antxr1c (antxrl,antxr1c,LOC108437311,LOC106589351,LOC105893913,LOC107693662)


Basic Information

Item Value
gene id antxr1c
gene name antxrl,antxr1c,LOC108437311,LOC106589351,LOC105893913,LOC107693662
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 4731130 ~ 4750850 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026915253.2
ACTACTAAATCATGAGTTATCAGTCTGACTGGTGGTGGCGTTGATGCTgaaagaaatgatgaaaaatccTGAAAAGTGGCAGGCCATTTTTTCTGCAAGGGTCGAAATATGACACCaggtctctttctttctgcaaGACCTTGCCTCTGCACTCATTTTGTTGAGAGAGTTACACGTCTTTGCTTCGCGTTAGCATCGTTAGCGTCAACGTCGCGTAAAGAAAGCGTTTCCTTTGAGCTCTAAACCCACTTTATTTGACTTAAACACACAGTGGGAGATTTTTTAAGCTGCCCTTTTTTGGTATTTTCTCTGTGAGTTTCTCAGCATTACAGTGCCAGTAAGGCGCTAACGTTTTCTCACCACAGCCGTCGACGTTTCAGTCAAAGGAGGAGCGCTACATCTGTGAACTTCTGGGGAATCTCGTTCATCCTCTAATGAGAGGAAAAGACGGACTCAACATCCCTCAGGGTTCTTTGTGTTTCatcttttttcctcaccacGTCCCgggtttttccttttttcacgAGAATACCGAGGATAATGTAAAATCGGCTTGTTTTGCTGAGGAGTGATTGTTTTTGCGCGACTAAAGCTAAGGATGGCGAGCTCTTTGAAGAATGCGGGTCTCGCGCTGTTTGTTTTTGGGATCTTGTTTTTCCTCGGCAGTGGTGGGGCAGAGGGGCAGGAGGAGGACCAGGAGAGGTCTTGTCAAGGTGCCTTCGACTTGTACTTTGTCCTTGACAAGTCAGGAAGTGTCAAACACCACTGGCATGAGATCTACTCTTTTGTTGAGAGTTTGGCTGAGAAATTTATCAGCCCCTTGCTTCGAATGTCCTTCATCGTGTTTTCATCCAGAGGAAACACAATCATGAGACTGACAGAAAACAGggAGCAAATAACCAAAGGCCTGAATGTCCTCAGAAGGGAAATCCCAGGAGGAGACACATTCATGCACCTTGGCCTGCAAAAGgcaaatgaacaaatttatcAGGAGAATTTTGgCAAAGCAAGTGTGATTATTGCATTAACGGATGGGGAACTCAATGAGCAGCCGCTTATAGAAGCACAACAGGAGGCTGCCAGAGCCAGAGCATTGGGTGCCATTGTGTATTGTGTCGGAGTGAAAGATTTCAATGAGACGCagCTCGCTACCATAGCTGACACCATTGAGCACGTGTTTCCTGTGACAGGAGGATTCCAAGCGCTTAGAGGCGTGATTGACTCGATCATCAGGAAATCCTGTATTGAGATCTTGGCAGTTGAGCCATCCAGTGTATGTGCAGGAGAGTCGTTCCAAGTGGTGGTTCGAGGAAACGGCTTTTTGCATGCCAGAAAAATAGACCAGGTGTTGTGCAGCTTCAAAATCAACGATACCGTCACCTTAAATGTGCGGCCTGCTGATATAGAAGACACATACATGCTGTGTCCAGCGCCAAGTATAAACGAGGTCGGAAAGGTGGTATATCTGCAAGTAAGCATGAACGAAGGTCTGTCGTTCATCACCAGCTCAGTACACATAACCACAACTGAGTgtTTTGATGGTACTATTCTTCTGATTACCCTGCTGGTCCTGTTCCTGTTGTTGGCTCTGTTGTTCATGTGGTGGTTCTGGCCCCTGTGCTGCACAGTAGTTATCAAAGAGccccctccacctccacccccACAGCCAGAGTCAGACGATGAAGACGGTATGCCAAAGAAAAAATGGCCAACTGTAGATGCCTCATACTATGGGGGACGGGGAGTTGGAGGAATAAAACGAATGGAGGTCCGCTGGGGTGGGAAGGGGTCCACTGAAGAGGGTGCCAAGTTGGAGAAACCCAAAAATGCAGTTGTGAAAATGCCTGAGCAGGAGTTTGAACCCTTTGAACCCAAGCCtaaaaaacaaggaaacaagAAGCCTCCCCAAAATAGGAAGTGGTACTCCCCGATTAGGGGTAAACTGGATGCAATTTGGGCTCTGTTTCGCCGTGGTTATGACCAAGTTTCACTTATGAGACCACAGCCTGGAGATCACGGCCGATGCATCAACTTCACCAGGGTGAAAGAGGAGGCAGCAAAGGCCCCATCCTGTGCCCAAAGCCCACCCCCACCTCCTCCTGACTACTGCCAGGCACCACCCCCTGTAAGTCCACTTCCTCAGTGTCCACCCCCCAGAGGACCCCCCGTGGCCCCAGGTCCACCTCCTGCCCGAGCTCCGCCCACTGCTCCATGTCCGCCTCCTGCTCGACCCCCTCCCAAACCCTGAGATCCAACATTAAGAGCATCAGATTGATTTTCCAGCTAAAATATGCTCCTCTCACCAAAgaataatacacacaaaaatatttatcagCGTCAGATAGCCTATAGTATGTGCTTTGTTGCtggacagcaaaaaaaatattgtaacaaTATCAACAAATGCAATAAAGGAAAGATGCTAATATCAACTACTGAATATACCACAAGTGGCAGAGACAGTATAGGGTACgtattttttttgccttttagaaaaggtaaaaaaaaaaaaaaaagatccccTCATTTTCATCGCCTTTAAGCTCACCTACAgctaaaaataatgaaacaatacAATCAATCAGGTTCTCATGCTGTCAGCCATGAGACAGTGTTTGATCACATCTTCTCTTTTTGTCCAGTGGTTATAAATGAAAAGATGGGATTTGATAAAGCATGAAAATAGCACATTTTTGGGCATTTTGCCATCATATTATTGGTCCCATCATGCTCTtagaaatgaattttaaatcattcatttacTGCATACTCTCTCAGGTTAGCGTCTCGTTGTGTTGATCAAAAGAAGAACATGTATTGCAAGTTATGATCATGCAAGAATAAATGCAAGTTGCACAGGTGTAGTGTGTCTCCAAAGTTTTGATATCATGTTTTATCAAAAGGTTTGTCAGGCTGATGCTTTTTGGTACGTTGTGAAATCTAGGGAGAAGCTGTACAAGTTTGTTGCCTGCAAATGAGGAATTGTTGAGGAGCTGTAAGTTTAGAAATGGAGTGGTCCAGTTATAGCTTTGTTGCATATGGTGTGTGttctttgctttttcatttGATTGTAAATCCTCATAATGTATGCAGACAGGGCAGTATTTCTCATCATATTTGTATGTATCATATTCCCAcaactgtactgtattttcaaGTGCATCCTTTGTGTCCTTTTGTAACACCATTGAACACATCATGACTGCAGGGCAGTTGACAATATCTAATTTATTATTCCCCCCAAGCAAGAGTGAGTTACTTGAATACGACAAGGTGTCCgctgtaaaaagaaaaacaggacactGTGCATGTAATGATCCAAAGAAATCCCTTTCTATGCTCctcttctacttttttttatttttcttgttatttcaaTCTGTTATATGAATTTGTTTTTGTAGTTCCCCCAGATGTGATTAATTTAATCTGACAAAGTgcctgtgttttgtttaaaaaaaaaaaaaagaagcactttTACATGTAAATTTGTGTTTGACAATAATTAACTAAATAAGCAGTGTGTTTTTAATGAGGCAATTAGGAACATTTCTCTCATTTACTACAaaccacattttctttttattggcCTTCTGTGTGACAGTTATTTGACAGTGTGAGATGTAATAAGCCATCGTAATATTGTCTTTCTACTTCGTATTGCCTATTAACAGCGATATTGATGCATCTAGTGAAAGGCGCATAAACTGTTCTCTTTTTATACACTATCAATAAAGGTCATTTTCCAAGCTTT
>XM_026915254.2
ACACCACTGGCATGAGATCTACTCTTTTGTTGAGAGTTTGGCTGAGAAATTTATCAGCCCTTGCTTCGAATGTCCTTCATCGTGTTTTCATCCAGAGGAAACACAATCATGAGACTGACAGAAAACAGggAGCAAATAACCAAAGGCCTGAATGTCCTCAGAAGGGAAATCCCAGGAGGAGACACATTCATGCACCTTGGCCTGCAAAAGgcaaatgaacaaatttatcAGGAGAATTTTGgCAAAGCAAGTGTGATTATTGCATTAACGGATGGGGAACTCAATGAGCAGCCGCTTATAGAAGCACAACAGGAGGCTGCCAGAGCCAGAGCATTGGGTGCCATTGTGTATTGTGTCGGAGTGAAAGATTTCAATGAGACGCagCTCGCTACCATAGCTGACACCATTGAGCACGTGTTTCCTGTGACAGGAGGATTCCAAGCGCTTAGAGGCGTGATTGACTCGATCATCAGGAAATCCTGTATTGAGATCTTGGCAGTTGAGCCATCCAGTGTATGTGCAGGAGAGTCGTTCCAAGTGGTGGTTCGAGGAAACGGCTTTTTGCATGCCAGAAAAATAGACCAGGTGTTGTGCAGCTTCAAAATCAACGATACCGTCACCTTAAATGTGCGGCCTGCTGATATAGAAGACACATACATGCTGTGTCCAGCGCCAAGTATAAACGAGGTCGGAAAGGTGGTATATCTGCAAGTAAGCATGAACGAAGGTCTGTCGTTCATCACCAGCTCAGTACACATAACCACAACTGAGTgtTTTGATGGTACTATTCTTCTGATTACCCTGCTGGTCCTGTTCCTGTTGTTGGCTCTGTTGTTCATGTGGTGGTTCTGGCCCCTGTGCTGCACAGTAGTTATCAAAGAGccccctccacctccacccccACAGCCAGAGTCAGACGATGAAGACGGTATGCCAAAGAAAAAATGGCCAACTGTAGATGCCTCATACTATGGGGGACGGGGAGTTGGAGGAATAAAACGAATGGAGGTCCGCTGGGGTGGGAAGGGGTCCACTGAAGAGGGTGCCAAGTTGGAGAAACCCAAAAATGCAGTTGTGAAAATGCCTGAGCAGGAGTTTGAACCCTTTGAACCCAAGCCtaaaaaacaaggaaacaagAAGCCTCCCCAAAATAGGAAGTGGTACTCCCCGATTAGGGGTAAACTGGATGCAATTTGGGCTCTGTTTCGCCGTGGTTATGACCAAGTTTCACTTATGAGACCACAGCCTGGAGATCACGGCCGATGCATCAACTTCACCAGGGTGAAAGAGGAGGCAGCAAAGGCCCCATCCTGTGCCCAAAGCCCACCCCCACCTCCTCCTGACTACTGCCAGGCACCACCCCCTGTAAGTCCACTTCCTCAGTGTCCACCCCCCAGAGGACCCCCCGTGGCCCCAGGTCCACCTCCTGCCCGAGCTCCGCCCACTGCTCCATGTCCGCCTCCTGCTCGACCCCCTCCCAAACCCTGAGATCCAACATTAAGAGCATCAGATTGATTTTCCAGCTAAAATATGCTCCTCTCACCAAAgaataatacacacaaaaatatttatcagCGTCAGATAGCCTATAGTATGTGCTTTGTTGCtggacagcaaaaaaaatattgtaacaaTATCAACAAATGCAATAAAGGAAAGATGCTAATATCAACTACTGAATATACCACAAGTGGCAGAGACAGTATAGGGTACgtattttttttgccttttagaaaaggtaaaaaaaaaaaaaaaagatccccTCATTTTCATCGCCTTTAAGCTCACCTACAgctaaaaataatgaaacaatacAATCAATCAGGTTCTCATGCTGTCAGCCATGAGACAGTGTTTGATCACATCTTCTCTTTTTGTCCAGTGGTTATAAATGAAAAGATGGGATTTGATAAAGCATGAAAATAGCACATTTTTGGGCATTTTGCCATCATATTATTGGTCCCATCATGCTCTtagaaatgaattttaaatcattcatttacTGCATACTCTCTCAGGTTAGCGTCTCGTTGTGTTGATCAAAAGAAGAACATGTATTGCAAGTTATGATCATGCAAGAATAAATGCAAGTTGCACAGGTGTAGTGTGTCTCCAAAGTTTTGATATCATGTTTTATCAAAAGGTTTGTCAGGCTGATGCTTTTTGGTACGTTGTGAAATCTAGGGAGAAGCTGTACAAGTTTGTTGCCTGCAAATGAGGAATTGTTGAGGAGCTGTAAGTTTAGAAATGGAGTGGTCCAGTTATAGCTTTGTTGCATATGGTGTGTGttctttgctttttcatttGATTGTAAATCCTCATAATGTATGCAGACAGGGCAGTATTTCTCATCATATTTGTATGTATCATATTCCCAcaactgtactgtattttcaaGTGCATCCTTTGTGTCCTTTTGTAACACCATTGAACACATCATGACTGCAGGGCAGTTGACAATATCTAATTTATTATTCCCCCCAAGCAAGAGTGAGTTACTTGAATACGACAAGGTGTCCgctgtaaaaagaaaaacaggacactGTGCATGTAATGATCCAAAGAAATCCCTTTCTATGCTCctcttctacttttttttatttttcttgttatttcaaTCTGTTATATGAATTTGTTTTTGTAGTTCCCCCAGATGTGATTAATTTAATCTGACAAAGTgcctgtgttttgtttaaaaaaaaaaaaaagaagcactttTACATGTAAATTTGTGTTTGACAATAATTAACTAAATAAGCAGTGTGTTTTTAATGAGGCAATTAGGAACATTTCTCTCATTTACTACAaaccacattttctttttattggcCTTCTGTGTGACAGTTATTTGACAGTGTGAGATGTAATAAGCCATCGTAATATTGTCTTTCTACTTCGTATTGCCTATTAACAGCGATATTGATGCATCTAGTGAAAGGCGCATAAACTGTTCTCTTTTTATACACTATCAATAAAGGTCATTTTCCAAGCTTT

