adprm (adprm)


Basic Information

Item Value
gene id adprm
gene name adprm
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 9135203 ~ 9139400 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914689.2
CCATGAAGAAGAACCTGAAGCTGTCATTGCGAGTATGTCAGTGTTTCACCGCGGAATAAACGCGAAACTTCATCCTATTTAAGTAGAAACCTGTTCTGAATTAGTGTTGTCTAACATGCCTGTATTAGTACTATTAGTATAATATAGTGGTAATGTAAATATAGTTGTGTATACAATGGCAGTTGAGGTTTGTTTATGATCCAGCTTGTACAGCCGGCATGTTGTTTTCCATATATGGTCATTTCCACCTTTTCACCTgcacttcaattttttttaagtttctgcCGTGATCTAAACGCAAAACCTCAGAGAAGAGCTCAGATGGAGGACAAGGCGGCTCCTGCGTTCACGTTCGGCTtgattgctgatattcagtacgcTGATTTAAAGGACGGGTATAATTTTCACGGAACCCGGAAGCGTTATTACAGGAACAGCCTGCTCCTGCTGAGAAATGCCATCAGACACTGGAATGAAGAGGAAGTGAAGCCCAGCTTCATCCTGCAGCTTGGAGACATCATTGACGGCTTCAACAGCAAGCACGGTGCATCAGATAAAGCTCTGCGGAAGGTGATGGATCAATTCAGCAGATGCTCAGCTCAGGTTCATCATGTGTGGGGCAACCACGAGTTCTATAACTTCACCAGGAGTGCCCTGTTCTCCTCTGTTCTTAACAGTGAGGTcaaaggagaagaggagagagatgaCAGGATGGATCAGGTCTACGCTTACCATTTCAGCCCTGCTCCCCAGTTCAGATTTGTGGTCCTGGACGGTTATGATCTGAGTATCATCGGCCGGGAGGAATCGTGTGAGAAGTACAGTCAGTCGTTTGAGCTCATCAAGGAGCACAATCCTAATGAGGAACTTAATCAGCCTCCAGGCTTATTTCCGATGGATGGAAGGTTTGTGAAGTTCAACGGAGGATTCAGCCAAGATCAGCTCGACTGGCTGGATAGATTGTTGACTAGTGCtgatgagaaaagagaaaaggtcACGGTTGTGAGTCACCTTCCTGTTCATCCCTACTCCACTGACTCCATATGTCTCGCATGGAACTTTGATGAGATCCTTCCACTTCTGCAGTCTCACAAAAGCGTGGTATGTTTCATGGCTGGACATGACCATGATGGAGGTTACTGCGTAGATTCAGCCGGTATTCATCACCTCACGGTGGAGGGGGTTATTGAGACGCCTCCAGACTGTGATGCTTTTGgcactgtgtatgtatatgaggACAAGATGATCCTCAGAGGTAACGGGAGGATAAAGGACAGAGTGCTTATGTATCGATGAGGCAAGGGAAATATGTTTACTATAgcagaaatatttttgtgtatacttatactgtaatatttatttaactgacaTCAAATAATTCAtcaaatcattattttattgcaaatatttaaaaaataatcttgaAACACTTAAAGAATATTGTAACTTAAAGTATTTTATGTgcagaataaatattttactaattta
>XM_034309073.1
TGCTAAATGCAGAAACTCCATGAAGAAGAACCTGAAGCTGTCATTGCGAtttctgcCGTGATCTAAACGCAAAACCTCAGAGAAGAGCTCAGATGGAGGACAAGGCGGCTCCTGCGTTCACGTTCGGCTtgattgctgatattcagtacgcTGATTTAAAGGACGGGTATAATTTTCACGGAACCCGGAAGCGTTATTACAGGAACAGCCTGCTCCTGCTGAGAAATGCCATCAGACACTGGAATGAAGAGGAAGTGAAGCCCAGCTTCATCCTGCAGCTTGGAGACATCATTGACGGCTTCAACAGCAAGCACGGTGCATCAGATAAAGCTCTGCGGAAGGTGATGGATCAATTCAGCAGATGCTCAGCTCAGGTTCATCATGTGTGGGGCAACCACGAGTTCTATAACTTCACCAGGAGTGCCCTGTTCTCCTCTGTTCTTAACAGTGAGGTcaaaggagaagaggagagagatgaCAGGATGGATCAGGTCTACGCTTACCATTTCAGCCCTGCTCCCCAGTTCAGATTTGTGGTCCTGGACGGTTATGATCTGAGTATCATCGGCCGGGAGGAATCGTGTGAGAAGTACAGTCAGTCGTTTGAGCTCATCAAGGAGCACAATCCTAATGAGGAACTTAATCAGCCTCCAGGCTTATTTCCGATGGATGGAAGGTTTGTGAAGTTCAACGGAGGATTCAGCCAAGATCAGCTCGACTGGCTGGATAGATTGTTGACTAGTGCtgatgagaaaagagaaaaggtcACGGTTGTGAGTCACCTTCCTGTTCATCCCTACTCCACTGACTCCATATGTCTCGCATGGAACTTTGATGAGATCCTTCCACTTCTGCAGTCTCACAAAAGCGTGGTATGTTTCATGGCTGGACATGACCATGATGGAGGTTACTGCGTAGATTCAGCCGGTATTCATCACCTCACGGTGGAGGGGGTTATTGAGACGCCTCCAGACTGTGATGCTTTTGgcactgtgtatgtatatgaggACAAGATGATCCTCAGAGGTAACGGGAGGATAAAGGACAGAGTGCTTATGTATCGATGAGGCAAGGGAAATATGTTTACTATAgcagaaatatttttgtgtatacttatactgtaatatttatttaactgacaTCAAATAATTCAtcaaatcattattttattgcaaatatttaaaaaataatcttgaAACACTTAAAGAATATTGTAACTTAAAGTATTTTATGTgcagaataaatattttactaattta

