LOC113527434 (tnks2,LOC108274191,LOC108431390,LOC107654041)


Basic Information

Item Value
gene id LOC113527434
gene name tnks2,LOC108274191,LOC108431390,LOC107654041
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 6465015 ~ 6504729 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026915245.2
cagtagcagcagtagcttCAGCTTCATGTCAGGCgtgtttggtgtgtttgtgtgggagGAAGAGAAGAGCAGGAACACTGGATGAGAGGAGCACCAGGGCAATTTGGTTTCAAATCTCTTCAGTCACTCATGCACTGAATTGTCATTAATGACAGCTCGGGAGCGTGTTTTGCTTAGCAGGAGTGCTGGAGTAGCGCTAGCGTCTCTTAGCCGTGTGTAGCCGCGCACTGCATAACGACGAATGGACACTAGCTTTAGCATTTAGCTCAATAATGAGCGAGCTGAAGCGGAGGTAGCTGCTTAGCGTCTGGAGGAGAAAGCGGACCTTCTTCAGGCTCCGGCTCCGGCTCGGGCTCAGTGCTCGGTGTTTCCCGTGTTGACTCGCGGTGGTTAGAGGATGTCGCTGCGGCGCTGCTCGGCTCGCTCCGGCTCCACGGCGGTGCTGGAGCCGACTGCGGGCAGGGAGCTGTTCGAGGCCTGCCGAAGCGGAGAGCTGGAGCGGGTCAAGAAGCTGCTCAACGCCGAGAATGTGAACAGCAGAGACACCGCGGGCCGCAAGTCCACCCCGCTGCACTTCGCCGCCGGATTTGGCCGTAGAGATGTAGTGAGCTACCTGCTGCAATATGGAGCTAATGTTCATGCCCGGGATGATGGTGGCCTCATCTCACTCCACAACGCCTGCTCGTTTGGCCATGCTGAGGTGGTCAACCTGCTACTGCAGCACGGAGCAGACCCTAACTCCAGAGACAACTGGAACTACACCCCTCTCCACGAGGCGGCTATCAAGGGCAAGATCGACGTCTGCATCGTTCTGCTGCAGCACGGAGCTGAGCCGAGCATCCGAAACACCGACGGCAGGACGGCCCTGGACCTAGCCGAGGCCTCCACTAAGGCAGTCCTGACCAGAGAGTACAGAAAAGACGAACTTCTGGAGAGTGCAAGGAGTGGAAACGAGGAGAAGCTGATGAGTCTGCTCACTCCTCTGAACGTAAACTGTCACGCCAGTGATGGAAGAAGGTCGACCCCCCTGCATCTGGCCGCAGGCTACAATCGAGTGAAGACAGTGCAGCTGTTGCTGCAGCACGGCGCTGACGTCCACGCTAAAGACAAAGGCGATCTGGTGCCTCTCCATAACGCCTGCTCATACGGCCATTATGAGGTGACTGAACTGCTCGTGAAGCATGGTGCCTGCGTTAACGCAACAGACCTGTGGCAGTTCACGCCGCTGCACGAGGCGGCCTCCAAGAACCGCGTGGAGGTGTGTTCCCTCCTGCTGAGCCACGGAGCCGACCCCACCTTCCTCAACTGCCACAACAAGAGCGCCATCGACCTGGCGCCCACCGCCCTCCTCAAAGATCGCCTGGCCTATGAGTTCAGAGGTTACGCTCTACTTCAGGCAGCGCGTGAGGCCGATCTCTTCCGCCTTAAAAAACACCTCTCGCTGGAGACCATCAACTTCAAACATCCCCAAACCCATGAGACAGCTCTGCACTGCGCCTCTGCCTCACCTTATCCTAAGAGGAAGCAAGTGTGTGAGATTCTGCTGAGGAAGGGCGCCAATATAAACGACAAGACAAAAGACCTCCTGACGCCACTGCATCTCGCTGCTGAGAAGTCCCACAATGACATCATCGAACTGTTAGTGAAGCACGAAGCCAAAGTCAACGCGGTGGACAGTCAGGGGCAGACGCCGCTGCACAGGGCCGCTCAGTGTGGACATCTGCAGAGCTGCAGACTGCTAATGAGCGCTGGCTCGGACCCGCTCATCACCTCACTGCAGGGCTTCACACCCTCCCAGCTCTCCAAAGACACCATCCAGGACATACTGCAGGAAGGAGTGCTGGCAGGGAATTTGGACACAGAAAGGCAGCTGCTGGAGGCCTCCAAGTCAGGAGACCTGGAGACTGTAAAGAAGCTGTGCACACTACAGAATGTGAACTGCAGGGACGCAGAGGGACGTCAGTCCACACCGCTGCACTTTGCAGCTGGCTACAACCGCGTGGCCGTGGTGGAGTACCTGCTGCAGCACGGTGCTGACGTACACGCTAAAGATAAAGGAGGCCTGGTTCCGTTACATAACGCATGCTCATATGGACACTACGAGGTGGCGGAGCTGCTGGTGATACATGGTGCTGTGATTAACGTGGCCGACCTGTGGAAGTTTACGCCGTTGCACGAGGCTGCCGCAAAGGGCAAGTACGAGATCTGCAAACTGCTGCTTCAGCATGGTGCAGATCCAACCAAGAAGAATCGTGATGGGAACACGCCTCTGGACCTGGTGAAGGAGGGGGACACAGATATCCAGGACCTGCTGAGGGGAGACGCTGCGCTGCTGGATGCTGCCAAGAAAGGCTGTCTGACCCGGGTGAAAAAACTCTGCAGCCCAGGCAACGTCAACTGCAGGGACACACAGGGACGCCACTCCACACCGCTCCATCTGGCAGCTGGTTATAATAACCTGGAGGTGGCGGAGTATTTGCTGCAGCATGGCGCAGAGGTGAACTCACAGGACAAAGGAGGTCTCATTCCTTTACATAACGCTGCTTCCTATGGGCACGTGGACGTGGCTGCATTGCTCATCAAGTACAACGCATGCGTCAATGCCACTGATAAGTGGGCGTTCACTCCGCTGCATGAGGCTGCTCAGAAAGGGAGGACGCAGCTGTGCGCACTGCTGCTTGCACACGGTGCCGATCCTACACTGCGCAACCAGGAAGGCCAGTCGCCGCTGGACCTTGTGACGGCCGATGATGTGCGCGCCTTGCTGACCGCGGCCATGCCGCCATCTGCATTGCCGGCCTGCTACAAGCCGCAGGTCATCAGCGTGTCAGCCTCCGCTGGCGTGGCGACGTCTGACCACTCCTCTGGTGCTGGCTCCACCCCCCAGCCCTCCACCTCAGGTTTGGAGTCACAGGATGGCCACTTGCCCGAGCTGCTGGGGCCATCAGGGGGCGAGGGAGCTGTGGGAGTGGAGAAAGCCGaggaggGTGCAGCCTTGGAATTGAGTATCAGCCAATTTCTTCATAAGCTTGGATTGGAGCATCTTCTGGAGATCTTCGACCGAGAACAGATAACTCTGGACGTGCTGGTGGAAATGGGGCACAAAGAGCTGAAGGAGATCGGCATCAACGCTTACGGCCACAGACACAAGATCATCAAAGGAGTGGAGAGGTTCATTACCGGACCTCAGAGTTTGAATCCCTATTTAACTCTGAACACGGCCAACAGTGGAACTATACTGATTGATCTGGCCTCGGACGATAAGGAATTTCAGTCGGTTGAAGAGGAGATGCAAAGCACAATTAGAGAGCACAGAGATGGTGGTCACGCCGGAGGAGTTTTCAACAGATACAACATTGTAAAGATCCAGAAGGTGTGCAATAAGAAGCTGTGGGAGAGATACACACATCGCAGGAGGGAGGTGTGAGAGAACCACAATCACTCCAACGAGCGCATGCTGTTCCACGGTTCTCCATTCGTAAACGCCATCATCCACAAAGGCTTCGACGAGAGACACGCCTACATCGGAGGCATGTTCGGGGCCGGGATCTACTTTGCCGAGAACTCCTCCAAGAGTAACCAGTATGTGTATGGTATAGGAGGAGGCACTGGGTGTCCTCTTCACAAGGACAGGTCGTGCTACATGTGTCAGAGGCAGCTGCTGTTCTGCCGCGTAACTCTTGGGAAGTCCTTCCTTCAGTTCAGTGCCATGAAGATGGCTCACTCTCCACCGGGGCACCACTCGGTGTCAGGCAGACCCAGCGTCAACGGCCTCGCCCTCGCCGAGTACGTCATCTACAGAGGAGAGCAGGCTTATCCTGAATATTTGATCACCTATCAGATTATCAAACCGGATGGGAGTATGGATTAAGACCCCGACTCTTCAGAAAGGACTGTTTTGCACACTGCATGCACATTCTCATTAATACACTGTATAGAAATGTTTCGTTCCATCTTTTCTACTTTCCTTCCTTCGCACTTGATATTTATCATGTTAAACAGTTAACCGTCTACTCAACGTGTGCACTGATAACTGTCCTTTCCGCAGCAAAAGACCTCATACAGTCAGTCGCTACCACTGTAAATCCAGTTTTCAAGAAGCCTAATGCATCACAAATGtggcttatttattttacacaactGTAAGacaactgtatatatttttttttgtaccagcATGTCGATTTATTGATATTTGTATTATAAAGATTCTATGCTTGGATGATGTATTGTATAAAATCTATGCCAGTTTCAGAGGTACTTTTGGTTCGGAGGTAATCCGGTTAAAGCTACAGGatgtaagattttggaatttcaccctctctggggggaaaaaaaactttgcagGCTACTTGTGGAACATTTCGTAATGTGGGTCGGATTAATCTCGTGGCTGCGAGTGCCAGGTCATACGCATTCAGATAAGTTGTACGGCTAAATAACACCAATGACGCTCAAGTATTTGTGACTCTCAGGATATCGGTATCTGCTCTTATCGTCGTCTGCTGAAGTTTACAGAAGTGCGTGAGCGCAGGGTAAATGCGGAGTGATCAaactctagctagctagctgaaatATAGTGTAGAGAGCAAACCTATAAAAAGTGGCCAATTATTtatcaaaactgaaaaaaacatttggcaGGAACCAGATAGTGTAAGCATGCTAGCTAAAACCAACATCAGATGATCAAGAGATGGTGAGCCGAGCCCTTAAATCACTCTCGTCTGATATATCCGAGTTCGAAATACAGAAATACGGAGAAACCCAGAAACGCCTCCTGTAGGTCTATAGTACTCTAGATTAACTAGCTTTGCAACTGGCTAATGATACAAACTACGCAGCAAGGATAAATAAGCttagtctttctctctctctctctcgtgatTGGCTGCCAGCTCCAGTCTGTGACCCCGTAGCCAGACTTCTTTTGTGCCTAAAGTTAGGCATGATGACGTTTACGTATCTTAGCTGGCGTGTCATGTATGTGTACAGATTTGCAGCCGATTCCGATCCGACATGCGATTACAGGATTATCAGGGTGACTCacagctcaggaacatcatatTATACAGAATTTTATTGTCCCCTTAGTCAGCGATTTTATTTCCTCCAAAAATCCtacacactgtagctttaaataCCATGGCTAAAGCAAGAAACATCACTAATTATTCTTACACAGTTATGGCATTAAGCCAAACGTTCTTGGTGTCAGCTTCATTCCATTTCAGTGGTGCTGTTCTCTGTTACATGTCCTGCACATAGACAGGATGGATATTTGTCAAGGACAATctcaaaattataaaaaaaaaaaacagagaatttAAACTCGTGTACCAGGGGACGGAGGAAATGGAGCATATTCTGCATTTCAGTATTGTTTTAATGCACGTTCAGCATTTCCTCTTGGCTGCTGGTTCAGCATTTTCTTCGCTTTTACCAACAGCAGAATTTACTCACAACACACTCGCCCTGCGTAGCATCAAGTAAATTATATATGAACGTATATAATATGAGCACCTGATTCATGAAAATGGTGCACGTGTTGTTagttatttaaacacaaattatgaatcagcttcagctgcaTGGACGCTAACTCCCACCCACTGGGCTCTGATTTACGTGTCATTTGCACAACATGCCTCAGTTTAatctaatatacagtactgtgcaaaagtcttaggcacatacaaagaaatgctgtagagcaaagacgccttcagaaagaatgaaattaaatgtttctacattgaaaaaaatact

