st6galnac


Basic Information

Item Value
gene id st6galnac
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 18281479 ~ 18290560 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914769.2
cttttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagtgtgtggacCTCACAGTGCAAGTTGGATTGCTTTTCTGTCTACTAGGCTGTGTCTGACAGGAATTTCATCTCTAAAGCAGCACCTGCTTCCCCGGGTTATCATCACACTAATGAGGAGAAGACAGCACTGCACTTTCCTGCTTCACTCCTCAAAATCCTGATTTGATTGGCTGTTTCACCTGCCCTATGACAGTCCTTGTGACCTTTGCAGGATGATAATTTTGCGGCATCAGAAGAAGCTTGTGTTGTTCTTCCCGGTTTTGTGCTTTGTGGCCTGGTTCTACCTACTGGGCTTGAAGAGTGGTCATCAGAGCAGattACAGGACTCCAAAGGATACATGAACTACTTTTTTTCTTGGCATGATCTGTGGTCTCTCAACCCTCTCTTTAATATGGGAAATAAAAAAGGACAGATAAAAGACCGACTTACAAACTCCAATGACAGAGTAGTGGGTGTTCATTCAAATGCAACCAAAAAAACTTGGATCGAAATGGTGCGCCAACCTGATGATTCTCCAGTGGACCCTTTTAATCCAGAACTAGACTTCTTGGGAGACAAATATGCAATCGATGATTATATGCTACAAACTAGATGTCCTAGCAGCATCCGTAAAAAGGTGTTGCAGACTGACTTTGCTAAGATGTTCTTGTCCAGTGTGCCAGTCCTGCAGTGGGCGAAGCATTTCTCTAAGGCAGAATATGAGCGGTTATCCCACTACCGTGGTGCCCACGGATGGGGTAGTGTCAGTGTTGATGttttgaATGAATCTCTGGCCATCTTAAACACTTCTGCAAACCGGCTGATGTTTGACGACTGGGAGAAGAGCAAGAGCCGATCGCAGTGTATCCGCTGTGCTGTGGTTGGAAATGCAGGAATCCTGAATGGGTCAAAGAAAGGCCTGGAGATTGACAAGAACGACTACGTATTCAGgACAAATGGTGCAGTTATTAAAGGCTTTGAGGAGGATGTTGGCTCACGTACCTCTTTCTACACCTTCTCCACGAACACCTTTCGCAACTCTTTGAGAAGTTATGCACGTGTAGGCTATAAAAGTGCTCCACAGAGCAAGGAGACCAGGTACATTTTCCTGCCTGATCATGACCGGGACTATATTCTCATGAGAGCTGCATCCTTGCACATACCAATCACGAAAGGCAAAGACCAGAGTTCTAAGCCTCCCAAATATTTTGGATCTAATGTAACTGTAGAGAAGTTTAAAATGTACCACCCCGACTTCATCCGTTACCTCAGAAACAGGTTTCTGCATTCGGGCAGACTCAAAACCAAACTTAGAAACATCTACAGGCCGTCTACAGGAGCCGTGATGCTGCTGGCCGCGCTTCATACGTGTGACGAGGTGAATGCCTATGGATTTATGACACCAGACTACAAGAACTACTCAGACCATTATTACGACAAAATACATCACCAAGTACATTTCTACGCCAACCATGACCTGCGATTGGAGTTGAATCTGTGGCAGAAGCTGCACAAGGCAGGACTGATAAAGCTCTATATGCGAACATGATCCTAACTCTAACGAACCAAACTGGACTCTATGGCGTCTGATCCCGCTCAGGATTTGAGGATATGCTGCAGATAAAAATCTTGTGACATTTTATTACCTTTGGATTTGGCCTACTTCACCTAAACATAAGGGTAAAGGTAAAGGCAAGATTTATTTAAGATGTATTTATAAACTTTTTAAACTACATGACCTGTAAATCAGTTCAGGTACTGTGAAGTTACAGCTGGTGAAAATGGTGATGACCTTTTAACTGTGTTTAAAGGGCCAAGGTTCCTAAAAACTTGGTGAACATGTGTGACCTGTGTctgtgacctgtgtgtgtgtgtgcgtgtgttaaaTGAAGGAAGAACTGTGTGAGTGCGAGTTGTAATTCAGTACCTCAAGTTGTAGAATCACACTGATGAAGATTCTAATATAAAGTTTATACAagataatttatatatttgtggaAAATCTTTAATACTTTCATGCCAAGTAGGTAACCTTTTTAAGACAGGGAAAATATTATGAAGGCTATATGTGGATGATAGGGCTATAGACAGAAATAACAGCTGATGAAAATGTCAGAGTATATTTCCTTACACACATGCCAGGAGGTGAAGGGCTTCAACTAAGAGACACTTTTGCTtttcttgaggaaaaaaaaaaaaaaaaagactcgtTTTAA
