nat9 (nat9)


Basic Information

Item Value
gene id nat9
gene name nat9
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 21961118 ~ 21966747 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914657.2
GTGTTTTCCGCCTGGTTTTAAACCGTTTCAGTAGAAACGGTGTTGTTTTTGgttatttatattatgtgtGAGTGTtaaactgtataatataaattaattttaatttgaatggTTAATAAGAATCCTTGAAAACACGCCGTTAAAAGCAGGAtaaaatttcagaaaaatgcGGATAAATGAAGACATTTTACTGGAAGGCAGTAAGGTTGTGTTGGTTCCCTACAACACTGAACATGTTCCCAGGTATCACCAGTGGATGACGTCAGCCGAGCTGCAGAAACTCACTGCGTCTGAACCTTTAACCCTGGAGCAGGAATATGACATGCAGAGAAGCTGGCGAGAAGATGAGGATAAGTGCACATTTATCGTCCTGGACAAGCAGCGATGGACAGATCCGAGCATCTCAGAGGAAGATTGCATGGTGGGAGACGTCAACCTCTTCCTGACTGACCCCAGTGACCCGTCACTGGCTGAGCTGGAGATCATGATAGCAGAGCCCAACTACAGAGGCAGAGGATTTGGCAAAGAAGTGACATACATGATGATGCGTTACGGCATCACCAAACTCGGCATCAAGAAATTCGAAGTGAAGATCGGTTTGGAAAACAGGATCAGCATAGATATGTTCAAGAAGCTCCAGTTTCAAGAGCTCTCCATCAGCGAGGTGTTTCAGGAAGTGACTCTTGGCCTGACTGTGAGTGAGGCATCATGGGAAGAGTTGCTGGGCAGCACGGATATcgcacaggagagagagtatggaAAAACACGGGACTCTAGGCACAGAGAAAAACATTCTTTAACCACCGGAGCTGATGGGAACTGAGAAGAGAGACGGTTTTAATGAGAGCCAGAGAGTAAACGGAGAAAAGGTTCACACAGGAGTATCAGCAGATATctaaacatcatttattttgcTGCTAAAAGCAACTCTGATTTGTTATATTGCACTTTTAACACAGCCTTTGTGTTCTGTCCAGGCCAAAATGATTCACTTACAGCGGAACAAAACTACAAATGATTTTTCCACCTTTAGGCATTTTAAGTGCGTGGCTCAGTTAGctcaaaatgaacattttcgTTTCTTATAatcagtgttttaatatttcaatattatctGCTTTTAAGAAGCAAGTTTACACCATTGACATGGTTATTGTTTTAGGAGCAGGGAGGAATCAATTCTTAGATACATCTCTATTGATTTCCCAAAAGTGTTACAATCTGatcattttgtcttttcatCGCATGTAAAATGACCGGTTTGTGTAAATTATGAAACACAAAGTCACCTTC
>XM_026914659.2
ACAACCAAGAGCTGTTTTGGGCGCACCTTGATGACATCAGTGAGAAATTGGAtaaaatttcagaaaaatgcGGATAAATGAAGACATTTTACTGGAAGGCAGTAAGGTTGTGTTGGTTCCCTACAACACTGAACATGTTCCCAGGTATCACCAGTGGATGACGTCAGCCGAGCTGCAGAAACTCACTGCGTCTGAACCTTTAACCCTGGAGCAGGAATATGACATGCAGAGAAGCTGGCGAGAAGATGAGGATAAGTGCACATTTATCGTCCTGGACAAGCAGCGATGGACAGATCCGAGCATCTCAGAGGAAGATTGCATGGTGGGAGACGTCAACCTCTTCCTGACTGACCCCAGTGACCCGTCACTGGCTGAGCTGGAGATCATGATAGCAGAGCCCAACTACAGAGGCAGAGGATTTGGCAAAGAAGTGACATACATGATGATGCGTTACGGCATCACCAAACTCGGCATCAAGAAATTCGAAGTGAAGATCGGTTTGGAAAACAGGATCAGCATAGATATGTTCAAGAAGCTCCAGTTTCAAGAGCTCTCCATCAGCGAGGTGTTTCAGGAAGTGACTCTTGGCCTGACTGTGAGTGAGGCATCATGGGAAGAGTTGCTGGGCAGCACGGATATcgcacaggagagagagtatggaAAAACACGGGACTCTAGGCACAGAGAAAAACATTCTTTAACCACCGGAGCTGATGGGAACTGA
>XM_026914660.2
TGCGTGTTTTCCGCCTGGTTTTAAACCGTTTCAGTAGAAACGGTGTTGTTTTTGgttatttatattatgtGAtaaaatttcagaaaaatgcGGATAAATGAAGACATTTTACTGGAAGGCAGTAAGGTTGTGTTGGTTCCCTACAACACTGAACATGTTCCCAGGTATCACCAGTGGATGACGTCAGCCGAGCTGCAGAAACTCACTGCGTCTGAACCTTTAACCCTGGAGCAGGAATATGACATGCAGAGAAGCTGGCGAGAAGATGAGGATAAGTGCACATTTATCGTCCTGGACAAGCAGCGATGGACAGATCCGAGCATCTCAGAGGAAGATTGCATGGTGGGAGACGTCAACCTCTTCCTGACTGACCCCAGTGACCCGTCACTGGCTGAGCTGGAGATCATGATAGCAGAGCCCAACTACAGAGGCAGAGGATTTGGCAAAGAAGTGACATACATGATGATGCGTTACGGCATCACCAAACTCGGCATCAAGAAATTCGAAGTGAAGATCGGTTTGGAAAACAGGATCAGCATAGATATGTTCAAGAAGCTCCAGTTTCAAGAGCTCTCCATCAGCGAGGTGTTTCAGGAAGTGACTCTTGGCCTGACTGTGAGTGAGGCATCATGGGAAGAGTTGCTGGGCAGCACGGATATcgcacaggagagagagtatggaAAAACACGGGACTCTAGGCACAGAGAAAAACATTCTTTAACCACCGGAGCTGATGGGAACTGA

