g6pc3 (g6pc3)


Basic Information

Item Value
gene id g6pc3
gene name g6pc3
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 5256264 ~ 5265357 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914728.2
tagtgttaaaataaaacgaTACTTCTACTCAAAACATCACTCATAAAGACAGGTTTGGGCTCATtttcttgaagggtgccaataattctggagctgacagTTTCTGTGGTCTTACAATCAGCACTAGCTATATTTCAGCATTTCGCGTTTTCGTTTTTGTAAGTCCCTTGCCGGCATCCGTAACGAAAAAGTAAACAGATGCTGACTGTAACTTTTCTACCGGCGGATTCGTTAGCAGTAGCATTAGCATGAGCATTAGCATGAGCATTGTTGTCAAGATGTGTGTGAGGAACCCGAGTGTTAAATATTCGCCCtagttgttttcttttgaaCCTGAGCATCATATCTGTCCTACAGTGTTCCTGCTGCTCGTTAGCCCCGGCTACATCACTTAGCAAGCTAGCTCTCTTGTGCTCTGATGCTAATCAGTAGGATTCAGTGAAATGGAGATAGTCTACACTCAAGGCATTTGGATGGCTGAGCTTCTTCAGTCAAACACCAGAAAGTATGAATCTTTCTGGCTGCTCGTTACTCATATGGGAGACCCAAAAGCGGCGTTCCTGCTCGTTTTCCCACCCGTTTTCTACCTGCACAGACGAACAGGCATCGCCATCCTCTGGGTGGCTGCTGTATCAGAGTGGCTTAATCTTCTCTTTAAATGGGTCCTGTTTGGGGAAAGGCCTTACTGGTGGATAGGTCAGTCGGGTTTATTTGTGAAAAACAGCCCTTCGGTCCAGCAGTTCCAGTCCACCTGTGAGACAGGACCAGGCAGTCCCTCAGGCCATGCCATGGTCACCGCTGCAGTCTGGTGGGTGGCGGTGTCCGCCCTGGCCTCCTTTCTTCACGCTCGCTCTGGCAGTAAGATACTGGCTGCGGTACCGTACGTCTTCTACACGCTGCTGCTGGGAGCAGTTGGTCTGTCTCGGGTCTTCATTTTGGCTCATTTTCCGCACCAGGTCATCGCTGGCGTTCTGACAGGCATGATGCTGGGAGTGTTTTTAAACCGCACAGTGCCAGATTGTCGCCCCCTGCTGTTCTTCCTGTGCTCCAGCATGGCTCTGCTGTTCGGAGCACTGCTCATGCATGCTGTGCTGAAGAAGGTTGGCATCGACCTCGCCTGGTCTATTGCGTTGGCCAAGAGATGGTGCTCTAAGTCTGAGTGGGTTCGCATGGACACAAATCCTTTCTCCTCTCTGAGCCGTGATGCTGGCGCGCTGCTCGGGCTGGGGCTTGCCCAGTTCTGGAAGCCGGGAGGATGGGTACTTCCCTGGGTGCCAAAGACCCTCTGCATGGCGCTGTCCTCCATGGCCCTGTACCACGTGAGCCGGTTCCCTCTGCCTACAGCTCCAGCCCTCCTCTTTTACTCACTCTTTTTCCTCAAATATGTCATAGTGCCCCAGGTAGTGATGGTGCTAGTACCTGGCCTGGTGCATCTCCTCACAGCCAAACCCAAGAGGGACTGAgaagaatgaacagaatgacTTTTAACCTCTGTATGGAGTCAAAAATTGCCACCGAAGGTAGTGTATTGACAAATGGCTGTTCCAGGACCATCACATTAGTTGTCACAAGGCTAGCTGTTTATTCTACAGGTATCATTCCATATTGAGAAGAATGACAATTTTCATATTGTCCACtaaatttgttttgttctgtcaAAATGTTCTGTCCAattcaaacactgattttttttcacactgatttttttttttttaataaacggTAGTAATATGTCCCAGACAGAATAATAAAGCAATATTTATAATGAAGACGTTAAATGTATACAGGGAATATGCCCTGAGAAAACATTCCTTCTTGAGTAATCCCAATCGTGAGCAGTCTGCATGTTTGCAGTTCCATTATAAGCAATAATTCTGCTATTGTTTTTGACCTTGTCAGGATTTTCTTAAGTctaaatactgtatgtgcttACATATAAAATGTTTGATCATTCATCTTGATGGGGAAATGCTGGTTAACAGGTTGCTGTTGGTGCAAGGTCACAGAAGTGCACAGTTTAGTTGATTCTTGGCAAATCAACCACTGGATAGCAATTTTGTTGGAATGTCACCTGAAAGAAGCCCTTCCTAAGAACAGCACACAATTTGCAGCTCCTGAACTCCATTGAAAATTGAGTGCTGCAGACCAAAGTCAAACTTTCTGATCATGAGCAACATCAGCATGTATAAGCAAAGGTCCCTAGCCTAAAATGTGGTGGATCATTGGTGCTGTGGGGCTGATTTGTGGCTAGTGATCTAAGGGCCCTTAATGCCATCATTAATTCTGCTGCGTACTGGgacattttaatgcaaaatctgGTTGTCTGGTTGAAGTTATGACTTGAACATTCAACAATTCAACTATTGTGTACAGTATTTCATTATTGCTATTACATACATGTTCTCTCTTCATGTAACAGTGGGACATGCAAACCGACTTGACTGTAAAGGCCTTTTATTCTCCTGTTGTTAAGAGAATGAGACAAAACGTAAACGGTGTTTTGCAGTGGCCGTCTGTTTAGCACCCTTCAACAGAGGTAATACAATGGCAActccattaaaaataatatgtaaCCTTACAGGAAGATGAGTCAGTCTAAATGCCATATCAAGCAGAATTGCAGACATTGAGGCCTTTTTGTGTGTTCATAAcacaaaggaaaaataaagtcaTAGCATTGGCCCGAtatattattggcatttttGTGGCAGTAATAGGGAGAATAAAGGTATTATTGTAAAAAGGGCCTCCAGGCTGGACCCAATTGAATACCAGTGATGTGAATTGATGGTGTCCATATGCACAAGCCTAAGAATACAAAGGAGTTTAAAAAGGTGCATCACGGAGGATTCAAGATTCTCTACATGTGTCTCAAACTTTGTAGAAATTGTACTGCTTTAAAAGGTTATGCTTGAAAAAAgaattgtattaaaataatactaCACAGTATCAAATGTATGACTTAAAACACCATTAACTGTATGTGTTACTCATTTCATATAAtaatttctgctcattttcaGAATAATTTTGAAGTTGACTGTATCACAGTTATTTGCAGTATGATTAAACACATAGTCACAGA

