g6pca.1 (LOC108274343)


Basic Information

Item Value
gene id g6pca.1
gene name LOC108274343
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 6747052 ~ 6752732 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026915156.2
ATTACAGAGGGTGGAAAGGTCATGGACCCTGAAGACTCCTGGATACCGCAGAAGCCATGTAAACATGATGATCCAGCCTTGAATAAAGTCCAGCTGGAGGGGGCAAGTGAAATCTGAAAAGAGGTAAAACCATCAAGTCTGCATGCTTCAATCCGCATCATCTGTGCTTCAGTGATTGTGCTGGGCTAAGCGCCCTGCCTTTGCCGTCATTGAGTCATGGATCTGCTCCATAGTTGGGGGGTGAGTCTGGCAGTCTATTTGCAGAAAGAGTACATTGCCTATGAGAGTTGGTTTCAGCTGATTTCCTGTGTGGCGGATCTCCACACCaccttcttcatcttcttcccCATCTGGTTCCACCTGAAAAGGGATGTCGGCATCAAGCTCATCTGGGTGGGTGTGGTTGGGGACTGGCTTAACCTGGTGCTAAAATGGGTTCTTTTTGGAGAAAGGCCTTATTGGTGGGTTCATGAGACCAGGTTTTATGGCACTGAGTCAGCGCCTGCTCTCAGGCAGCTTCCCATCACATGTGAGACTGGACCAGGAAGTCCTTCTGGTCATGCGATGGGCTCTGCTGCAGTAGGATATGTGATGGTCACATCATTGCTATCCATTGCTGCTCAGAGAAAACCTCCTGCTTTGTTTTACTGTCTTTTACAGGTGGTGCTACTGATGCTGTTGGGGCTGGTGGAGCTGTTAGTCTGCACGTCTCGTGTTTACGTTGCTGCCCACTTCCCCCACCAGGTTATATGTGGAGTTATCTCAGGTATCATTGTAGCTGAGATATTCTCAAGACAGAGGTGGATTTACAACACCAACCTGCAGAGGTACTTCAGCATCACTCTGTTCCTGCTCATTTTTGCAGTGGGCTTTTATGTTCTCTTGAAGGCCGTGGGTGTGGATCTGCTGTGGACTCTGGAAAAAGCTCAGAAATGGTGTGTGAACCCGTCCTGGGTCCTCATGGACACGACACCATTTGCAAGCCTGATGCGCAACATGGGCACTTTGTTTGGTCTTGGCTTGGGCCTGCACTCACCACTCTATACCGACAGTAAGAACAGCACTAGCGCCCCTTTCAGAATAGTCTCTATTGCCATATCATTAGTTCTTCTGCAGATCCTGGACTTTTTGACCTTCCCTTCAGATAACCATACAATTTTTTACATTCTGTCATTCACAAAGAGCGTTGTTGCCATTTTAGTTCCCACCATACTTGTTCCTAGAGGTCTGTCCTTGTTTTTACaggaaaagaaagctgaaaaggcctcatagaaaaatatttaagtgTTTGACAATGGTGAATGATAAATGGTCAGTCTGAAGGTCAGTATATTGATTATGTTCAACAGTGATTCAGCTCAGGTACTTCTCCCTGCACTTCTCCAGCATCAGGCTTCAAAGTTTGTTGAATATACTTCAGAGgccaaatacagaaaatgtatagcatttaaaaatttacCCTTCTCGTGCCTAAGAACTCTTCAGCCAAGCCCATTCTGAGACTGTCTGACCTCTCAAACAATGGTCTCCCTTGATTTTATGTGAAGGACTTAAGATTTGTATCTGAGAAAGACAGGGCTGAAGGTCTTCTGTACCTATTTGAAGGTCttctttctacatttttaagAATCTATTAATGACCAGTTGTTGTGAAGATGTAAGAGTGGTTTGTTTTGGTTTACTTCAGCCGAAGCCTTTAGTTGTTGGTGAACCTTTCATCTATATCTTCTGAATGAGTCTGGCCCATTCACTACAACTTGACTCTTTTTTCAGAAAACATGTCCAAAGGTCCTTCTATCAGCTCTTGTACTCTGTACTACTCACTGAAGATAGTGTTCTATACGTGTAGGATTGTACAATGCTGAGTTACTAATTGCCACTGGGGCCATGCAAGTCCAACAGTTACAACTGCATTCCTTGGTGTAGGTTTCAGAGATTATGGAACTGTTCAGTGTAACTCATAAAACTTAAATTATCTGTGCATTTAATGTAGAAGTAAATACAGGTGTTATCCTAAagagaaatgtacattttgaaaaatctgttattctctcaTTATTGGGAGAAAAGTCCTCATAgtacagtttggtgatttccctTCTCTCACACACCTAATAAACCTGGCAATTAATATCTAATGACTTAAATCAGCTTTGAGCATTAAAATCACCAATCTTTGGAACCCTAACATAAACAGCCCTTTACACTTGgatgaaactttttttctttcaatactaattagatatttttatgttgttgtATATTTAACTAAACTCTTTACTTAAAGGTCTAATGAAAGACATTCATGCATCTATGCCATCTGTGCCTGCGCGagtgtgttctttatttttattttattttatttcatttcattgaaACAAAATATGATCCAGACTAACAGTCAAATGTTTGGACACACAGGACTGAATATACATGTTTCATTCTCTGAAAGATCTTGTTAAAAGCTTATGATTCGAATttgttcactcactcactttcagtaaccgctttatcccgGTCAGAGTTGTGGTCGATCCAATGTCTATCCAGgtgtgagacaggaatacaccctggatgagatgccaagacaccatgcacacacattcacacactcctaggggcaatttagtggcAAAttcagccaatccacctactggcatgtttttgggaggtgggtggAAAACAGAGAATGAACACAAAACCCACATGAAgttttaaatgcaaacaaatagtTTTTATAATTAAACTGCTTCAgcatacaagtttttttttttcgaactTCATAAGATGTTTCATATTGttgagaatttaaaatataaagttttttttctttatttttgtttttcatggtCACTGCATAATTCCACCTCCATTCCATGTGTTACTTaattgtgttaatatttaatagtagATATGTGTCCAAATTTTTGATGGGTAGAAATTGCAGGGTTTTATTGACTGTAAATTTGCAAAGTAATAATACAATTCATGCTAAACACTAATTTCGACAGATAATCTGACAGAATAACGTACCATCTAATGGTAAGCCACATAAGACATAAAAAAGAGATCATGTGCCAACCAGCATTTTTAAATTGGTGCATGgggtttggaaaactgactgcTCTTTCTTACTGAAAGATTCAGAAAGGCATCAGGTTCCATTAAAAGATAATAATTAATGCTCTCCTGCAAGCATGTTGAAGCGCTCAGAAATGATGTATTATATCCATAGCAGTAAACTGATTAATGCTCTCCTGCAAGGATGTTGAGGCACTTCGGAATGGTGTATTATTATAGCATACCATAGCAGTGGTATTGAAGTAATAGAGCAGATGACTAAATTGAGtgtaatgaaaaaagaaaaaaaaaaacccaaacaaaaaacataacaacCACATTACATTTCTCCATAAGTGACATTATGGACATTTTggtaattactattattaactcagtctcagtgtttttaaaagaaatcttCTAAATCCAAATACTTCCACTTGTTTTGCACATTGTAACCCCCTCTTTAAGCACATTCTCATACTGAGAACCTCAATTAAACATTAACTAccttgttgttttcttttagcCCTTTACCTCCACTGCAACTCTTGAGCAGGACATTTTGTTTGTGCCACTGGAAGACCTGAGGATCAGCACCGTGTTACATCACAGATTGTGCAAACAAGCTTATCAGTGTTTTGCACTCTTGTATGAAAGCTACATGCAAAATGCGAACCAaaccgtttttttttaaatactaaaataattaTTGGTGCAGGCCCAAGAAAATATTGCAAGCCAGGAATAGAGGCAGTAAAATTACTTATTTTACTGTACTAATTAGATGTGCTAATTACACTACTAGAGAAATACCCCCATTGCAAACGGTAAAGGAGGTGTAGCGAGTTTTCAAATAGGTCAGTCAGTCCCCTAGCCATGTGTTGCTATTTCTCTCTGATGCATGCGCTCTCTGATGCATATTATATCCTTATCATTTTGTTATCACTGCTGTTCTTCCTTTCTGCACTCCTCTGGCTCCTCTGTGCTGTGGTACTGGAAGTCTGGGAGATTAATTAATGACTGCTAGACTTGACTGCATTAACACTATTAGAGCAGTCACACATTAACATCCACCTGGCATCTGCAAGAGCTGACGTAGTTGGAAGTGCGATGTGACGTCTATAAAAGCTAAGAAAAGTCAGTTGAGCAACAGCGGTCCATGTGGGACACTGGATGCTGAGCATGTTAACGGATGTTAGGACACTTCTTTAGTCACAACAAGGGTATGTTTTCTCATTTGCCATTACTTTTCTTTTACAGTGACCAGGGATTTGAAACATTACAGGGAACGAAAA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0004346 glucose-6-phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026915156.2 True 4361 mRNA 0.40 5 6747052 6752732