>XM_026914770.2
cttttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagtgtgtggacCTCACAGTGCAAGTTGGATTGCTTTTCTGTCTACTAGGCTGTGTCTGACAGGAATTTCATCTCTAAAGCAGCACCTGCTTCCCCGGGTTATCATCACACTAATGAGGAGAAGACAGCACTGCACTTTCCTGCTTCACTCCTCAAAATCCTGATTTGATTGGCTGTTTCACCTGCCCTATGACAGTCCTTGTGACCTTTGCAGGATGATAATTTTGCGGCATCAGAAGAAGCTTGTGTTGTTCTTCCCGGTTTTGTGCTTTGTGGCCTGGTTCTACCTACTGGGCTTGAAGAGTGGTCATCAGAGCAGattACAGGACTCCAAAGGATACATGAACTACTTTTTTTCTTGGCATGATCTGTGGTCTCTCAACCCTCTCTTTAATATGGGAAATAAAAAAGGACAGATAAAAGACCGACTTACAAACTCCAATGACAGAGTAGTGGGTGTTCATTCAAATGCAACCAAAAAAACTTGGATCGAAATGGTGCGCCAACCTGATGATTCTCCAGTGGACCCTTTTAATCCAGAACTAGACTTCTTGGGAGACAAATATGCAATCGATGATTATATGCTACAAACTTGTGCCAGTCCTGCAGTGGGCGAAGCATTTCTCTAAGGCAGAATATGAGCGGTTATCCCACTACCGTGGTGCCCACGGATGGGGTAGTGTCAGTGTTGATGttttgaATGAATCTCTGGCCATCTTAAACACTTCTGCAAACCGGCTGATGTTTGACGACTGGGAGAAGAGCAAGAGCCGATCGCAGTGTATCCGCTGTGCTGTGGTTGGAAATGCAGGAATCCTGAATGGGTCAAAGAAAGGCCTGGAGATTGACAAGAACGACTACGTATTCAGgACAAATGGTGCAGTTATTAAAGGCTTTGAGGAGGATGTTGGCTCACGTACCTCTTTCTACACCTTCTCCACGAACACCTTTCGCAACTCTTTGAGAAGTTATGCACGTGTAGGCTATAAAAGTGCTCCACAGAGCAAGGAGACCAGGTACATTTTCCTGCCTGATCATGACCGGGACTATATTCTCATGAGAGCTGCATCCTTGCACATACCAATCACGAAAGGCAAAGACCAGAGTTCTAAGCCTCCCAAATATTTTGGATCTAATGTAACTGTAGAGAAGTTTAAAATGTACCACCCCGACTTCATCCGTTACCTCAGAAACAGGTTTCTGCATTCGGGCAGACTCAAAACCAAACTTAGAAACATCTACAGGCCGTCTACAGGAGCCGTGATGCTGCTGGCCGCGCTTCATACGTGTGACGAGGTGAATGCCTATGGATTTATGACACCAGACTACAAGAACTACTCAGACCATTATTACGACAAAATACATCACCAAGTACATTTCTACGCCAACCATGACCTGCGATTGGAGTTGAATCTGTGGCAGAAGCTGCACAAGGCAGGACTGATAAAGCTCTATATGCGAACATGATCCTAACTCTAACGAACCAAACTGGACTCTATGGCGTCTGATCCCGCTCAGGATTTGAGGATATGCTGCAGATAAAAATCTTGTGACATTTTATTACCTTTGGATTTGGCCTACTTCACCTAAACATAAGGGTAAAGGTAAAGGCAAGATTTATTTAAGATGTATTTATAAACTTTTTAAACTACATGACCTGTAAATCAGTTCAGGTACTGTGAAGTTACAGCTGGTGAAAATGGTGATGACCTTTTAACTGTGTTTAAAGGGCCAAGGTTCCTAAAAACTTGGTGAACATGTGTGACCTGTGTctgtgacctgtgtgtgtgtgtgcgtgtgttaaaTGAAGGAAGAACTGTGTGAGTGCGAGTTGTAATTCAGTACCTCAAGTTGTAGAATCACACTGATGAAGATTCTAATATAAAGTTTATACAagataatttatatatttgtggaAAATCTTTAATACTTTCATGCCAAGTAGGTAACCTTTTTAAGACAGGGAAAATATTATGAAGGCTATATGTGGATGATAGGGCTATAGACAGAAATAACAGCTGATGAAAATGTCAGAGTATATTTCCTTACACACATGCCAGGAGGTGAAGGGCTTCAACTAAGAGACACTTTTGCTtttcttgaggaaaaaaaaaaaaaaaaagactcgtTTTAA