Function

symbol description
g6pc3 Predicted to enable glucose-6-phosphatase activity. Acts upstream of or within hematopoietic progenitor cell differentiation. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in membrane. Is expressed in ventral wall of dorsal aorta. Human ortholog(s) of this gene implicated in severe congenital neutropenia 4. Orthologous to human G6PC3 (glucose-6-phosphatase catalytic subunit 3).

NR:

description
glucose-6-phosphatase 3

GO:

id name namespace
GO:0006094 gluconeogenesis biological_process
GO:0016311 dephosphorylation biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004346 glucose-6-phosphatase activity molecular_function

KEGG:

id description
K01084 G6PC; glucose-6-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914728.2 True 3085 mRNA 0.43 6 5256264 5265357

Neighbor

gene id symbol gene type direction distance location
pagr1 pagr1 coding downstream 257932 4991942 ~ 4998332 (-)
trnap-agg_4 NA coding downstream 338377 4917816 ~ 4917887 (-)
trnap-ugg_13 NA coding downstream 340688 4915505 ~ 4915576 (-)
trnap-ugg_12 NA coding downstream 341878 4914316 ~ 4914386 (-)
trnap-ugg_11 NA coding downstream 343067 4913126 ~ 4913197 (-)
tmem101 tmem101 coding upstream 24355 5289712 ~ 5294398 (-)
trnai-uau_5 NA coding upstream 36756 5302113 ~ 5302205 (-)
LOC113527073 LOC108274342,LOC108274341 coding upstream 46887 5312244 ~ 5322475 (-)
sgca LOC108273949,LOC108444285 coding upstream 139825 5405182 ~ 5416607 (-)
lrrc45 lrrc45,LOC107736618 coding upstream 181115 5446472 ~ 5456359 (-)
G190885 NA non-coding downstream 505387 4701104 ~ 4750877 (-)
G190849 NA non-coding downstream 589693 4666312 ~ 4666571 (-)
G190829 NA non-coding downstream 659441 4596539 ~ 4596823 (-)
G190821 NA non-coding downstream 680734 4573682 ~ 4575530 (-)
G190742 NA non-coding downstream 967461 4288417 ~ 4288803 (-)
G191279 LOC108273947,LOC107720033,LOC107689922,LOC107561997,LOC107693674 non-coding upstream 117638 5382995 ~ 5387137 (-)
G191413 NA non-coding upstream 177605 5442962 ~ 5445167 (-)
G191424 NA non-coding upstream 217263 5482620 ~ 5484667 (-)
G191463 NA non-coding upstream 400816 5666173 ~ 5667846 (-)
G191464 NA non-coding upstream 402527 5667884 ~ 5669753 (-)
LOC113527048 LOC108274181 other downstream 192846 5059498 ~ 5063418 (-)
G191056 taok2,LOC108273910 other downstream 303405 4949163 ~ 4952859 (-)
trnap-cgg_3 NA other downstream 337287 4911734 ~ 4918977 (-)
ndufa4 ndua4,ndufa4,LOC108443163,LOC103023526,LOC107745684,LOC107684782,LOC107569184 other downstream 2400771 2852055 ~ 2855493 (-)
LOC117598559 NA other downstream 2428512 2793046 ~ 2827752 (-)
gdpd3b gdpd3 other upstream 219334 5484691 ~ 5490925 (-)
G191430 NA other upstream 345763 5611120 ~ 5613954 (-)
LOC113527291 LOC108274042 other upstream 503171 5768528 ~ 5791270 (-)
itga3b itga3 other upstream 1281584 6546941 ~ 6594390 (-)
ipmkb ipmk other upstream 2134643 7400000 ~ 7418378 (-)

Expression


Co-expression Network