Function

symbol description
nat9 Predicted to enable N-acetyltransferase activity. Predicted to be involved in protein acetylation. Orthologous to human NAT9 (N-acetyltransferase 9 (putative)).

NR:

description
N-acetyltransferase 9 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914657.2 True 1293 mRNA 0.41 7 21961174 21966747
XM_026914659.2 False 724 mRNA 0.48 7 21961118 21966277
XM_026914660.2 False 744 mRNA 0.47 7 21961171 21966277

Neighbor

gene id symbol gene type direction distance location
itgb3b itgb3,itgb3b,LOC108430317,LOC107698806,LOC107700113 coding upstream 1900 21936415 ~ 21959218 (+)
kcnj2a kcnj2,LOC108274206,LOC108429808,LOC107597836,LOC107704237 coding upstream 170891 21783029 ~ 21790227 (+)
kcnj16 LOC108274207 coding upstream 183287 21753341 ~ 21777831 (+)
unc13d unc13d,LOC107753247,LOC107597824,LOC107755420,LOC107704240,LOC107561838 coding upstream 321534 21612958 ~ 21639584 (+)
pmp22b pmp22,LOC107561836,LOC107692454,LOC107753252,LOC107684480,LOC107597829 coding upstream 808192 21139857 ~ 21152926 (+)
LOC113527221 NA coding downstream 62342 22029089 ~ 22035625 (+)
si:ch211-119c20.2 LOC108274060 coding downstream 71225 22037972 ~ 22089270 (+)
LOC113527624 NA coding downstream 157589 22124336 ~ 22126646 (+)
LOC113527641 NA coding downstream 234754 22201501 ~ 22204029 (+)
LOC117598678 NA coding downstream 273758 22240505 ~ 22242775 (+)
G200430 NA non-coding upstream 306382 21653231 ~ 21654736 (+)
G200420 NA non-coding upstream 317464 21639694 ~ 21643654 (+)
G200418 NA non-coding upstream 350661 21610254 ~ 21610457 (+)
G200325 NA non-coding upstream 575085 21384076 ~ 21386033 (+)
G199796 NA non-coding upstream 1365674 20595241 ~ 20595444 (+)
G200555 NA non-coding downstream 7482 21974229 ~ 21978282 (+)
G200556 NA non-coding downstream 12336 21979083 ~ 21979381 (+)
G200559 NA non-coding downstream 19615 21986362 ~ 21987001 (+)
G200560 NA non-coding downstream 20773 21987520 ~ 21987869 (+)
G200561 rnf157 non-coding downstream 21439 21988186 ~ 21988754 (+)
si:ch211-216b21.2 LOC108273439,LOC107082319,LOC108429207,LOC107704231,LOC105932487,LOC108246656,LOC108274355,LOC102229454,LOC106946734 other upstream 460189 21457391 ~ 21500929 (+)
LOC113527713 fam196a other upstream 2394434 19526642 ~ 19566684 (+)
si:ch211-221j21.3 LOC108273429 other upstream 3148856 18806077 ~ 18812262 (+)
G198737 ppp2r2d,LOC107706599,LOC107653113,LOC107582184,LOC107553689 other upstream 3450959 18441886 ~ 18510159 (+)
pde6gb pde6g,LOC102781464,LOC103367935,LOC102221623 other upstream 3801032 18155145 ~ 18160086 (+)
G200571 NA other downstream 36077 22002824 ~ 22003274 (+)
srsf2a srsf2,LOC106612293,LOC107702465,LOC107566380 other downstream 41764 22008511 ~ 22012304 (+)
LOC113527202 NA other downstream 47059 22013806 ~ 22026481 (+)
mrpl27 mrpl27,LOC107665862,LOC108430158 other downstream 831395 22798142 ~ 22871284 (+)
G201154 NA other downstream 1238919 23205666 ~ 23206379 (+)

Expression


Co-expression Network