>XM_034309219.1
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagtgtgtggacCTCACAGTGCAAGTTGGATTGCTTTTCTGTCTACTAGGCTGTGTCTGACAGGAATTTCATCTCTAAGATGATAATTTTGCGGCATCAGAAGAAGCTTGTGTTGTTCTTCCCGGTTTTGTGCTTTGTGGCCTGGTTCTACCTACTGGGCTTGAAGAGTGGTCATCAGAGCAGattACAGGACTCCAAAGGATACATGAACTACTTTTTTTCTTGGCATGATCTGTGGTCTCTCAACCCTCTCTTTAATATGGGAAATAAAAAAGGACAGATAAAAGACCGACTTACAAACTCCAATGACAGAGTAGTGGGTGTTCATTCAAATGCAACCAAAAAAACTTGGATCGAAATGGTGCGCCAACCTGATGATTCTCCAGTGGACCCTTTTAATCCAGAACTAGACTTCTTGGGAGACAAATATGCAATCGATGATTATATGCTACAAACTAGATGTCCTAGCAGCATCCGTAAAAAGGTGTTGCAGACTGACTTTGCTAAGATGTTCTTGTCCAGTGTGCCAGTCCTGCAGTGGGCGAAGCATTTCTCTAAGGCAGAATATGAGCGGTTATCCCACTACCGTGGTGCCCACGGATGGGGTAGTGTCAGTGTTGATGttttgaATGAATCTCTGGCCATCTTAAACACTTCTGCAAACCGGCTGATGTTTGACGACTGGGAGAAGAGCAAGAGCCGATCGCAGTGTATCCGCTGTGCTGTGGTTGGAAATGCAGGAATCCTGAATGGGTCAAAGAAAGGCCTGGAGATTGACAAGAACGACTACGTATTCAGgACAAATGGTGCAGTTATTAAAGGCTTTGAGGAGGATGTTGGCTCACGTACCTCTTTCTACACCTTCTCCACGAACACCTTTCGCAACTCTTTGAGAAGTTATGCACGTGTAGGCTATAAAAGTGCTCCACAGAGCAAGGAGACCAGGTACATTTTCCTGCCTGATCATGACCGGGACTATATTCTCATGAGAGCTGCATCCTTGCACATACCAATCACGAAAGGCAAAGACCAGAGTTCTAAGCCTCCCAAATATTTTGGATCTAATGTAACTGTAGAGAAGTTTAAAATGTACCACCCCGACTTCATCCGTTACCTCAGAAACAGGTTTCTGCATTCGGGCAGACTCAAAACCAAACTTAGAAACATCTACAGGCCGTCTACAGGAGCCGTGATGCTGCTGGCCGCGCTTCATACGTGTGACGAGGTGAATGCCTATGGATTTATGACACCAGACTACAAGAACTACTCAGACCATTATTACGACAAAATACATCACCAAGTACATTTCTACGCCAACCATGACCTGCGATTGGAGTTGAATCTGTGGCAGAAGCTGCACAAGGCAGGACTGATAAAGCTCTATATGCGAACATGATCCTAACTCTAACGAACCAAACTGGACTCTATGGCGTCTGATCCCGCTCAGGATTTGAGGATATGCTGCAGATAAAAATCTTGTGACATTTTATTACCTTTGGATTTGGCCTACTTCACCTAAACATAAGGGTAAAGGTAAAGGCAAGATTTATTTAAGATGTATTTATAAACTTTTTAAACTACATGACCTGTAAATCAGTTCAGGTACTGTGAAGTTACAGCTGGTGAAAATGGTGATGACCTTTTAACTGTGTTTAAAGGGCCAAGGTTCCTAAAAACTTGGTGAACATGTGTGACCTGTGTctgtgacctgtgtgtgtgtgtgcgtgtgttaaaTGAAGGAAGAACTGTGTGAGTGCGAGTTGTAATTCAGTACCTCAAGTTGTAGAATCACACTGATGAAGATTCTAATATAAAGTTTATACAagataatttatatatttgtggaAAATCTTTAATACTTTCATGCCAAGTAGGTAACCTTTTTAAGACAGGGAAAATATTATGAAGGCTATATGTGGATGATAGGGCTATAGACAGAAATAACAGCTGATGAAAATGTCAGAGTATATTTCCTTACACACATGCCAGGAGGTGAAGGGCTTCAACTAAGAGACACTTTTGCTtttcttgaggaaaaaaaaaaaaaaaaagactcgtTTTAA

