tmem101 (tmem101)


Basic Information

Item Value
gene id tmem101
gene name tmem101
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 5289712 ~ 5294398 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914669.2
CCAGGAGAAGAAGACATCACTTCCGCCTTCAGTAATCATGGCGCCTCCGAGTAGAAAACAAGTGCTGAGGTTCATCGCGCAGTTCGGAGCTTTTATTCTGACCCGGTTCGGTTTCTGGAACTGCTTCAGCATGCTCATGCTTTTTGCCGAGCGGGCCGACGTGAAAAGGAAGCCAGATATCCAGGTGCCGTACTTGTACGTTGACATGGCAGCAGCAGTGTTGTGTGCCAGTTTCATGTCGTTCGGGGTGAAGAGGAGATGGTTTGCTCTCGCCGCCGCAATCCAGTTGGCTTTCAGCACGTACGCGTCCTACATCGGTGGACATGTCCATTATGGAGACTGGTTAAAGGTGAGGATGTACTCGAGGGCCATGGCTGTTATCGGAGGTTTCCTAGTGCTGGCCAGTGGAGCAGGAGAAGTGTACAGGCAGAAACCACGTACACGCTCACTACAATCCACTGGCCAAGTCTTCTTAGGAATCTACTTAATCTGTGTGGTTTACTCCCTCCAGCACAGTCAGGAGGACAGATCAGCGTACTTGGACCACATCCCCGGTGGTGAGATCACCATTCAGCTCCTGGTTATTCTCTTTGGcttgctcgctctctctttcctctcggGGTACTACGTGCGTTTAGCCGCACAGATTTTAGCCGTGCTCCTCCCACTCATCATTCTGTTCATCGATGGAAATATTGGCTACTGGCACCACACGCGCCGCGTCGAGTTCTGGAACCAGATGAAGCTGATCGGACACAATGTGGCCATCTTCGGAGCTGTGCTTATCCTCGGTACAGATGGCtaaacacacaggaagtgaatgTCAGCTTAGCACAAATAGTGAACAGTAGCTGCAGTGGTGCTTAAAAGTTTGTTAAACctttagaattttctatatttctgcaaaAATGTGACCTAAAAcatcatcattttcacacaAGTCCTAAATGTAGACAAAGAGAACCCAGTTAATCAAATGagataaaaatattatacttggtCATTTGTTTATTGAGGAAAACGATCCAATATTACATTTCTGTgagtggcaaaagtatgtgaacctctaGGGTTAGCAGTTAATTTGAAGGTGAAATTAGAGTCAGGTGTTTTCAATCAATGGGATGACAATCAGGTGTGAGTGAGCGctctgttttattaaaagtgcaGAGATCTATCAAAGGCTGATCTTCACAACACGTTTGCGTAAATGTATCACGGCGCAAACAAAGGAGATTTCTGAGGACCTCAGAAAAAGAGAGTTGTTGATGCTCATCAGGCTGGAAACGGTTACAAAACCATCTCTAACGAGTTTATACTCCACCAATCCAGTCAGACAGATTGTGTACAAATGGAGGCCACTGGATTTccctcaataaataaatgaccaagaataatattttttgtctcatttgtttaattgggtgCTTTTTGTCTACTTTTCGGACTGGTGTGAAAATTTGATTAGGTTTTAGAtcatatttatgcagatatATAGAAAATTgataaagggttcacaaactttcaagcaccacTGTACATTCAAACCGCACTGAACGGTTGCTCCAAATTATGTGTTAAATGTCAGAGTAGAGTGGCAACTCTTGAGTTCAATATTGGCTATGTCCAAACCTAgagaagaaaacatttcagatgtTAAACTGCAGAGCTGGCTTTGTATCTGACATTATTCAGTACGCTAATGCGCGGCTTTGTACTTGGAGGCGGAATACTCCTCTGGCATACTGTACCGGAGAGATGGCacaatattattacacactgtTTTCAGATTATGTTCTGATTATGTTGCCTGTTTCTCAGGGTTGAATTGGAATTCTTCAGTCATCATTCTAGATACTGACAGGCAAATTATTTATGAATCCAGTTTAAGAATAGAGATATCACCTTGCTACATTTTTGCCTGTGGTcgtcattttaaagaaaaggcCAGTTTGAAAAAGGTGTTTGAATCTTAAGTGActgtttacatttcatttcagcttttttttttacttaatgtaAGATTTGCTACAGGTCTTAAAAATGTTGGATTGTTAATTAGAGCCTGTTTAAAAGGCTGTTTTGAATGCTGTATACTATGTTAAAAAAGGGGGAATATTTTTTGTCAGCTGTCATAAGCAATTCCAAGACTGCTCCATTACTGGCAGCTCATAGCACTACATTCTTTCTTAATGAAATATCATTGCATCATTGTTTATTAAACAGTGAAAGTTTTCTATTTGAA

