 262454 24852287 ~ 24853885 (+)
LOC113527444 chst15 other upstream 33214 24455659 ~ 24506076 (+)
G201962 NA other upstream 157003 24381787 ~ 24382287 (+)
afap1 afap1,LOC107733469,LOC107657296,LOC107584377 other upstream 850873 23604837 ~ 23688417 (+)
polr2a polr2a,LOC107733452,LOC107584383 other upstream 1140627 23272574 ~ 23398663 (+)
G201214 NA other upstream 1209719 23324073 ~ 23329571 (+)
LOC113527710 hmx3 other downstream 71211 24661044 ~ 24666608 (+)
dupd1 comtd1,cmtd1,LOC108273857 other downstream 739376 25329209 ~ 25428112 (+)
G202397 LOC108273443 other downstream 907882 25497715 ~ 25498919 (+)
G202374 NA other downstream 908347 25498180 ~ 25502628 (+)
LOC117598538 NA other downstream 1409818 25999651 ~ 26005825 (+)

Expression


Co-expression Network