Function

NR:

description
PREDICTED: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 isoform X2

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008373 sialyltransferase activity molecular_function

KEGG:

id description
K06616 SIAT7B, ST6GalNAc II; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7B)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914769.2 True 2266 mRNA 0.43 10 18281479 18290560
XM_026914770.2 False 2201 mRNA 0.43 10 18281479 18290560
XM_034309219.1 False 2106 mRNA 0.42 10 18281503 18290560

Neighbor

gene id symbol gene type direction distance location
LOC113527195 NA coding upstream 9969 18258971 ~ 18271510 (+)
cep131 cep131,LOC107755458,LOC107690939 coding upstream 27060 18227382 ~ 18254419 (+)
rnf213b LOC108273713 coding upstream 54667 18185338 ~ 18226812 (+)
nploc4 nploc4,LOC107561846,LOC107684105,LOC107690944,LOC107755457,LOC107601397 coding upstream 102422 18167814 ~ 18179057 (+)
oxld1 NA coding upstream 128389 18150491 ~ 18153090 (+)
aatkb LOC108273714 coding downstream 9666 18300226 ~ 18348357 (+)
LOC113527495 LOC108273717 coding downstream 130993 18421553 ~ 18429688 (+)
bnip3 bnip3,LOC107553688,LOC107653114,LOC107582186,LOC107706607 coding downstream 207685 18498245 ~ 18507858 (+)
LOC113527622 tcerg1l coding downstream 323631 18614191 ~ 18702757 (+)
ebf3a ebf3,ebf3a,LOC107582179,LOC107553694,LOC107745698 coding downstream 537076 18827636 ~ 18920766 (+)
G198282 NA non-coding upstream 103963 18161674 ~ 18177516 (+)
LOC117598699 NA non-coding upstream 114103 18162718 ~ 18167376 (+)
G198279 NA non-coding upstream 142436 18138151 ~ 18139043 (+)
G198213 NA non-coding upstream 296011 17985163 ~ 17985468 (+)
G198177 NA non-coding upstream 343708 17937532 ~ 17937771 (+)
G198311 NA non-coding downstream 58404 18348964 ~ 18349413 (+)
G198722 NA non-coding downstream 127523 18418083 ~ 18419984 (+)
G198767 NA non-coding downstream 235108 18525668 ~ 18531296 (+)
G198818 NA non-coding downstream 389613 18680173 ~ 18698503 (+)
G198876 NA non-coding downstream 412915 18703475 ~ 18703699 (+)
pde6gb pde6g,LOC102781464,LOC103367935,LOC102221623 other upstream 121393 18155145 ~ 18160086 (+)
mta3 LOC108273982,LOC108430512,LOC107582777,LOC107728718,LOC107698822 other upstream 709414 17545793 ~ 17572065 (+)
anapc16 anapc16,cj104 other upstream 1417984 16855689 ~ 16863495 (+)
qki2 qki2,LOC108426533,LOC108274051,LOC103029551,LOC107690925,LOC107755469 other upstream 3957198 14287359 ~ 14324281 (+)
tha1 LOC108274193,LOC108426437,LOC102310306,LOC107683136,LOC107722240,LOC107581676 other upstream 4247336 14013573 ~ 14034143 (+)
G198737 ppp2r2d,LOC107706599,LOC107653113,LOC107582184,LOC107553689 other downstream 151326 18441886 ~ 18510159 (+)
si:ch211-221j21.3 LOC108273429 other downstream 515517 18806077 ~ 18812262 (+)
LOC113527713 fam196a other downstream 1236082 19526642 ~ 19566684 (+)
si:ch211-216b21.2 LOC108273439,LOC107082319,LOC108429207,LOC107704231,LOC105932487,LOC108246656,LOC108274355,LOC102229454,LOC106946734 other downstream 3166831 21457391 ~ 21500929 (+)
G200571 NA other downstream 3712264 22002824 ~ 22003274 (+)

Expression


Co-expression Network