Function

symbol description
adprm Enables 2',3'-cyclic-nucleotide 2'-phosphodiesterase activity; manganese ion binding activity; and pyrophosphatase activity. Orthologous to human ADPRM (ADP-ribose/CDP-alcohol diphosphatase, manganese dependent).

NR:

description
manganese-dependent ADP-ribose/CDP-alcohol diphosphatase

GO: NA

KEGG:

id description
K01517 ADPRM; manganese-dependent ADP-ribose/CDP-alcohol diphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914689.2 True 1488 mRNA 0.43 3 9135220 9139400
XM_034309073.1 False 1259 mRNA 0.44 4 9135203 9139400

Neighbor

gene id symbol gene type direction distance location
trnal-aag_6 NA coding upstream 27270 9107852 ~ 9107933 (+)
trnaa-ugc_7 NA coding upstream 27446 9107686 ~ 9107757 (+)
LOC113527360 LOC108274022,LOC108424857,LOC105888776,LOC107653912 coding upstream 44657 9040824 ~ 9090546 (+)
pts pts,LOC107081163 coding upstream 100033 9030252 ~ 9035170 (+)
LOC113527204 glp2r coding upstream 109644 9013653 ~ 9025559 (+)
map2k4b map2k4,LOC108274195,LOC108424869,LOC107556463,LOC107719678,LOC108433489 coding downstream 3101 9142501 ~ 9156288 (+)
trnad-guc_4 NA coding downstream 125374 9264774 ~ 9264845 (+)
trnad-guc_5 NA coding downstream 126863 9266263 ~ 9266334 (+)
trnar-ccu_4 NA coding downstream 370324 9509724 ~ 9509796 (+)
LOC113527682 LOC108273946 coding downstream 383956 9523356 ~ 9559377 (+)
G193170 NA non-coding upstream 41956 9057399 ~ 9093247 (+)
G192858 NA non-coding upstream 216958 8918040 ~ 8918245 (+)
LOC117598667 NA non-coding upstream 533433 8596654 ~ 8601770 (+)
G192760 NA non-coding upstream 619269 8514382 ~ 8515934 (+)
G192737 NA non-coding upstream 747086 8310878 ~ 8388117 (+)
G193169 NA non-coding downstream 18759 9158159 ~ 9158568 (+)
G193168 NA non-coding downstream 20033 9159433 ~ 9184089 (+)
G193386 NA non-coding downstream 239873 9379273 ~ 9380115 (+)
G193390 NA non-coding downstream 246743 9386143 ~ 9386394 (+)
G193458 NA non-coding downstream 376521 9515921 ~ 9516139 (+)
G192484 ank3 other upstream 1507092 7605981 ~ 7628111 (+)
tfam tfam other upstream 1698831 7428545 ~ 7436372 (+)
asah2 asah2,LOC107598643 other upstream 2298820 6822740 ~ 6836383 (+)
LOC113527389 NA other upstream 2406812 6725321 ~ 6728391 (+)
G191581 NA other upstream 3151966 5969743 ~ 5983237 (+)
LOC113527534 dnah9 other downstream 129093 9268493 ~ 9357961 (+)
G193383 LOC108273473 other downstream 228843 9368243 ~ 9369915 (+)
trnaq-cug_13 NA other downstream 372769 9512169 ~ 9512401 (+)
trnaq-cug_14 NA other downstream 373160 9512560 ~ 9512631 (+)
mrpl58 mrpl58 other downstream 373384 9512784 ~ 9515616 (+)

Expression


Co-expression Network