mapk8b (mapk8b,LOC108274025,LOC108437314,LOC107388204,LOC108263675,LOC103040580)


Basic Information

Item Value
gene id mapk8b
gene name mapk8b,LOC108274025,LOC108437314,LOC107388204,LOC108263675,LOC103040580
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 4625598 ~ 4648676 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026915146.2
CAGCGGGCTCCTGGGTTTGCGGCTCAAAGCGGAAAATAACtggaatattaaaatattcccTTGTGTCTGCCCAGAGAAGGAATACAGCGTATTTGTCTTGACGCGGACCTTCTTGAATATCTCTGAGAGTatcTGGTGTCGTGGGATCTATTTGAATGCCCAGCACACAATTAACACGAATATCACCATGAATAGGAATAAGCGTGAGAAAGAGTATTACAGTATAGACGTCGGGGATTCCACATTCACCGTTCTGAAGCGCTACCAGAATTTAAGACCCATCGGCTCTGGAGCACAAGGCATCGTCTGctcgGCGTATGACCACATCTTGGAGAGAAATGTCGCTATTAAGAAACTCAGTCGACCCTTTCAGAACCAGACCCATGCCAAACGGGCGTACAGAGAGCTGGTGCTCATGAAGTGCGTCAACCACAAGAATATCATTGGACTCCTAAATGTATTCACGCCACAGAAAACACTTGAAGAATTTCAAGACGTTTACCTGGTCATGGAGCTGATGGATGCTAACCTGTGCCAGGTGATTCAGATGGAGTTGGACCACGAGCGACTCTCCTATCTGCTTTACCAGATGCTCTGTGGCATCAAGCATCTGCATGCAGCTGGCATTATACACAGGGACCTGAAGCCAAGCAACATTGTGGTGAAGTCAGACTGCACGTTGAAGATCCTGGATTTTGGCTTGGCTCGCACAGCTGCCACTGGGCTCCTCATGACCCCCTACGTGGTGACACGCTACTACCGTGCACCAGAGGTCATACTAGGCATGGGTTACCAGGCCAATGttGATGTCTGGTCTGTTGGCTGCATCATGGCCGAAATGGTCAGAGGCAGTGTGCTGTTTCCAGGCACTGATCATATTGACCAGTGGAATAAGGTGATCGAGCAGCTGGGCACGCCGTCTCAGGAGTTCATGATGAAGCTGAACCAGTCTGTAAGGACCTACGTGGAGAACAGACCCCGATATGCAGGGTACAGTTTTGAGAAGCTTTTCCCAGATGTTCTCTTCCCTGCTGACTCTGACCACAACAAACTCAAAGCGAGCCAGGCTCGAGACCTTCTGTCCAAAATGCTGGTTATAGATGCATCCAAGCGGATCTCTGTGGACGAGGCCCTGCAGCATCCCTACATCAATGTGTGGTATGATCCCAGTGAAGTTGAAGCGCCTCCACCGTTGATCACAGACAAGCAGCTGGATGAGAGGGAACACACTGTGGAGGAGTGGAAAGAGCTGATATATAAAGAGGTGCTGGACTGGGAGGAACGCTTCGAAAAATGGTGTAATCCTCATGGACAACCGGGCTTCAGTAGCACAGGTGCAGCAGTGACCAGCGGCTCCCAGCACAGCTCCACGTCCTCCTCGTCCTCCGTGTCCACCGTCCTCGCGCTGTCCTCAGAGACAGAAAGCAGCTTGGAGACTTtgttctcctcttcctccaccgGGCCAGTCGGCTGCTGCAGTTGACCATCACCCCATCCTTCTCACCTCCGTGACCTTCCTCCATCCGTTTTCAGACTGACTTCGTTTCTTTTCGGTCAGGGGAAAAAGTCAGAGTAAGGTGGGAGTTTTTAAAAGGCACCTTAAGAAGCTTTTACACCAAACCAGCGTTACTTTggtcgctttttttttttgtgggttgGGGGGGGGAACGACTTGATTTAGTGTCAGACTGAAACTACCGCTGCATCTCCTCAATGCCATGTTGTTCATTTGTAACGGTTGTACGGTAAATTTATATTTGAAGATGCTTTGAATTTCAAGATTGCTGTGAGCCAAGTTTATGGCAGTTTAGCAGAATGGCACATTGTGTTAAAGACTCAGCTCTGTCATTCTGTTACTGTTTTAGAGTTAAATACAATGCATCTTGAATGAATTTCCagaatatttgtttaataagcAAATATTACTTCAGAGTCTTTCTCGCATGACTTAATGCTGAGATCAGGTCATAGCGCATTTATTCGGTTCTTTcactattttacaaaaaaaaaattatttataataggCATTTTAACATACTTATTTTGTCCTCTCTTTTTTGGTTGATTTTGCTACAGGACTTTATAGATTAAATACATCCATACTGTACAGGTTTTGAGGTTAAAATCTAAACAGCAGTAAAGGGTAAATTAAaggttatattattattattattattattattaatttttttggtctttAGTGCTTTGTACCGCTTGGCCCTGGAATGTTGCAAGGCTCTTGTAAGGTGAACAGTTTGATGTAGAACATTTGTGAAACCCTATTTACAGTATAGGTCATGTCTCTAAATGGcacagtgcattctgggtattCTGTGCCTGCTAGAATGTGTCATTTGGACACTATCTATTGCAGGGCATTACAGGACTTTGTGAGTGCACGGGGTATTTTCCAGTAAGCTTTTAGTTATGACTCGAAATACAGGAAATACGGCGTTATTTCAGTGGAATGTATGAATAGCAGTATAGATAAGAAAGTAAGTTATGATTTGAAATTATATACGTACGTATATAATTGAATTATATACGTATATTCTACGTATATACGTAGTGACGTATTCTGTAAGATTATAAAAAGCTGTCTCACTCAGATATTTTGTTGGTAACGCTTTACATTAAGTGTCCATTTAGTGACATTATTTAATACACATTACTATGAACAAACCATAAACTCCAGCATTAATAATCCAATTAACGTTAACAATCGAAGTAATAACACTTGTATTAATTGATGCtatcttttaaataataaaccaaatattcaACACGTCCATTAATCAATGTTCTACCATCACTCAGTAAACTAAAGCCTACAGTGATGTGGGCAACATGAACATCACCTTAACGAACATGTGGTTGTTACCTGGGAGATTCAGAACGCAGGCTGAAAAGaaagttgtaatatttacaCCTGAACACCAGCGTTCAGTAAGTTCTGAACATTTAATAACATGCTGTAAGTGTTAACATTCTGCAGAAGTTTATGGTTTGTTAATGTTGATTAAagctgtaaataatgttagttaagggaaccttaatgAAAAGTGTTgccttactattattattattatttcatttttgtataggtgaatgttttttttttttttttttttttttttttttttcctaaaattcAGCACAACTCAATAACCTTGAATAACCAGCTTTTATTGCCCTTCGAGTAATTACATACCAGATTAATGTAATCGGCAGATCTGTGACTAGACTTGTATGCCTGCCTGTTGATGCAATGCAACCAAACAAAGCAAGTCAATGCTAAATCCTAAACCTGTATGCAATAGCGGTTTCCTTTTGGACTTGTTTTCATGTTCCTTATGAAAGTGCCTGTGTCATTCATTCTCAAACAGCTCATAAAACATGAAACTTCTTGGAAATTCCAGAGCAGATCACAGTTGGTATGATGTATGGAgtgtctatttttattttatttttttttatggatatGATCGATTCGAAGACTGTTGGAGTGATAGTGTGTCAGGTGTACCATGATTAACGTGACAGCCTTTGATTTCAGTAGGATAGTTTTAGCAAGCAGGATGTATAAAAGTAGTTAAATTGTAAATGTTCGTGGATGATAATTGTACAGTGTTTGGAGCTCAAAGTTTGAAGAAAAGCTAACGTTGATGTGGTGGTGATGGTCTTTGACATGGTGTTATAGAATGTAAAACGTCACGTTATTGAGGGTTTATGTATGTGGTGACTGGCAGGAAGCTGAATTGGAGATAATGCTGAATGGCCGGCCAACAAATTTTATGACTCTTTAATCATGTTACAGCACAGGTTTCTACACGTTTGCAGTTAGCTTTTCGttctttgttgtatttttgttctaAGTGCTCTTATTTCTTTGGCCTTCTTTCTGAAGGCAGCATCTGATGAATTTTTTGATGAAATTTCATCTTTTGATgaatttgcttttcttttacttCTTCAAATGTGATAGCGCAGTTACAATTCTATCACATTACAATGACATTATAATTCTAATTAAAGTACACATTGATCAACTACCTCACTCCAAATTTCTACAACTTCTTGGATATTTAGCTGCCCATTAGGTGTCCAGGATGTGTTAATACAAattccattatttatttatttgaacgTTTGtcaatagtaaaaaaaaacgtctagttttgtacagtatgtatatttCACGTAGAAGTAAAAGGACTGTAATGtaaatttttgttcttttttttttttttttttttttttaaacagttcatGTGCAATACCCTCTGCTCTGTGTGCTTACTCGTAAGTGTATCTAGCTACAGTATGTTAGCTGTATGTTCCCAAAGGTAGAGAAATGTTAGGTACtgtcaattcagttcagtttaattCAGCTAAAATGCAATGCTAAATTCATGAATTTggatctttatttttaattaagttCTCTGTGACAAGTTAATTTGTGTCACAAAAACTGATGATCTGGAACTAGACAGAGGTGTATGATTTACATGGCCAATGGATCATTCTAGTAAggctgaaagacaaaaaaaaaaaatccctaaaaGCCTACTTGTGTAAGCTGGTCTGTAATCTTTGCTAGCAATACTGGCAATGCAAAATCCTTACTCTGTGTGCTCCTTCCTGCATACAGACTATCAGAAGTGCACTACTAGAATAAATGCACTGGGATCTCACCAAGCCAATGTTAAAACATGTACTGCAAATAAATACTTCTGTTGGAATTA

Function

symbol description
mapk8b Predicted to enable JUN kinase activity. Involved in JNK cascade. Acts upstream of or within determination of dorsal identity. Predicted to be located in synapse. Predicted to be active in cytoplasm and nucleus. Is expressed in brain; gut; and pectoral fin. Human ortholog(s) of this gene implicated in abdominal aortic aneurysm; colorectal adenoma; rectal benign neoplasm; and type 2 diabetes mellitus. Orthologous to human MAPK8 (mitogen-activated protein kinase 8).

NR:

description
mitogen-activated protein kinase 8 isoform X2

GO: NA

KEGG:

id description
K04440 JNK; mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026915146.2 True 4748 mRNA 0.39 13 4625598 4648676

Neighbor

gene id symbol gene type direction distance location
LOC113527719 LOC108273413 coding downstream 67464 4550108 ~ 4558134 (-)
sox9a sox9 coding downstream 330358 4291951 ~ 4295240 (-)
LOC113527563 LOC108273452,LOC108437319 coding downstream 609285 4013847 ~ 4016313 (-)
sstr2a sstr2a,LOC108274330,LOC108437322,LOC103031004,LOC107726267,LOC107719927,LOC107653975,LOC107693649 coding downstream 620721 4000449 ~ 4004877 (-)
heatr1 heatr1,LOC107560530,LOC107675669,LOC102797743 coding downstream 653713 3938282 ~ 3971885 (-)
ubtd1b ubtd1,ubtd1b,LOC108437310 coding upstream 121868 4770544 ~ 4787576 (-)
zdhhc16b LOC108273908,LOC108444288 coding upstream 161976 4810652 ~ 4827352 (-)
fam20a fam20a coding upstream 189235 4837911 ~ 4849678 (-)
trnap-cgg_2 NA coding upstream 250098 4898774 ~ 4898845 (-)
trnap-agg_2 NA coding upstream 251290 4899966 ~ 4900037 (-)
G190829 NA non-coding downstream 28775 4596539 ~ 4596823 (-)
G190821 NA non-coding downstream 50068 4573682 ~ 4575530 (-)
G190742 NA non-coding downstream 336795 4288417 ~ 4288803 (-)
G190731 NA non-coding downstream 366844 4254493 ~ 4258754 (-)
G190656 NA non-coding downstream 464591 4159776 ~ 4161007 (-)
G190849 NA non-coding upstream 17636 4666312 ~ 4666571 (-)
G190885 NA non-coding upstream 52428 4701104 ~ 4750877 (-)
G191279 LOC108273947,LOC107720033,LOC107689922,LOC107561997,LOC107693674 non-coding upstream 734319 5382995 ~ 5387137 (-)
G191413 NA non-coding upstream 794286 5442962 ~ 5445167 (-)
G191424 NA non-coding upstream 833944 5482620 ~ 5484667 (-)
ndufa4 ndua4,ndufa4,LOC108443163,LOC103023526,LOC107745684,LOC107684782,LOC107569184 other downstream 1770105 2852055 ~ 2855493 (-)
LOC117598559 NA other downstream 1797846 2793046 ~ 2827752 (-)
LOC113547504 LOC108273577,LOC108273573 other downstream 1814207 2786081 ~ 2811391 (-)
smarcd2 smarcd2,LOC107569192,LOC107694073,LOC107684754 other downstream 2015825 2591237 ~ 2609773 (-)
LOC113547489 NA other downstream 2414619 2194344 ~ 2210979 (-)
trnap-cgg_3 NA other upstream 263058 4911734 ~ 4918977 (-)
G191056 taok2,LOC108273910 other upstream 300487 4949163 ~ 4952859 (-)
LOC113527048 LOC108274181 other upstream 410822 5059498 ~ 5063418 (-)
gdpd3b gdpd3 other upstream 836015 5484691 ~ 5490925 (-)
G191430 NA other upstream 962444 5611120 ~ 5613954 (-)

Expression


Co-expression Network