map2k4b (map2k4,LOC108274195,LOC108424869,LOC107556463,LOC107719678,LOC108433489)


Basic Information

Item Value
gene id map2k4b
gene name map2k4,LOC108274195,LOC108424869,LOC107556463,LOC107719678,LOC108433489
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 9142501 ~ 9156288 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914687.2
CCTTTATTTTGAAGTGAGACTCGGAAATGTCGTGCTGTGTCGCTCTCTCTGCCCACTCCACTCATCTTATCCTTAACAACACCGAGCAGCTGAAATGGAGCTGCTTTAACCTCCTGTCCTCTTTCCTTGTGCTAGTGATGTGCTGATTTATGCTGGATCTGGCCCAGTACACCTGTTTGGAATATCGCTGCCGtcctctgtttcttttcttttttttgcggTTCtgttgaaaacacacacacacacacacacacacactgtctgtgagCAATGGCGACTCCCAGTCCTAGCACTAACTCCCCAACTTCATGCAATAGCATGAGCGCGGCAGGATCCCCGCTGCAGCATCACCAAATGCAGACTCAACACCTAACCACCATGAGCAGTGTGCAGGagtccaaCACTTGCTGGAGGTGTCAGAATGAAACAGGTTTTCAGATAAATCTGTCTGGTGCTCCTCAAAGTAAACGCAAAGCACTAAAGCTAAACTTTGCTAATCCTCCGATTAAACCGAATGCAAGACTTCCCATCGCATCAGCCAACCCTTCCTTCCATAATCCACACATagagagactgcGCAATCACAGTATTGAGTCATGTGGGAAACTGAAGATTTCTCCTGAGCAGCATTGGGACTTCACTGCCGAAGACCTGAAGGACCTGGGCGAGATTGGCCGAGGAGCCTACGGCTCGGTCAACAAAATGGTTCATAAGCCCAGTGGTCAGATCATGGCTGTTAAGAGGATTCGTTCCACTGTTGATGAAAAAGAACAGAAGCAGCTGCTCATGGATTTAGACGTGGTTATGAGGAGTAGTGACTGTCCCTATATCGTCCAATTTTATGGGGCTCTGTTCCGAGAGGGTGACTGCTGGATATGTATGGAACTTATGTCTACCTCGTTCGACAAATTCTACAAATATGTATATTGCTCATTAGATGATGTCATTCCAGAGGAAATATTAGGCAAAATTACATTAGCGacTGTGAAAGCACTGAATCACTTGAAAGAAAActtgaaaataatccacagagACATCAAACCCTCCAACATTCTCCTGGATAGAAATGGCAACATAAAGCTGTGTGACTTTGGGATCAGTGGACAGTTGGTTGACTCTATAGCCAAGACTAGAGATGCTGGATGCAGACCGTACATGGCTCCCGAAAGGATAGACCCTAGTGCTTCTAGGCAAGGCTATGATGTGCGCTCGGACGTTTGGAGTTTGGGAATTACGCTGTACGAGCTGGCCACCGGTCGCTTCCCATACCCCAAGTGGAACAGTGTGTTTGATCAGCTGACACAGGTGGTGAAGGGAGACCCTCCTCAACTAAGCAACTCAGAGGAGAGACAGTTTTCTCCCAAATTCATCAACTTTGTCAATCTCTGCCTTACAAAGGACGAGTCAAAAAGGCCAAAGTACAGGGAGCTTCTGAAGCACCCGTTCATTCTGATGTACGAGGAGAGAGTGGTGGACGTTGCCGGTTACGTGTGTAAAATTCTGGATGAAATCCCCGCCTCCCCCAGCTCTCCCATGTACGTCGACTGATAGCGTGTACGTTACCCGAATGCAATGTAACACGGCAGCCGTTTGGCGCAATGCATTGTCCTGTTTCACGGTTCCACACTGCTTTTAAGGATCGGCACTCCCAAAACATTGTGTGCAATAAGGATCGGCTTTTCATCTTCAAAACCATTAGTGTATTGGTCTATAAAACAAGATAGAAcaataagaagaataagaacaataataattttatttgaggtgtgatatttattttaatgccaCATGTAAATGTTTAGCTGAGCGCATTATAGAAAATTAGAACAAGACTTGAACTCCTTCATTCAAGACACACTTCATGTTCACGGGAACGTAAATATCTACTTGAAAGTGATGATACaaacaacaagaacaagaaaTTGCTGAAACAAGAAGTCATTGCTATTCAAATAGAAAGAAAACGCCTACCATGTTGTATACCGTATAACATTTCTATGATAGGACGTGTCATTTAGAGCAATATCTGTAGGTGTAAAGCACAGTTTAATTGTGGTCTCACTTTCCGAAAGAGTATGCAGAAGTATTGTTGTTCGTCAAAGAAtccgttaaaaaaaaagtggttggATCATTTCTTCTACACGTTTCGCTCCACACATAGCAGTCTTTGTGAAATTCCAACATTTCATCTGAAAGATTTGTGACATGTTAACTTTGTGGAAAAGACACAGATGACACTTAGTCTGGTACCATTTGACAGATCAGTTGGTCGgttgaaagattaaaaaacaaaacaaaacaaaaaaagtcatccTTAAAGTAGTTTTCTATAAATATGCAACTTTAACTCACCAAATTGtattgaatgaattaaaaaaaaaaaaaacctcttgcTGGTATAGTGTACACACTTGCAGACACTCCTAtcttactgtaaatgtaaaagttacGGTACACGTCCCAAAATCCTTAATGCTACTTTATATTTTGCCACTTCTCCTGAAATTGGCTCTGACATCTTGGCTTATGTGTGCATTCTGAAAGATGTTCAAATATCACTGTTTAGGTTACTcactttaaaagaaatgtacaaCACTTTGCCAAAGCAGTCTTTTACTAACTGACATAATAGGGCAACTGAAATATGACACTAGATAGCATTGAAAGACTTGGTAGAAAgaattcatttttgtgtgtttgtgtaaaatagAGATCATCTGACACACTTAAGATGCATCACTGACCTAAGAATGCTTAACTATACATCCTTTTTATGAGCATACCTTAATAAAGAAAATCCCAATTTTGAAAACAATCTTTCAACTGTACAAAATGGCACCATAgtagaatatttaatatttagaagGGAAAATATGGATTTTATGTAACGTTATATTGTATCGGTATAAAGAGTGGGAAATATCTTCAAGAATTGTTCACACTGTGAAAAGATTTTAAGTGTATACATTGTGAACAgcaatctgtttaaaaaaaaaaaaaaaaaatatgtaattagaGGATATGCAGGGATATTGCCTTATGTCTGCTTTTGGAGATATTAACCTCTGATGGTCTGAGCTATTTGTCTTCTTCACTTCACATATTTAAAGGATATTGATGAAACCTTAGTGTTCTTGTAGTAATGATGAGAGCTAAGTATCTGCCTGCAGGTCAGTTGTGATAAGGCTAGGATGTGATTGTGACCTTATCGagctatttttttctgtaaggtCTGGAAAACAAATGGACTGAATGCTAGAATAAATCCTATGAATTAGC