Function

symbol description
tnks2 Enables NAD+ ADP-ribosyltransferase activity; enzyme binding activity; and protein ADP-ribosylase activity. Involved in several processes, including protein ADP-ribosylation; protein localization to chromosome, telomeric region; and regulation of telomere maintenance. Located in nuclear envelope; pericentriolar material; and perinuclear region of cytoplasm.

GO: NA

KEGG:

id description
K10799 TNKS; tankyrase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026915245.2 True 5769 mRNA 0.51 28 6465015 6504729

Neighbor

gene id symbol gene type direction distance location
tbc1d12b tbc1d12,LOC107708937,LOC107743959,LOC107664632,LOC107654040 coding downstream 4656 6437679 ~ 6460359 (-)
noc3l noc3l coding downstream 29009 6417476 ~ 6436006 (-)
fra10ac1 fra10ac1,LOC108274300,LOC107654038,LOC107743956,LOC107664625,LOC107557362 coding downstream 165036 6285060 ~ 6299979 (-)
rbp4 rbp4 coding downstream 194381 6268873 ~ 6270634 (-)
LOC117598588 LOC108273543,LOC108262318 coding downstream 300081 6163064 ~ 6164934 (-)
abi3b LOC108273397 coding upstream 3121 6507850 ~ 6513085 (-)
dlx4b LOC108274309 coding upstream 132626 6637355 ~ 6646574 (-)
kat7b kat7,LOC108443263,LOC107598609,LOC107739754,LOC107708935,LOC107654043 coding upstream 222852 6727581 ~ 6740582 (-)
g6pca.1 LOC108274343 coding upstream 242323 6747052 ~ 6752732 (-)
aarsd1 aarsd1,LOC107695514,LOC107739756,LOC107708900 coding upstream 252056 6756785 ~ 6766100 (-)
G191788 NA non-coding downstream 169222 6293530 ~ 6295793 (-)
G191786 NA non-coding downstream 174103 6290411 ~ 6290912 (-)
LOC117598466 NA non-coding downstream 203417 6259865 ~ 6261598 (-)
G191772 kif22 non-coding downstream 212833 6251422 ~ 6252182 (-)
G191763 NA non-coding downstream 244634 6219812 ~ 6220381 (-)
G192012 NA non-coding upstream 40303 6545032 ~ 6546253 (-)
G192014 dlx3 non-coding upstream 116741 6621470 ~ 6622643 (-)
G192070 NA non-coding upstream 285137 6789866 ~ 6790153 (-)
G192061 NA non-coding upstream 291382 6796111 ~ 6796506 (-)
G192062 NA non-coding upstream 294913 6799642 ~ 6800076 (-)
LOC113527291 LOC108274042 other downstream 673745 5768528 ~ 5791270 (-)
G191430 NA other downstream 851061 5611120 ~ 5613954 (-)
gdpd3b gdpd3 other downstream 974090 5484691 ~ 5490925 (-)
LOC113527048 LOC108274181 other downstream 1401597 5059498 ~ 5063418 (-)
G191056 taok2,LOC108273910 other downstream 1512156 4949163 ~ 4952859 (-)
itga3b itga3 other upstream 42212 6546941 ~ 6594390 (-)
ipmkb ipmk other upstream 895271 7400000 ~ 7418378 (-)
ccdc6b ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 other upstream 1076621 7581350 ~ 7595881 (-)
ank3b ank3,LOC107746453,LOC107654059 other upstream 1096489 7601218 ~ 7767512 (-)
si:dkey-94l16.4 LOC108273749 other upstream 2342933 8847662 ~ 8857748 (-)

Expression


Co-expression Network