Function

symbol description
tmem101 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM101 (transmembrane protein 101).

NR:

description
transmembrane protein 101

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914669.2 True 2245 mRNA 0.42 4 5289712 5294398

Neighbor

gene id symbol gene type direction distance location
g6pc3 g6pc3 coding downstream 24355 5256264 ~ 5265357 (-)
pagr1 pagr1 coding downstream 291380 4991942 ~ 4998332 (-)
trnap-agg_4 NA coding downstream 371825 4917816 ~ 4917887 (-)
trnap-ugg_13 NA coding downstream 374136 4915505 ~ 4915576 (-)
trnap-ugg_12 NA coding downstream 375326 4914316 ~ 4914386 (-)
trnai-uau_5 NA coding upstream 7715 5302113 ~ 5302205 (-)
LOC113527073 LOC108274342,LOC108274341 coding upstream 17846 5312244 ~ 5322475 (-)
sgca LOC108273949,LOC108444285 coding upstream 110784 5405182 ~ 5416607 (-)
lrrc45 lrrc45,LOC107736618 coding upstream 152074 5446472 ~ 5456359 (-)
trnav-uac_7 NA coding upstream 179000 5473398 ~ 5473470 (-)
G190885 NA non-coding downstream 538835 4701104 ~ 4750877 (-)
G190849 NA non-coding downstream 623141 4666312 ~ 4666571 (-)
G190829 NA non-coding downstream 692889 4596539 ~ 4596823 (-)
G190821 NA non-coding downstream 714182 4573682 ~ 4575530 (-)
G190742 NA non-coding downstream 1000909 4288417 ~ 4288803 (-)
G191279 LOC108273947,LOC107720033,LOC107689922,LOC107561997,LOC107693674 non-coding upstream 88597 5382995 ~ 5387137 (-)
G191413 NA non-coding upstream 148564 5442962 ~ 5445167 (-)
G191424 NA non-coding upstream 188222 5482620 ~ 5484667 (-)
G191463 NA non-coding upstream 371775 5666173 ~ 5667846 (-)
G191464 NA non-coding upstream 373486 5667884 ~ 5669753 (-)
LOC113527048 LOC108274181 other downstream 226294 5059498 ~ 5063418 (-)
G191056 taok2,LOC108273910 other downstream 336853 4949163 ~ 4952859 (-)
trnap-cgg_3 NA other downstream 370735 4911734 ~ 4918977 (-)
ndufa4 ndua4,ndufa4,LOC108443163,LOC103023526,LOC107745684,LOC107684782,LOC107569184 other downstream 2434219 2852055 ~ 2855493 (-)
LOC117598559 NA other downstream 2461960 2793046 ~ 2827752 (-)
gdpd3b gdpd3 other upstream 190293 5484691 ~ 5490925 (-)
G191430 NA other upstream 316722 5611120 ~ 5613954 (-)
LOC113527291 LOC108274042 other upstream 474130 5768528 ~ 5791270 (-)
itga3b itga3 other upstream 1252543 6546941 ~ 6594390 (-)
ipmkb ipmk other upstream 2105602 7400000 ~ 7418378 (-)

Expression


Co-expression Network