Neighbor

gene id symbol gene type direction distance location
kat7b kat7,LOC108443263,LOC107598609,LOC107739754,LOC107708935,LOC107654043 coding downstream 6470 6727581 ~ 6740582 (-)
dlx4b LOC108274309 coding downstream 100478 6637355 ~ 6646574 (-)
abi3b LOC108273397 coding downstream 233967 6507850 ~ 6513085 (-)
LOC113527434 tnks2,LOC108274191,LOC108431390,LOC107654041 coding downstream 242323 6465015 ~ 6504729 (-)
tbc1d12b tbc1d12,LOC107708937,LOC107743959,LOC107664632,LOC107654040 coding downstream 286693 6437679 ~ 6460359 (-)
aarsd1 aarsd1,LOC107695514,LOC107739756,LOC107708900 coding upstream 4053 6756785 ~ 6766100 (-)
a1cf a1cf,LOC107695528,LOC107708930,LOC107654048 coding upstream 83705 6836437 ~ 6847966 (-)
pcdh15b pcdh15b,pcdh15,LOC107695531,LOC107654051,LOC108273410,LOC108411428 coding upstream 294839 7047571 ~ 7232075 (-)
ube2d1b ube2d1,ube2d1b,LOC106607701,LOC105891213,LOC107717106,LOC107553913,LOC107733527,LOC105010549 coding upstream 669234 7421966 ~ 7427834 (-)
zgc:171971 LOC108273425 coding upstream 682777 7435509 ~ 7442712 (-)
G192014 dlx3 non-coding downstream 124409 6621470 ~ 6622643 (-)
G192012 NA non-coding downstream 200799 6545032 ~ 6546253 (-)
G191947 NA non-coding downstream 258313 6463488 ~ 6488739 (-)
G192070 NA non-coding upstream 37134 6789866 ~ 6790153 (-)
G192061 NA non-coding upstream 43379 6796111 ~ 6796506 (-)
G192062 NA non-coding upstream 46910 6799642 ~ 6800076 (-)
G192075 sgms1 non-coding upstream 55473 6808205 ~ 6809758 (-)
G192074 NA non-coding upstream 60433 6813165 ~ 6815435 (-)
itga3b itga3 other downstream 152662 6546941 ~ 6594390 (-)
LOC113527291 LOC108274042 other downstream 955782 5768528 ~ 5791270 (-)
G191430 NA other downstream 1133098 5611120 ~ 5613954 (-)
gdpd3b gdpd3 other downstream 1256127 5484691 ~ 5490925 (-)
LOC113527048 LOC108274181 other downstream 1683634 5059498 ~ 5063418 (-)
ipmkb ipmk other upstream 647268 7400000 ~ 7418378 (-)
ccdc6b ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 other upstream 828618 7581350 ~ 7595881 (-)
ank3b ank3,LOC107746453,LOC107654059 other upstream 848486 7601218 ~ 7767512 (-)
si:dkey-94l16.4 LOC108273749 other upstream 2094930 8847662 ~ 8857748 (-)
LOC113527700 shisa6,LOC108273473,LOC108424875,LOC107706559 other upstream 2615485 9368217 ~ 9419487 (-)

Expression


Co-expression Network