Function

symbol description
antxr1c Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in toxin transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cell surface and plasma membrane. Is expressed in cranial vasculature; spinal cord; tail bud; and trunk vasculature. Human ortholog(s) of this gene implicated in GAPO syndrome and colorectal carcinoma. Orthologous to several human genes including ANTXRL (ANTXR like).
antxrl Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in toxin transport. Predicted to be integral component of membrane. Predicted to be active in cell surface and plasma membrane.

NR:

description
PREDICTED: anthrax toxin receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026915253.2 True 3754 mRNA 0.43 18 4731130 4750850
XM_026915254.2 False 2994 mRNA 0.42 17 4737916 4750850

Neighbor

gene id symbol gene type direction distance location
rbp3 rbp3 coding upstream 5067 4722512 ~ 4726063 (+)
gdf2 LOC108273396 coding upstream 13095 4716066 ~ 4718035 (+)
gdf10b gdf10 coding upstream 16467 4711495 ~ 4714663 (+)
frmpd2 frmpd2 coding upstream 61272 4651720 ~ 4669858 (+)
si:dkey-191m6.4 LOC108274024,LOC108437306 coding upstream 105783 4600300 ~ 4625347 (+)
mms19 mms19,LOC107578808 coding downstream 36916 4787766 ~ 4810533 (+)
prkar1ab prkar1ab,LOC108274040,LOC107693667,LOC108444289,LOC107708993,LOC103038385,LOC107602422 coding downstream 77320 4828170 ~ 4837041 (+)
taok2b LOC108273910,LOC107562015,LOC107693686,LOC107708977 coding downstream 171380 4922230 ~ 4961609 (+)
maz maz coding downstream 211510 4962360 ~ 4972009 (+)
tlcd3bb fam57b,LOC108274141,LOC107708980,LOC107693684 coding downstream 227027 4977877 ~ 4988518 (+)
G190797 NA non-coding upstream 102254 4625619 ~ 4628876 (+)
G190795 NA non-coding upstream 134201 4596690 ~ 4596929 (+)
G190775 NA non-coding upstream 244374 4486523 ~ 4486756 (+)
G190748 NA non-coding upstream 433891 4296393 ~ 4297239 (+)
LOC113527449 NA non-coding upstream 474082 4248183 ~ 4257048 (+)
G190964 LOC108274181 non-coding downstream 308667 5059517 ~ 5063419 (+)
G191026 g6pc3 non-coding downstream 505591 5256441 ~ 5262085 (+)
G191032 NA non-coding downstream 518397 5269247 ~ 5282643 (+)
G191258 NA non-coding downstream 557369 5308219 ~ 5309374 (+)
G191266 NA non-coding downstream 612438 5363288 ~ 5363503 (+)
lrrc18b lrrc18 other upstream 135101 4593107 ~ 4596029 (+)
p4ha1a p4ha1,LOC108273903,LOC107753313,LOC107560551 other upstream 800687 3903347 ~ 3930443 (+)
rasd1 rasd1,LOC107653935,LOC107720458,LOC108412952 other upstream 947521 3781161 ~ 3783609 (+)
lmf1 lmf1,LOC107580192 other upstream 1007887 3697794 ~ 3723243 (+)
LOC113547484 LOC108273453 other upstream 1277704 3430313 ~ 3453426 (+)
G190865 NA other downstream 4247 4755097 ~ 4839369 (+)
gngt2b NA other downstream 552227 5303077 ~ 5304909 (+)
LOC113527051 LOC108274342,LOC108274341,LOC108425932 other downstream 579192 5330042 ~ 5340563 (+)
LOC113527671 LOC108441166,LOC108273636 other downstream 979304 5730154 ~ 5740905 (+)
G191581 NA other downstream 1218893 5969743 ~ 5983237 (+)

Expression


Co-expression Network