Function

symbol description
map2k4 Predicted to enable JUN kinase kinase activity. Involved in cellular response to mechanical stimulus. Predicted to be located in cytosol. Implicated in ovarian serous carcinoma; pancreatic cancer; and urinary bladder cancer. Biomarker of chronic obstructive pulmonary disease; invasive ductal carcinoma; and prostate carcinoma in situ.

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K04430 MAP2K4, MKK4; mitogen-activated protein kinase kinase 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914687.2 True 3279 mRNA 0.40 13 9142501 9156288

Neighbor

gene id symbol gene type direction distance location
adprm adprm coding upstream 3101 9135203 ~ 9139400 (+)
trnal-aag_6 NA coding upstream 34568 9107852 ~ 9107933 (+)
trnaa-ugc_7 NA coding upstream 34744 9107686 ~ 9107757 (+)
LOC113527360 LOC108274022,LOC108424857,LOC105888776,LOC107653912 coding upstream 51955 9040824 ~ 9090546 (+)
pts pts,LOC107081163 coding upstream 107331 9030252 ~ 9035170 (+)
trnad-guc_4 NA coding downstream 108486 9264774 ~ 9264845 (+)
trnad-guc_5 NA coding downstream 109975 9266263 ~ 9266334 (+)
trnar-ccu_4 NA coding downstream 353436 9509724 ~ 9509796 (+)
LOC113527682 LOC108273946 coding downstream 367068 9523356 ~ 9559377 (+)
plxdc1 LOC108274329,LOC108424883 coding downstream 449843 9606131 ~ 9627459 (+)
G193170 NA non-coding upstream 49254 9057399 ~ 9093247 (+)
G192858 NA non-coding upstream 224256 8918040 ~ 8918245 (+)
LOC117598667 NA non-coding upstream 540731 8596654 ~ 8601770 (+)
G192760 NA non-coding upstream 626567 8514382 ~ 8515934 (+)
G192737 NA non-coding upstream 754384 8310878 ~ 8388117 (+)
G193169 NA non-coding downstream 1871 9158159 ~ 9158568 (+)
G193168 NA non-coding downstream 3145 9159433 ~ 9184089 (+)
G193386 NA non-coding downstream 222985 9379273 ~ 9380115 (+)
G193390 NA non-coding downstream 229855 9386143 ~ 9386394 (+)
G193458 NA non-coding downstream 359633 9515921 ~ 9516139 (+)
G192484 ank3 other upstream 1514390 7605981 ~ 7628111 (+)
tfam tfam other upstream 1706129 7428545 ~ 7436372 (+)
asah2 asah2,LOC107598643 other upstream 2306118 6822740 ~ 6836383 (+)
LOC113527389 NA other upstream 2414110 6725321 ~ 6728391 (+)
G191581 NA other upstream 3159264 5969743 ~ 5983237 (+)
LOC113527534 dnah9 other downstream 112205 9268493 ~ 9357961 (+)
G193383 LOC108273473 other downstream 211955 9368243 ~ 9369915 (+)
trnaq-cug_13 NA other downstream 355881 9512169 ~ 9512401 (+)
trnaq-cug_14 NA other downstream 356272 9512560 ~ 9512631 (+)
mrpl58 mrpl58 other downstream 356496 9512784 ~ 9515616 (+)

Expression


Co-expression Network